RNA–Protein interactions for RNA: ENST00000617133.4

SEM1-217, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-217ENST00000617133 RNF25Q96BH1 459 aaPredicted RBP12.02□□□□□ -0.49
SEM1-217ENST00000617133 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
SEM1-217ENST00000617133 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
SEM1-217ENST00000617133 PYGBP11216 843 aa11.98□□□□□ -0.49
SEM1-217ENST00000617133 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
SEM1-217ENST00000617133 RIOK3O14730 519 aaKnown RBP11.94□□□□□ -0.5
SEM1-217ENST00000617133 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
SEM1-217ENST00000617133 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
SEM1-217ENST00000617133 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
SEM1-217ENST00000617133 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
SEM1-217ENST00000617133 BBXQ8WY36 941 aaPredicted RBP11.88□□□□□ -0.51
SEM1-217ENST00000617133 VGFO15240 615 aaPredicted RBP11.86□□□□□ -0.51
SEM1-217ENST00000617133 HS6ST3Q8IZP7 471 aa11.86□□□□□ -0.51
SEM1-217ENST00000617133 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
SEM1-217ENST00000617133 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
SEM1-217ENST00000617133 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.83□□□□□ -0.52
SEM1-217ENST00000617133 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
SEM1-217ENST00000617133 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
SEM1-217ENST00000617133 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.79□□□□□ -0.52
SEM1-217ENST00000617133 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
SEM1-217ENST00000617133 STK25O00506 426 aa11.79□□□□□ -0.52
SEM1-217ENST00000617133 ZFP91Q96JP5 570 aaPredicted RBP11.79□□□□□ -0.52
SEM1-217ENST00000617133 SGIP1Q9BQI5 828 aa11.79□□□□□ -0.52
SEM1-217ENST00000617133 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
SEM1-217ENST00000617133 PCDHB8Q9UN66 801 aa11.78□□□□□ -0.52
SEM1-217ENST00000617133 PCDHB13Q9Y5F0 798 aa11.78□□□□□ -0.52
SEM1-217ENST00000617133 MAP3K13O43283 966 aa11.76□□□□□ -0.53
SEM1-217ENST00000617133 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
SEM1-217ENST00000617133 PHF12Q96QT6 1004 aa11.76□□□□□ -0.53
SEM1-217ENST00000617133 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
SEM1-217ENST00000617133 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
SEM1-217ENST00000617133 BCL11BQ9C0K0 894 aaPredicted RBP11.75□□□□□ -0.53
SEM1-217ENST00000617133 IFNL1Q8IU54 200 aa11.73□□□□□ -0.53
SEM1-217ENST00000617133 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
SEM1-217ENST00000617133 STK24Q9Y6E0 443 aa11.73□□□□□ -0.53
SEM1-217ENST00000617133 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
SEM1-217ENST00000617133 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.53
SEM1-217ENST00000617133 NKX1-1Q15270 411 aaPredicted RBP11.7□□□□□ -0.54
SEM1-217ENST00000617133 SPRYD3Q8NCJ5 442 aa11.7□□□□□ -0.54
SEM1-217ENST00000617133 PSEN1P49768 467 aa11.68□□□□□ -0.54
SEM1-217ENST00000617133 HAX1O00165 279 aa11.66□□□□□ -0.54
SEM1-217ENST00000617133 EVX2Q03828 476 aa11.62□□□□□ -0.55
SEM1-217ENST00000617133 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
SEM1-217ENST00000617133 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
SEM1-217ENST00000617133 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
SEM1-217ENST00000617133 POTEHQ6S545 545 aa11.55□□□□□ -0.56
SEM1-217ENST00000617133 TSHZ2Q9NRE2 1034 aa11.55□□□□□ -0.56
SEM1-217ENST00000617133 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
SEM1-217ENST00000617133 GALR2O43603 387 aaPredicted RBP11.52□□□□□ -0.57
SEM1-217ENST00000617133 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
SEM1-217ENST00000617133 RYDENQ9NUL5 291 aaKnown RBP11.52□□□□□ -0.57
SEM1-217ENST00000617133 VSIG10Q8N0Z9 540 aa11.51□□□□□ -0.57
SEM1-217ENST00000617133 EFCAB3Q8N7B9 438 aa11.51□□□□□ -0.57
SEM1-217ENST00000617133 MFRPQ9BY79 579 aa11.5□□□□□ -0.57
SEM1-217ENST00000617133 TIE1P35590 1138 aa11.48□□□□□ -0.57
SEM1-217ENST00000617133 CLCN6P51797 869 aa11.48□□□□□ -0.57
SEM1-217ENST00000617133 KDM2AQ9Y2K7 1162 aa11.47□□□□□ -0.57
SEM1-217ENST00000617133 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
SEM1-217ENST00000617133 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
SEM1-217ENST00000617133 SOX12O15370 315 aa11.45□□□□□ -0.58
SEM1-217ENST00000617133 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
SEM1-217ENST00000617133 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
SEM1-217ENST00000617133 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
SEM1-217ENST00000617133 NLRP6P59044 892 aa11.42□□□□□ -0.58
SEM1-217ENST00000617133 GABBR2O75899 941 aa11.39□□□□□ -0.59
SEM1-217ENST00000617133 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
SEM1-217ENST00000617133 TRIM35Q9UPQ4 493 aa11.37□□□□□ -0.59
SEM1-217ENST00000617133 PPP1R37O75864 691 aa11.36□□□□□ -0.59
SEM1-217ENST00000617133 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
SEM1-217ENST00000617133 ATN1P54259 1190 aaPredicted RBP11.35□□□□□ -0.59
SEM1-217ENST00000617133 ATMINO43313 823 aaPredicted RBP11.34□□□□□ -0.59
SEM1-217ENST00000617133 ASTLQ6HA08 431 aaPredicted RBP11.33□□□□□ -0.6
SEM1-217ENST00000617133 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
SEM1-217ENST00000617133 CADPS2Q86UW7 1296 aa11.3□□□□□ -0.6
SEM1-217ENST00000617133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.65e-8■□□□□ 10.5
SEM1-217ENST00000617133 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
SEM1-217ENST00000617133 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
SEM1-217ENST00000617133 IER5LQ5T953 404 aa11.23□□□□□ -0.61
SEM1-217ENST00000617133 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
SEM1-217ENST00000617133 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
SEM1-217ENST00000617133 PDCD7Q8N8D1 485 aaKnown RBP11.22□□□□□ -0.61
SEM1-217ENST00000617133 DPY19L2Q6NUT2 758 aa11.21□□□□□ -0.61
SEM1-217ENST00000617133 BCANQ96GW7 911 aa11.19□□□□□ -0.62
SEM1-217ENST00000617133 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
SEM1-217ENST00000617133 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
SEM1-217ENST00000617133 PLCG2P16885 1265 aa11.15□□□□□ -0.62
SEM1-217ENST00000617133 WDR70Q9NW82 654 aa11.15□□□□□ -0.62
SEM1-217ENST00000617133 NCKAP5LQ9HCH0 1330 aa11.14□□□□□ -0.63
SEM1-217ENST00000617133 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
SEM1-217ENST00000617133 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
SEM1-217ENST00000617133 COLQQ9Y215 455 aaPredicted RBP11.12□□□□□ -0.63
SEM1-217ENST00000617133 SEC24BO95487 1268 aa11.11□□□□□ -0.63
SEM1-217ENST00000617133 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
SEM1-217ENST00000617133 C7P10643 843 aa11.1□□□□□ -0.63
SEM1-217ENST00000617133 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
SEM1-217ENST00000617133 PDE4AP27815 886 aa11.09□□□□□ -0.63
SEM1-217ENST00000617133 LARP6Q9BRS8 491 aaKnown RBP11.09□□□□□ -0.63
SEM1-217ENST00000617133 METRNQ9UJH8 293 aa11.09□□□□□ -0.63
SEM1-217ENST00000617133 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
SEM1-217ENST00000617133 P3H3Q8IVL6 736 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms