RNA–Protein interactions for RNA: ENST00000618278.4

SLC6A6-207, Transcript of solute carrier family 6 member 6, humanhuman

TSL 5

Gene SLC6A6, Length 6,401 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-207ENST00000618278 KCNH8Q96L42 1107 aa14.86□□□□□ -0.03
SLC6A6-207ENST00000618278 ZRSR1Q15695 479 aaKnown RBP14.84□□□□□ -0.03
SLC6A6-207ENST00000618278 NAP1L2Q9ULW6 460 aaPredicted RBP14.83□□□□□ -0.04
SLC6A6-207ENST00000618278 WDR43Q15061 677 aaKnown RBP eCLIP14.82□□□□□ -0.04
SLC6A6-207ENST00000618278 TMC1Q8TDI8 760 aa14.82□□□□□ -0.04
SLC6A6-207ENST00000618278 TMX4Q9H1E5 349 aaPredicted RBP14.8□□□□□ -0.04
SLC6A6-207ENST00000618278 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
SLC6A6-207ENST00000618278 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
SLC6A6-207ENST00000618278 LAS1LQ9Y4W2 734 aaKnown RBP14.76□□□□□ -0.05
SLC6A6-207ENST00000618278 MLECQ14165 292 aa14.76□□□□□ -0.05
SLC6A6-207ENST00000618278 PDE4CQ08493 712 aa14.75□□□□□ -0.05
SLC6A6-207ENST00000618278 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
SLC6A6-207ENST00000618278 KLHL34Q8N239 644 aa14.75□□□□□ -0.05
SLC6A6-207ENST00000618278 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.75□□□□□ -0.05
SLC6A6-207ENST00000618278 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
SLC6A6-207ENST00000618278 CHIC2Q9UKJ5 165 aa14.74□□□□□ -0.05
SLC6A6-207ENST00000618278 G3V3G9 751 aa14.74□□□□□ -0.05
SLC6A6-207ENST00000618278 DCAF8Q5TAQ9 597 aa14.74□□□□□ -0.05
SLC6A6-207ENST00000618278 SOX12O15370 315 aa14.73□□□□□ -0.05
SLC6A6-207ENST00000618278 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
SLC6A6-207ENST00000618278 ZNF330Q9Y3S2 320 aaPredicted RBP14.73□□□□□ -0.05
SLC6A6-207ENST00000618278 OS9Q13438 667 aaPredicted RBP14.71□□□□□ -0.06
SLC6A6-207ENST00000618278 FKBP8Q14318 412 aa14.7□□□□□ -0.06
SLC6A6-207ENST00000618278 CHMP7Q8WUX9 453 aaPredicted RBP14.69□□□□□ -0.06
SLC6A6-207ENST00000618278 NBR1Q14596 966 aa14.69□□□□□ -0.06
SLC6A6-207ENST00000618278 FGD1P98174 961 aa14.67□□□□□ -0.06
SLC6A6-207ENST00000618278 TRIM44Q96DX7 344 aaPredicted RBP14.67□□□□□ -0.06
SLC6A6-207ENST00000618278 MSH5O43196 834 aa14.67□□□□□ -0.06
SLC6A6-207ENST00000618278 CNKSR2Q8WXI2 1034 aa14.65□□□□□ -0.06
SLC6A6-207ENST00000618278 TSPY4P0CV99 314 aa14.6□□□□□ -0.07
SLC6A6-207ENST00000618278 TSPY10P0CW01 314 aa14.6□□□□□ -0.07
SLC6A6-207ENST00000618278 MEX3CQ5U5Q3 659 aaKnown RBP14.6□□□□□ -0.07
SLC6A6-207ENST00000618278 CSB-PGBD3P0DP91 1061 aa14.59□□□□□ -0.07
SLC6A6-207ENST00000618278 EIF4G2P78344 907 aaKnown RBP eCLIP14.59□□□□□ -0.071e-7■■■■■ 35.2
SLC6A6-207ENST00000618278 PLCB2Q00722 1185 aa14.59□□□□□ -0.07
SLC6A6-207ENST00000618278 POGKQ9P215 609 aa14.59□□□□□ -0.07
SLC6A6-207ENST00000618278 KCNJ4P48050 445 aa14.58□□□□□ -0.08
SLC6A6-207ENST00000618278 PTMAP06454 111 aaKnown RBP14.57□□□□□ -0.08
SLC6A6-207ENST00000618278 CASC1Q6TDU7 716 aa14.57□□□□□ -0.08
SLC6A6-207ENST00000618278 WWC1Q8IX03 1113 aa14.57□□□□□ -0.08
SLC6A6-207ENST00000618278 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
SLC6A6-207ENST00000618278 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
SLC6A6-207ENST00000618278 RGL3Q3MIN7 710 aa14.54□□□□□ -0.08
SLC6A6-207ENST00000618278 TONSLQ96HA7 1378 aa14.53□□□□□ -0.08
SLC6A6-207ENST00000618278 HNRNPUQ00839 825 aaKnown RBP eCLIP14.53□□□□□ -0.08
SLC6A6-207ENST00000618278 VPS53Q5VIR6 699 aa14.52□□□□□ -0.08
SLC6A6-207ENST00000618278 CWC22Q9HCG8 908 aaKnown RBP14.52□□□□□ -0.08
SLC6A6-207ENST00000618278 TNNT2P45379 298 aaPredicted RBP14.52□□□□□ -0.09
SLC6A6-207ENST00000618278 DNTTIP2Q5QJE6 756 aaKnown RBP14.52□□□□□ -0.09
SLC6A6-207ENST00000618278 NEUROD2Q15784 382 aa14.51□□□□□ -0.09
SLC6A6-207ENST00000618278 GNL2Q13823 731 aaKnown RBP14.48□□□□□ -0.09
SLC6A6-207ENST00000618278 CCDC136Q96JN2 1154 aa14.47□□□□□ -0.09
SLC6A6-207ENST00000618278 ERICH6BQ5W0A0 696 aa14.47□□□□□ -0.09
SLC6A6-207ENST00000618278 NOC3LQ8WTT2 800 aaKnown RBP14.47□□□□□ -0.09
SLC6A6-207ENST00000618278 CFAP53Q96M91 514 aa14.46□□□□□ -0.09
SLC6A6-207ENST00000618278 FTSJ3Q8IY81 847 aaKnown RBP14.46□□□□□ -0.09
SLC6A6-207ENST00000618278 PNNQ9H307 717 aaKnown RBP14.44□□□□□ -0.1
SLC6A6-207ENST00000618278 MAPK8IP3Q9UPT6 1336 aa14.44□□□□□ -0.1
SLC6A6-207ENST00000618278 GLIPR1L2Q4G1C9 344 aa14.43□□□□□ -0.1
SLC6A6-207ENST00000618278 GOLGA6L6A8MZA4 724 aa14.42□□□□□ -0.1
SLC6A6-207ENST00000618278 KIAA2012Q0VF49 1180 aa14.42□□□□□ -0.1
SLC6A6-207ENST00000618278 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
SLC6A6-207ENST00000618278 GOLGA6L22H0YM25 854 aa14.42□□□□□ -0.1
SLC6A6-207ENST00000618278 U2SURPO15042 1029 aaKnown RBP14.4□□□□□ -0.1
SLC6A6-207ENST00000618278 CHMP3Q9Y3E7 222 aa14.4□□□□□ -0.1
SLC6A6-207ENST00000618278 GTF2E1P29083 439 aaPredicted RBP14.4□□□□□ -0.1
SLC6A6-207ENST00000618278 RAD21O60216 631 aa14.39□□□□□ -0.11
SLC6A6-207ENST00000618278 SAFB2Q14151 953 aaKnown RBP eCLIP14.39□□□□□ -0.11
SLC6A6-207ENST00000618278 ANP32EQ9BTT0 268 aa14.39□□□□□ -0.11
SLC6A6-207ENST00000618278 IRX6P78412 446 aaPredicted RBP14.38□□□□□ -0.11
SLC6A6-207ENST00000618278 FRAT2O75474 233 aaPredicted RBP14.37□□□□□ -0.11
SLC6A6-207ENST00000618278 CTDP1Q9Y5B0 961 aaPredicted RBP14.37□□□□□ -0.11
SLC6A6-207ENST00000618278 DDX10Q13206 875 aaKnown RBP14.37□□□□□ -0.11
SLC6A6-207ENST00000618278 FBXW7Q969H0 707 aa14.37□□□□□ -0.11
SLC6A6-207ENST00000618278 PPP1R1BQ9UD71 204 aaPredicted RBP14.36□□□□□ -0.11
SLC6A6-207ENST00000618278 TAF7LQ5H9L4 462 aa14.36□□□□□ -0.11
SLC6A6-207ENST00000618278 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
SLC6A6-207ENST00000618278 MRS2Q9HD23 443 aa14.33□□□□□ -0.12
SLC6A6-207ENST00000618278 A0A0U1RQG5 324 aaPredicted RBP14.32□□□□□ -0.12
SLC6A6-207ENST00000618278 BECN1Q14457 450 aa14.32□□□□□ -0.12
SLC6A6-207ENST00000618278 GORABQ5T7V8 394 aa14.32□□□□□ -0.12
SLC6A6-207ENST00000618278 CREBRFQ8IUR6 639 aa14.32□□□□□ -0.12
SLC6A6-207ENST00000618278 MARCH6O60337 910 aa14.32□□□□□ -0.12
SLC6A6-207ENST00000618278 SAMD1Q6SPF0 538 aaPredicted RBP14.31□□□□□ -0.12
SLC6A6-207ENST00000618278 CHAF1AQ13111 956 aaPredicted RBP14.31□□□□□ -0.12
SLC6A6-207ENST00000618278 HIRIP3Q9BW71 556 aaPredicted RBP14.31□□□□□ -0.12
SLC6A6-207ENST00000618278 TCEAL9Q9UHQ7 104 aa14.31□□□□□ -0.12
SLC6A6-207ENST00000618278 RRP7BPQ9NSQ0 103 aa14.31□□□□□ -0.12
SLC6A6-207ENST00000618278 FRAT1Q92837 279 aaPredicted RBP14.3□□□□□ -0.12
SLC6A6-207ENST00000618278 HDGFP51858 240 aaKnown RBP14.3□□□□□ -0.12
SLC6A6-207ENST00000618278 RTF1Q92541 710 aaKnown RBP14.3□□□□□ -0.12
SLC6A6-207ENST00000618278 NUDCQ9Y266 331 aa14.3□□□□□ -0.12
SLC6A6-207ENST00000618278 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
SLC6A6-207ENST00000618278 PLEKHD1A6NEE1 506 aa14.29□□□□□ -0.12
SLC6A6-207ENST00000618278 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
SLC6A6-207ENST00000618278 STK26Q9P289 416 aa14.29□□□□□ -0.12
SLC6A6-207ENST00000618278 APBB1O00213 710 aa14.29□□□□□ -0.12
SLC6A6-207ENST00000618278 DRC7Q8IY82 874 aa14.28□□□□□ -0.12
SLC6A6-207ENST00000618278 SRPK2P78362 688 aaKnown RBP14.28□□□□□ -0.12
SLC6A6-207ENST00000618278 KNSTRNQ9Y448 316 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms