RNA–Protein interactions for RNA: ENST00000616373.1

LINC00943-208, long intergenic non-protein coding RNA 943, humanhuman

TSL 2

Gene LINC00943, Length 420 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-208ENST00000616373 CCDC61Q9Y6R9 512 aa12.2□□□□□ -0.46
LINC00943-208ENST00000616373 NUBP1P53384 320 aa12.16□□□□□ -0.46
LINC00943-208ENST00000616373 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
LINC00943-208ENST00000616373 FAM212AQ96EL1 285 aa12.13□□□□□ -0.47
LINC00943-208ENST00000616373 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
LINC00943-208ENST00000616373 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
LINC00943-208ENST00000616373 KIF12Q96FN5 646 aa12.1□□□□□ -0.47
LINC00943-208ENST00000616373 MAP3K13O43283 966 aa12.04□□□□□ -0.48
LINC00943-208ENST00000616373 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
LINC00943-208ENST00000616373 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
LINC00943-208ENST00000616373 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
LINC00943-208ENST00000616373 LHX8Q68G74 356 aa11.99□□□□□ -0.49
LINC00943-208ENST00000616373 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
LINC00943-208ENST00000616373 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
LINC00943-208ENST00000616373 GSE1Q14687 1217 aa11.97□□□□□ -0.49
LINC00943-208ENST00000616373 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
LINC00943-208ENST00000616373 TIE1P35590 1138 aa11.94□□□□□ -0.5
LINC00943-208ENST00000616373 SPOCK2Q92563 424 aa11.94□□□□□ -0.5
LINC00943-208ENST00000616373 PELP1Q8IZL8 1130 aaKnown RBP11.92□□□□□ -0.5
LINC00943-208ENST00000616373 BMP2KQ9NSY1 1161 aaPredicted RBP11.91□□□□□ -0.5
LINC00943-208ENST00000616373 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
LINC00943-208ENST00000616373 PYGBP11216 843 aa11.9□□□□□ -0.5
LINC00943-208ENST00000616373 IFNL1Q8IU54 200 aa11.9□□□□□ -0.5
LINC00943-208ENST00000616373 SLC39A7Q92504 469 aa11.9□□□□□ -0.5
LINC00943-208ENST00000616373 ATN1P54259 1190 aaPredicted RBP11.89□□□□□ -0.51
LINC00943-208ENST00000616373 C7P10643 843 aa11.88□□□□□ -0.51
LINC00943-208ENST00000616373 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
LINC00943-208ENST00000616373 TTLL13PA6NNM8 815 aa11.86□□□□□ -0.51
LINC00943-208ENST00000616373 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
LINC00943-208ENST00000616373 CIZ1Q9ULV3 898 aaPredicted RBP11.82□□□□□ -0.52
LINC00943-208ENST00000616373 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
LINC00943-208ENST00000616373 TMEM106CQ9BVX2 250 aa11.79□□□□□ -0.52
LINC00943-208ENST00000616373 PCDHB8Q9UN66 801 aa11.78□□□□□ -0.52
LINC00943-208ENST00000616373 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
LINC00943-208ENST00000616373 IER5LQ5T953 404 aa11.76□□□□□ -0.53
LINC00943-208ENST00000616373 POTEB2H3BUK9 544 aa11.75□□□□□ -0.53
LINC00943-208ENST00000616373 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
LINC00943-208ENST00000616373 SEC24BO95487 1268 aa11.71□□□□□ -0.53
LINC00943-208ENST00000616373 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
LINC00943-208ENST00000616373 MAMSTRQ6ZN01 415 aa11.68□□□□□ -0.54
LINC00943-208ENST00000616373 OTUD5Q96G74 571 aa11.68□□□□□ -0.54
LINC00943-208ENST00000616373 PSEN1P49768 467 aa11.65□□□□□ -0.54
LINC00943-208ENST00000616373 PDAP1Q13442 181 aaKnown RBP11.65□□□□□ -0.54
LINC00943-208ENST00000616373 COLQQ9Y215 455 aaPredicted RBP11.65□□□□□ -0.54
LINC00943-208ENST00000616373 POTEJP0CG39 1038 aa11.63□□□□□ -0.55
LINC00943-208ENST00000616373 SCUBE2Q9NQ36 999 aa11.63□□□□□ -0.55
LINC00943-208ENST00000616373 PLCG2P16885 1265 aa11.62□□□□□ -0.55
LINC00943-208ENST00000616373 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
LINC00943-208ENST00000616373 IRX5P78411 483 aaPredicted RBP11.6□□□□□ -0.55
LINC00943-208ENST00000616373 OCEL1Q9H607 264 aa11.58□□□□□ -0.56
LINC00943-208ENST00000616373 MKRN3Q13064 507 aaKnown RBP11.57□□□□□ -0.56
LINC00943-208ENST00000616373 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
LINC00943-208ENST00000616373 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
LINC00943-208ENST00000616373 CABP2Q9NPB3 220 aa11.5□□□□□ -0.57
LINC00943-208ENST00000616373 VGFO15240 615 aaPredicted RBP11.48□□□□□ -0.57
LINC00943-208ENST00000616373 PDCD7Q8N8D1 485 aaKnown RBP11.48□□□□□ -0.57
LINC00943-208ENST00000616373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.57
LINC00943-208ENST00000616373 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
LINC00943-208ENST00000616373 ECM2O94769 699 aaPredicted RBP11.45□□□□□ -0.58
LINC00943-208ENST00000616373 ILDR1Q86SU0 546 aaPredicted RBP11.44□□□□□ -0.58
LINC00943-208ENST00000616373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
LINC00943-208ENST00000616373 L3MBTL3Q96JM7 780 aaPredicted RBP11.42□□□□□ -0.58
LINC00943-208ENST00000616373 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
LINC00943-208ENST00000616373 PKD2Q13563 968 aa11.41□□□□□ -0.58
LINC00943-208ENST00000616373 SLAIN1Q8ND83 568 aa11.39□□□□□ -0.59
LINC00943-208ENST00000616373 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
LINC00943-208ENST00000616373 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.38□□□□□ -0.59
LINC00943-208ENST00000616373 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
LINC00943-208ENST00000616373 SOX12O15370 315 aa11.34□□□□□ -0.59
LINC00943-208ENST00000616373 G3V3G9 751 aa11.33□□□□□ -0.6
LINC00943-208ENST00000616373 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
LINC00943-208ENST00000616373 RGL2O15211 777 aa11.31□□□□□ -0.6
LINC00943-208ENST00000616373 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
LINC00943-208ENST00000616373 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
LINC00943-208ENST00000616373 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
LINC00943-208ENST00000616373 STK25O00506 426 aa11.29□□□□□ -0.6
LINC00943-208ENST00000616373 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
LINC00943-208ENST00000616373 POTEMA6NI47 508 aa11.28□□□□□ -0.6
LINC00943-208ENST00000616373 SNPHO15079 494 aa11.26□□□□□ -0.61
LINC00943-208ENST00000616373 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
LINC00943-208ENST00000616373 LCE2DQ5TA82 110 aaPredicted RBP11.25□□□□□ -0.61
LINC00943-208ENST00000616373 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
LINC00943-208ENST00000616373 NLRP6P59044 892 aa11.23□□□□□ -0.61
LINC00943-208ENST00000616373 TMEM121BQ9BXQ6 578 aaPredicted RBP11.23□□□□□ -0.61
LINC00943-208ENST00000616373 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
LINC00943-208ENST00000616373 MICALL2Q8IY33 904 aa11.19□□□□□ -0.62
LINC00943-208ENST00000616373 FBXO22Q8NEZ5 403 aa11.18□□□□□ -0.62
LINC00943-208ENST00000616373 ST18O60284 1047 aa11.17□□□□□ -0.62
LINC00943-208ENST00000616373 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
LINC00943-208ENST00000616373 PCDH10Q9P2E7 1040 aa11.14□□□□□ -0.63
LINC00943-208ENST00000616373 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
LINC00943-208ENST00000616373 CHGAP10645 457 aaKnown RBP11.07□□□□□ -0.64
LINC00943-208ENST00000616373 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
LINC00943-208ENST00000616373 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
LINC00943-208ENST00000616373 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
LINC00943-208ENST00000616373 ZNF710Q8N1W2 664 aa11.02□□□□□ -0.65
LINC00943-208ENST00000616373 RIMBP2O15034 1052 aa11.01□□□□□ -0.65
LINC00943-208ENST00000616373 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
LINC00943-208ENST00000616373 DNAJC5Q9H3Z4 198 aa11.01□□□□□ -0.65
LINC00943-208ENST00000616373 EMP3P54852 163 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms