RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 ATMINO43313 823 aaPredicted RBP12.46□□□□□ -0.41
MALAT1-210ENST00000617489 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
MALAT1-210ENST00000617489 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
MALAT1-210ENST00000617489 KIF12Q96FN5 646 aa12.45□□□□□ -0.42
MALAT1-210ENST00000617489 FKBP8Q14318 412 aa12.44□□□□□ -0.42
MALAT1-210ENST00000617489 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
MALAT1-210ENST00000617489 OTUD5Q96G74 571 aa12.44□□□□□ -0.42
MALAT1-210ENST00000617489 METRNQ9UJH8 293 aa12.44□□□□□ -0.42
MALAT1-210ENST00000617489 C7P10643 843 aa12.43□□□□□ -0.42
MALAT1-210ENST00000617489 RASEFQ8IZ41 740 aa12.43□□□□□ -0.42
MALAT1-210ENST00000617489 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
MALAT1-210ENST00000617489 MAP3K13O43283 966 aa12.39□□□□□ -0.43
MALAT1-210ENST00000617489 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
MALAT1-210ENST00000617489 BMP2KQ9NSY1 1161 aaPredicted RBP12.33□□□□□ -0.44
MALAT1-210ENST00000617489 TRPC6Q9Y210 931 aa12.32□□□□□ -0.44
MALAT1-210ENST00000617489 TIE1P35590 1138 aa12.3□□□□□ -0.44
MALAT1-210ENST00000617489 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
MALAT1-210ENST00000617489 PCDHB13Q9Y5F0 798 aa12.29□□□□□ -0.44
MALAT1-210ENST00000617489 NUBP1P53384 320 aa12.28□□□□□ -0.44
MALAT1-210ENST00000617489 FAM212AQ96EL1 285 aa12.27□□□□□ -0.45
MALAT1-210ENST00000617489 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
MALAT1-210ENST00000617489 PLSCR2Q9NRY7 297 aa12.25□□□□□ -0.45
MALAT1-210ENST00000617489 SEC24BO95487 1268 aa12.24□□□□□ -0.45
MALAT1-210ENST00000617489 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
MALAT1-210ENST00000617489 SCUBE2Q9NQ36 999 aa12.24□□□□□ -0.45
MALAT1-210ENST00000617489 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
MALAT1-210ENST00000617489 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
MALAT1-210ENST00000617489 DCAF8Q5TAQ9 597 aa12.2□□□□□ -0.46
MALAT1-210ENST00000617489 POTEMA6NI47 508 aa12.18□□□□□ -0.46
MALAT1-210ENST00000617489 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
MALAT1-210ENST00000617489 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
MALAT1-210ENST00000617489 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
MALAT1-210ENST00000617489 POTEGQ6S5H5 508 aa12.16□□□□□ -0.46
MALAT1-210ENST00000617489 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
MALAT1-210ENST00000617489 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
MALAT1-210ENST00000617489 KLHL34Q8N239 644 aa12.13□□□□□ -0.47
MALAT1-210ENST00000617489 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
MALAT1-210ENST00000617489 IER5LQ5T953 404 aa12.12□□□□□ -0.47
MALAT1-210ENST00000617489 PYGBP11216 843 aa12.11□□□□□ -0.47
MALAT1-210ENST00000617489 PLCG2P16885 1265 aa12.04□□□□□ -0.48
MALAT1-210ENST00000617489 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
MALAT1-210ENST00000617489 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
MALAT1-210ENST00000617489 GSE1Q14687 1217 aa12□□□□□ -0.49
MALAT1-210ENST00000617489 PCDH10Q9P2E7 1040 aa11.99□□□□□ -0.49
MALAT1-210ENST00000617489 SLAIN1Q8ND83 568 aa11.97□□□□□ -0.49
MALAT1-210ENST00000617489 LCE2DQ5TA82 110 aaPredicted RBP11.95□□□□□ -0.5
MALAT1-210ENST00000617489 IRX5P78411 483 aaPredicted RBP11.94□□□□□ -0.5
MALAT1-210ENST00000617489 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
MALAT1-210ENST00000617489 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
MALAT1-210ENST00000617489 ZNF467Q7Z7K2 595 aaPredicted RBP11.92□□□□□ -0.5
MALAT1-210ENST00000617489 MKRN3Q13064 507 aaKnown RBP11.86□□□□□ -0.51
MALAT1-210ENST00000617489 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
MALAT1-210ENST00000617489 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
MALAT1-210ENST00000617489 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.84□□□□□ -0.51
MALAT1-210ENST00000617489 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
MALAT1-210ENST00000617489 PSEN1P49768 467 aa11.82□□□□□ -0.52
MALAT1-210ENST00000617489 ST18O60284 1047 aa11.81□□□□□ -0.52
MALAT1-210ENST00000617489 IFNLR1Q8IU57 520 aaPredicted RBP11.8□□□□□ -0.52
MALAT1-210ENST00000617489 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
MALAT1-210ENST00000617489 SNPHO15079 494 aa11.77□□□□□ -0.53
MALAT1-210ENST00000617489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.77□□□□□ -0.53
MALAT1-210ENST00000617489 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
MALAT1-210ENST00000617489 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
MALAT1-210ENST00000617489 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
MALAT1-210ENST00000617489 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
MALAT1-210ENST00000617489 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
MALAT1-210ENST00000617489 G3V3G9 751 aa11.67□□□□□ -0.54
MALAT1-210ENST00000617489 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
MALAT1-210ENST00000617489 MARVELD3Q96A59 401 aa11.64□□□□□ -0.55
MALAT1-210ENST00000617489 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
MALAT1-210ENST00000617489 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
MALAT1-210ENST00000617489 BOLA1Q9Y3E2 137 aa11.57□□□□□ -0.56
MALAT1-210ENST00000617489 EMP3P54852 163 aa11.56□□□□□ -0.56
MALAT1-210ENST00000617489 ILDR1Q86SU0 546 aaPredicted RBP11.56□□□□□ -0.56
MALAT1-210ENST00000617489 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
MALAT1-210ENST00000617489 FAM205CA6NFA0 338 aa11.48□□□□□ -0.57
MALAT1-210ENST00000617489 SPNS2Q8IVW8 549 aa11.47□□□□□ -0.57
MALAT1-210ENST00000617489 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
MALAT1-210ENST00000617489 ZNF710Q8N1W2 664 aa11.46□□□□□ -0.57
MALAT1-210ENST00000617489 MMRN1Q13201 1228 aa11.44□□□□□ -0.58
MALAT1-210ENST00000617489 HS3ST6Q96QI5 342 aa11.44□□□□□ -0.58
MALAT1-210ENST00000617489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
MALAT1-210ENST00000617489 VGFO15240 615 aaPredicted RBP11.41□□□□□ -0.58
MALAT1-210ENST00000617489 DOK7Q18PE1 504 aa11.41□□□□□ -0.58
MALAT1-210ENST00000617489 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
MALAT1-210ENST00000617489 SOX12O15370 315 aa11.4□□□□□ -0.58
MALAT1-210ENST00000617489 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
MALAT1-210ENST00000617489 POTEB3A0JP26 581 aa11.38□□□□□ -0.59
MALAT1-210ENST00000617489 POTEBQ6S5H4 581 aa11.38□□□□□ -0.59
MALAT1-210ENST00000617489 RNF25Q96BH1 459 aaPredicted RBP11.38□□□□□ -0.59
MALAT1-210ENST00000617489 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
MALAT1-210ENST00000617489 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
MALAT1-210ENST00000617489 ERBB3P21860 1342 aa11.35□□□□□ -0.59
MALAT1-210ENST00000617489 HOXB1P14653 301 aaPredicted RBP11.35□□□□□ -0.59
MALAT1-210ENST00000617489 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
MALAT1-210ENST00000617489 TAOK2Q9UL54 1235 aa11.34□□□□□ -0.59
MALAT1-210ENST00000617489 KRTAP3-3Q9BYR6 98 aa11.32□□□□□ -0.6
MALAT1-210ENST00000617489 KRTAP3-2Q9BYR7 98 aa11.32□□□□□ -0.6
MALAT1-210ENST00000617489 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
MALAT1-210ENST00000617489 TMEM92Q6UXU6 159 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms