RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
CCDC144B-208ENST00000618081 CASC1Q6TDU7 716 aa14.72□□□□□ -0.05
CCDC144B-208ENST00000618081 CHIC2Q9UKJ5 165 aa14.72□□□□□ -0.05
CCDC144B-208ENST00000618081 ANP32EQ9BTT0 268 aa14.71□□□□□ -0.05
CCDC144B-208ENST00000618081 GOLGA6L22H0YM25 854 aa14.71□□□□□ -0.06
CCDC144B-208ENST00000618081 NBR1Q14596 966 aa14.7□□□□□ -0.06
CCDC144B-208ENST00000618081 MRS2Q9HD23 443 aa14.69□□□□□ -0.06
CCDC144B-208ENST00000618081 TRIM44Q96DX7 344 aaPredicted RBP14.68□□□□□ -0.06
CCDC144B-208ENST00000618081 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
CCDC144B-208ENST00000618081 PLEKHG5O94827 1062 aa14.66□□□□□ -0.06
CCDC144B-208ENST00000618081 CFAP53Q96M91 514 aa14.64□□□□□ -0.07
CCDC144B-208ENST00000618081 ARID4BQ4LE39 1312 aaPredicted RBP14.64□□□□□ -0.07
CCDC144B-208ENST00000618081 RSF1Q96T23 1441 aaPredicted RBP14.63□□□□□ -0.07
CCDC144B-208ENST00000618081 NPHP1O15259 732 aa14.63□□□□□ -0.07
CCDC144B-208ENST00000618081 CDCA8Q53HL2 280 aa14.63□□□□□ -0.07
CCDC144B-208ENST00000618081 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
CCDC144B-208ENST00000618081 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
CCDC144B-208ENST00000618081 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
CCDC144B-208ENST00000618081 FTSJ3Q8IY81 847 aaKnown RBP14.6□□□□□ -0.07
CCDC144B-208ENST00000618081 TNNT2P45379 298 aaPredicted RBP14.58□□□□□ -0.08
CCDC144B-208ENST00000618081 TULP1O00294 542 aaPredicted RBP14.57□□□□□ -0.08
CCDC144B-208ENST00000618081 KNSTRNQ9Y448 316 aa14.56□□□□□ -0.08
CCDC144B-208ENST00000618081 PTMAP06454 111 aaKnown RBP14.55□□□□□ -0.08
CCDC144B-208ENST00000618081 KCNH8Q96L42 1107 aa14.54□□□□□ -0.08
CCDC144B-208ENST00000618081 SENP3Q9H4L4 574 aaPredicted RBP14.54□□□□□ -0.08
CCDC144B-208ENST00000618081 GOLGA6L6A8MZA4 724 aa14.53□□□□□ -0.08
CCDC144B-208ENST00000618081 PPM1GO15355 546 aaPredicted RBP14.53□□□□□ -0.08
CCDC144B-208ENST00000618081 PLEKHD1A6NEE1 506 aa14.53□□□□□ -0.08
CCDC144B-208ENST00000618081 GOLGA2Q08379 1002 aa14.52□□□□□ -0.08
CCDC144B-208ENST00000618081 CHMP4BQ9H444 224 aaKnown RBP14.52□□□□□ -0.08
CCDC144B-208ENST00000618081 DNTTIP2Q5QJE6 756 aaKnown RBP14.51□□□□□ -0.09
CCDC144B-208ENST00000618081 CLIP1P30622 1438 aa14.5□□□□□ -0.09
CCDC144B-208ENST00000618081 MAPK8IP3Q9UPT6 1336 aa14.5□□□□□ -0.09
CCDC144B-208ENST00000618081 PNNQ9H307 717 aaKnown RBP14.49□□□□□ -0.09
CCDC144B-208ENST00000618081 RRP7BPQ9NSQ0 103 aa14.48□□□□□ -0.09
CCDC144B-208ENST00000618081 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
CCDC144B-208ENST00000618081 NUDCQ9Y266 331 aa14.47□□□□□ -0.09
CCDC144B-208ENST00000618081 FGD1P98174 961 aa14.47□□□□□ -0.09
CCDC144B-208ENST00000618081 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
CCDC144B-208ENST00000618081 LAS1LQ9Y4W2 734 aaKnown RBP14.46□□□□□ -0.09
CCDC144B-208ENST00000618081 OS9Q13438 667 aaPredicted RBP14.46□□□□□ -0.09
CCDC144B-208ENST00000618081 NRDCO43847 1150 aa14.46□□□□□ -0.1
CCDC144B-208ENST00000618081 LMOD2Q6P5Q4 547 aa14.45□□□□□ -0.1
CCDC144B-208ENST00000618081 RGL3Q3MIN7 710 aa14.45□□□□□ -0.1
CCDC144B-208ENST00000618081 POGKQ9P215 609 aa14.45□□□□□ -0.1
CCDC144B-208ENST00000618081 IRX6P78412 446 aaPredicted RBP14.44□□□□□ -0.1
CCDC144B-208ENST00000618081 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
CCDC144B-208ENST00000618081 MS4A1P11836 297 aa14.43□□□□□ -0.1
CCDC144B-208ENST00000618081 KCNJ4P48050 445 aa14.42□□□□□ -0.1
CCDC144B-208ENST00000618081 TPRNQ4KMQ1 711 aa14.41□□□□□ -0.1
CCDC144B-208ENST00000618081 CFDP1Q9UEE9 299 aaPredicted RBP14.4□□□□□ -0.1
CCDC144B-208ENST00000618081 EEA1Q15075 1411 aa14.4□□□□□ -0.1
CCDC144B-208ENST00000618081 KANK1Q14678 1352 aa14.39□□□□□ -0.11
CCDC144B-208ENST00000618081 CARD11Q9BXL7 1154 aa14.38□□□□□ -0.11
CCDC144B-208ENST00000618081 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
CCDC144B-208ENST00000618081 NAP1L2Q9ULW6 460 aaPredicted RBP14.38□□□□□ -0.11
CCDC144B-208ENST00000618081 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
CCDC144B-208ENST00000618081 HSP90AB1P08238 724 aaKnown RBP14.37□□□□□ -0.11
CCDC144B-208ENST00000618081 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
CCDC144B-208ENST00000618081 TAOK2Q9UL54 1235 aa14.37□□□□□ -0.11
CCDC144B-208ENST00000618081 CLSTN1O94985 981 aa14.36□□□□□ -0.11
CCDC144B-208ENST00000618081 L1TD1Q5T7N2 865 aaKnown RBP14.35□□□□□ -0.11
CCDC144B-208ENST00000618081 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
CCDC144B-208ENST00000618081 PLCB2Q00722 1185 aa14.33□□□□□ -0.11
CCDC144B-208ENST00000618081 CHAF1AQ13111 956 aaPredicted RBP14.33□□□□□ -0.11
CCDC144B-208ENST00000618081 MCCP23508 829 aa14.33□□□□□ -0.12
CCDC144B-208ENST00000618081 ERICH6BQ5W0A0 696 aa14.33□□□□□ -0.12
CCDC144B-208ENST00000618081 KIF27Q86VH2 1401 aa14.33□□□□□ -0.12
CCDC144B-208ENST00000618081 NEUROD2Q15784 382 aa14.33□□□□□ -0.12
CCDC144B-208ENST00000618081 CFAP44Q96MT7 982 aa14.33□□□□□ -0.12
CCDC144B-208ENST00000618081 NACADO15069 1562 aa14.32□□□□□ -0.12
CCDC144B-208ENST00000618081 FRAT1Q92837 279 aaPredicted RBP14.3□□□□□ -0.12
CCDC144B-208ENST00000618081 U2SURPO15042 1029 aaKnown RBP14.3□□□□□ -0.12
CCDC144B-208ENST00000618081 MIER1Q8N108 512 aa14.29□□□□□ -0.12
CCDC144B-208ENST00000618081 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
CCDC144B-208ENST00000618081 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
CCDC144B-208ENST00000618081 KIAA2012Q0VF49 1180 aa14.28□□□□□ -0.12
CCDC144B-208ENST00000618081 GNL2Q13823 731 aaKnown RBP14.28□□□□□ -0.12
CCDC144B-208ENST00000618081 CEP162Q5TB80 1403 aa14.27□□□□□ -0.12
CCDC144B-208ENST00000618081 ISY1Q9ULR0 285 aaKnown RBP14.27□□□□□ -0.12
CCDC144B-208ENST00000618081 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.13
CCDC144B-208ENST00000618081 TMX4Q9H1E5 349 aaPredicted RBP14.27□□□□□ -0.13
CCDC144B-208ENST00000618081 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
CCDC144B-208ENST00000618081 RTF1Q92541 710 aaKnown RBP14.26□□□□□ -0.13
CCDC144B-208ENST00000618081 NAP1L5Q96NT1 182 aaPredicted RBP14.25□□□□□ -0.13
CCDC144B-208ENST00000618081 FHAD1B1AJZ9 1412 aa14.25□□□□□ -0.13
CCDC144B-208ENST00000618081 TMF1P82094 1093 aa14.24□□□□□ -0.13
CCDC144B-208ENST00000618081 RGS3P49796 1198 aa14.24□□□□□ -0.13
CCDC144B-208ENST00000618081 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
CCDC144B-208ENST00000618081 CC2D1BQ5T0F9 858 aaKnown RBP14.23□□□□□ -0.13
CCDC144B-208ENST00000618081 DRC7Q8IY82 874 aa14.23□□□□□ -0.13
CCDC144B-208ENST00000618081 SUPT16HQ9Y5B9 1047 aaKnown RBP14.23□□□□□ -0.13
CCDC144B-208ENST00000618081 CCNB3Q8WWL7 1395 aa14.23□□□□□ -0.13
CCDC144B-208ENST00000618081 SRPK2P78362 688 aaKnown RBP14.22□□□□□ -0.13
CCDC144B-208ENST00000618081 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
CCDC144B-208ENST00000618081 KIAA1211Q6ZU35 1233 aa14.21□□□□□ -0.13
CCDC144B-208ENST00000618081 MSNP26038 577 aaKnown RBP14.19□□□□□ -0.14
CCDC144B-208ENST00000618081 CALD1Q05682 793 aaKnown RBP14.18□□□□□ -0.14
CCDC144B-208ENST00000618081 PPP4R2Q9NY27 417 aa14.18□□□□□ -0.14
CCDC144B-208ENST00000618081 CHMP4AQ9BY43 222 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms