RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-231ENST00000617271 CASC1Q6TDU7 716 aa9.72□□□□□ -0.85
PCDH15-231ENST00000617271 GLIPR1L2Q4G1C9 344 aa9.71□□□□□ -0.86
PCDH15-231ENST00000617271 CCDC136Q96JN2 1154 aa9.71□□□□□ -0.86
PCDH15-231ENST00000617271 KDM2AQ9Y2K7 1162 aa9.7□□□□□ -0.86
PCDH15-231ENST00000617271 EEA1Q15075 1411 aa9.7□□□□□ -0.86
PCDH15-231ENST00000617271 FKBP8Q14318 412 aa9.7□□□□□ -0.86
PCDH15-231ENST00000617271 BECN1Q14457 450 aa9.69□□□□□ -0.86
PCDH15-231ENST00000617271 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
PCDH15-231ENST00000617271 ANP32EQ9BTT0 268 aa9.69□□□□□ -0.86
PCDH15-231ENST00000617271 DCAF1Q9Y4B6 1507 aa9.69□□□□□ -0.86
PCDH15-231ENST00000617271 ERCC6Q03468 1493 aa9.68□□□□□ -0.86
PCDH15-231ENST00000617271 MRS2Q9HD23 443 aa9.68□□□□□ -0.86
PCDH15-231ENST00000617271 GOLGA6L22H0YM25 854 aa9.67□□□□□ -0.86
PCDH15-231ENST00000617271 ZRSR1Q15695 479 aaKnown RBP9.67□□□□□ -0.86
PCDH15-231ENST00000617271 CHMP4BQ9H444 224 aaKnown RBP9.67□□□□□ -0.86
PCDH15-231ENST00000617271 EIF4G2P78344 907 aaKnown RBP eCLIP9.67□□□□□ -0.86
PCDH15-231ENST00000617271 GOLGA3Q08378 1498 aa9.66□□□□□ -0.86
PCDH15-231ENST00000617271 CLIP1P30622 1438 aa9.66□□□□□ -0.86
PCDH15-231ENST00000617271 KCNH8Q96L42 1107 aa9.66□□□□□ -0.86
PCDH15-231ENST00000617271 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
PCDH15-231ENST00000617271 HDGFP51858 240 aaKnown RBP9.65□□□□□ -0.86
PCDH15-231ENST00000617271 SALL2Q9Y467 1007 aaPredicted RBP9.65□□□□□ -0.86
PCDH15-231ENST00000617271 PNNQ9H307 717 aaKnown RBP9.65□□□□□ -0.86
PCDH15-231ENST00000617271 NPHP1O15259 732 aa9.64□□□□□ -0.87
PCDH15-231ENST00000617271 KANK1Q14678 1352 aa9.63□□□□□ -0.87
PCDH15-231ENST00000617271 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
PCDH15-231ENST00000617271 BAZ1BQ9UIG0 1483 aaKnown RBP9.63□□□□□ -0.87
PCDH15-231ENST00000617271 MAPK8IP3Q9UPT6 1336 aa9.63□□□□□ -0.87
PCDH15-231ENST00000617271 NACADO15069 1562 aa9.62□□□□□ -0.87
PCDH15-231ENST00000617271 KNSTRNQ9Y448 316 aa9.62□□□□□ -0.87
PCDH15-231ENST00000617271 ARXQ96QS3 562 aa9.6□□□□□ -0.87
PCDH15-231ENST00000617271 MS4A1P11836 297 aa9.6□□□□□ -0.87
PCDH15-231ENST00000617271 KIF27Q86VH2 1401 aa9.6□□□□□ -0.87
PCDH15-231ENST00000617271 POGKQ9P215 609 aa9.6□□□□□ -0.87
PCDH15-231ENST00000617271 CFDP1Q9UEE9 299 aaPredicted RBP9.59□□□□□ -0.87
PCDH15-231ENST00000617271 GOLGA6L6A8MZA4 724 aa9.59□□□□□ -0.87
PCDH15-231ENST00000617271 FTSJ3Q8IY81 847 aaKnown RBP9.59□□□□□ -0.87
PCDH15-231ENST00000617271 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
PCDH15-231ENST00000617271 RRP7BPQ9NSQ0 103 aa9.58□□□□□ -0.88
PCDH15-231ENST00000617271 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
PCDH15-231ENST00000617271 TRIM44Q96DX7 344 aaPredicted RBP9.56□□□□□ -0.88
PCDH15-231ENST00000617271 CEP164Q9UPV0 1460 aa9.55□□□□□ -0.88
PCDH15-231ENST00000617271 OS9Q13438 667 aaPredicted RBP9.54□□□□□ -0.88
PCDH15-231ENST00000617271 LMOD2Q6P5Q4 547 aa9.54□□□□□ -0.88
PCDH15-231ENST00000617271 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
PCDH15-231ENST00000617271 CARD11Q9BXL7 1154 aa9.54□□□□□ -0.88
PCDH15-231ENST00000617271 WRNQ14191 1432 aaPredicted RBP eCLIP9.53□□□□□ -0.88
PCDH15-231ENST00000617271 CCNB3Q8WWL7 1395 aa9.53□□□□□ -0.88
PCDH15-231ENST00000617271 PPM1GO15355 546 aaPredicted RBP9.53□□□□□ -0.88
PCDH15-231ENST00000617271 PTMAP06454 111 aaKnown RBP9.52□□□□□ -0.89
PCDH15-231ENST00000617271 RGL3Q3MIN7 710 aa9.52□□□□□ -0.89
PCDH15-231ENST00000617271 FHAD1B1AJZ9 1412 aa9.51□□□□□ -0.89
PCDH15-231ENST00000617271 NRDCO43847 1150 aa9.51□□□□□ -0.89
PCDH15-231ENST00000617271 LAS1LQ9Y4W2 734 aaKnown RBP9.5□□□□□ -0.89
PCDH15-231ENST00000617271 EIF4G1Q04637 1599 aaKnown RBP9.5□□□□□ -0.89
PCDH15-231ENST00000617271 TRHP20396 242 aaPredicted RBP9.49□□□□□ -0.89
PCDH15-231ENST00000617271 CEP162Q5TB80 1403 aa9.49□□□□□ -0.89
PCDH15-231ENST00000617271 FGD1P98174 961 aa9.49□□□□□ -0.89
PCDH15-231ENST00000617271 SENP3Q9H4L4 574 aaPredicted RBP9.49□□□□□ -0.89
PCDH15-231ENST00000617271 TULP1O00294 542 aaPredicted RBP9.48□□□□□ -0.89
PCDH15-231ENST00000617271 MCCP23508 829 aa9.48□□□□□ -0.89
PCDH15-231ENST00000617271 NBR1Q14596 966 aa9.48□□□□□ -0.89
PCDH15-231ENST00000617271 L1TD1Q5T7N2 865 aaKnown RBP9.48□□□□□ -0.89
PCDH15-231ENST00000617271 TMX4Q9H1E5 349 aaPredicted RBP9.48□□□□□ -0.89
PCDH15-231ENST00000617271 TNNT2P45379 298 aaPredicted RBP9.48□□□□□ -0.89
PCDH15-231ENST00000617271 TMF1P82094 1093 aa9.48□□□□□ -0.89
PCDH15-231ENST00000617271 CHMP4AQ9BY43 222 aa9.47□□□□□ -0.89
PCDH15-231ENST00000617271 KCNJ4P48050 445 aa9.47□□□□□ -0.89
PCDH15-231ENST00000617271 CARMIL2Q6F5E8 1435 aa9.46□□□□□ -0.89
PCDH15-231ENST00000617271 BAZ1AQ9NRL2 1556 aaPredicted RBP9.45□□□□□ -0.9
PCDH15-231ENST00000617271 TNIKQ9UKE5 1360 aa9.45□□□□□ -0.9
PCDH15-231ENST00000617271 HDGFL2Q7Z4V5 671 aaPredicted RBP9.44□□□□□ -0.9
PCDH15-231ENST00000617271 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
PCDH15-231ENST00000617271 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
PCDH15-231ENST00000617271 HSP90AB1P08238 724 aaKnown RBP9.43□□□□□ -0.9
PCDH15-231ENST00000617271 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
PCDH15-231ENST00000617271 DNTTIP2Q5QJE6 756 aaKnown RBP9.43□□□□□ -0.9
PCDH15-231ENST00000617271 CLSTN1O94985 981 aa9.42□□□□□ -0.9
PCDH15-231ENST00000617271 NAP1L2Q9ULW6 460 aaPredicted RBP9.42□□□□□ -0.9
PCDH15-231ENST00000617271 EIF3AQ14152 1382 aaKnown RBP9.42□□□□□ -0.9
PCDH15-231ENST00000617271 SRPK2P78362 688 aaKnown RBP9.41□□□□□ -0.9
PCDH15-231ENST00000617271 GOLGA6L4A6NEF3 574 aa9.41□□□□□ -0.9
PCDH15-231ENST00000617271 NEUROD2Q15784 382 aa9.4□□□□□ -0.9
PCDH15-231ENST00000617271 MORC1Q86VD1 984 aa9.4□□□□□ -0.91
PCDH15-231ENST00000617271 PTMSP20962 102 aa9.39□□□□□ -0.91
PCDH15-231ENST00000617271 IRX6P78412 446 aaPredicted RBP9.39□□□□□ -0.91
PCDH15-231ENST00000617271 KIAA2012Q0VF49 1180 aa9.39□□□□□ -0.91
PCDH15-231ENST00000617271 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
PCDH15-231ENST00000617271 HDAC5Q9UQL6 1122 aa9.39□□□□□ -0.91
PCDH15-231ENST00000617271 HSCBQ8IWL3 235 aa9.39□□□□□ -0.91
PCDH15-231ENST00000617271 ARHGAP35Q9NRY4 1499 aa9.39□□□□□ -0.91
PCDH15-231ENST00000617271 GNL2Q13823 731 aaKnown RBP9.39□□□□□ -0.91
PCDH15-231ENST00000617271 ISY1Q9ULR0 285 aaKnown RBP9.38□□□□□ -0.91
PCDH15-231ENST00000617271 PDS5BQ9NTI5 1447 aa9.38□□□□□ -0.91
PCDH15-231ENST00000617271 CHAF1AQ13111 956 aaPredicted RBP9.38□□□□□ -0.91
PCDH15-231ENST00000617271 CSB-PGBD3P0DP91 1061 aa9.38□□□□□ -0.91
PCDH15-231ENST00000617271 MLECQ14165 292 aa9.38□□□□□ -0.91
PCDH15-231ENST00000617271 IPO8O15397 1037 aaKnown RBP9.37□□□□□ -0.91
PCDH15-231ENST00000617271 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
PCDH15-231ENST00000617271 CC2D1BQ5T0F9 858 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms