RNA–Protein interactions for RNA: ENST00000613533.4

PER3-208, Transcript of period circadian regulator 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PER3, Length 6,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PER3-208ENST00000613533 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
PER3-208ENST00000613533 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
PER3-208ENST00000613533 CCDC136Q96JN2 1154 aa17.47■□□□□ 0.39
PER3-208ENST00000613533 CSRNP3Q8WYN3 585 aa17.46■□□□□ 0.39
PER3-208ENST00000613533 CHMP7Q8WUX9 453 aaPredicted RBP17.46■□□□□ 0.39
PER3-208ENST00000613533 NBR1Q14596 966 aa17.46■□□□□ 0.39
PER3-208ENST00000613533 NCLP19338 710 aaKnown RBP17.39■□□□□ 0.38
PER3-208ENST00000613533 ZRSR1Q15695 479 aaKnown RBP17.38■□□□□ 0.37
PER3-208ENST00000613533 TRHP20396 242 aaPredicted RBP17.38■□□□□ 0.37
PER3-208ENST00000613533 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
PER3-208ENST00000613533 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
PER3-208ENST00000613533 LAS1LQ9Y4W2 734 aaKnown RBP17.35■□□□□ 0.37
PER3-208ENST00000613533 CLSTN1O94985 981 aa17.34■□□□□ 0.37
PER3-208ENST00000613533 IRX6P78412 446 aaPredicted RBP17.34■□□□□ 0.37
PER3-208ENST00000613533 RGL3Q3MIN7 710 aa17.34■□□□□ 0.37
PER3-208ENST00000613533 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
PER3-208ENST00000613533 GOLGA2Q08379 1002 aa17.3■□□□□ 0.36
PER3-208ENST00000613533 GLIPR1L2Q4G1C9 344 aa17.27■□□□□ 0.36
PER3-208ENST00000613533 ISY1Q9ULR0 285 aaKnown RBP17.27■□□□□ 0.36
PER3-208ENST00000613533 NAP1L2Q9ULW6 460 aaPredicted RBP17.26■□□□□ 0.35
PER3-208ENST00000613533 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
PER3-208ENST00000613533 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
PER3-208ENST00000613533 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
PER3-208ENST00000613533 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
PER3-208ENST00000613533 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
PER3-208ENST00000613533 MTUS2Q5JR59 1369 aa17.22■□□□□ 0.35
PER3-208ENST00000613533 PTMAP06454 111 aaKnown RBP17.21■□□□□ 0.35
PER3-208ENST00000613533 CASC1Q6TDU7 716 aa17.21■□□□□ 0.35
PER3-208ENST00000613533 POGKQ9P215 609 aa17.21■□□□□ 0.35
PER3-208ENST00000613533 SOX12O15370 315 aa17.21■□□□□ 0.35
PER3-208ENST00000613533 FGD1P98174 961 aa17.2■□□□□ 0.34
PER3-208ENST00000613533 TRIM44Q96DX7 344 aaPredicted RBP17.19■□□□□ 0.34
PER3-208ENST00000613533 GOLGA6L22H0YM25 854 aa17.19■□□□□ 0.34
PER3-208ENST00000613533 TNNT2P45379 298 aaPredicted RBP17.19■□□□□ 0.34
PER3-208ENST00000613533 FTSJ3Q8IY81 847 aaKnown RBP17.19■□□□□ 0.34
PER3-208ENST00000613533 MLECQ14165 292 aa17.19■□□□□ 0.34
PER3-208ENST00000613533 PLCB2Q00722 1185 aa17.17■□□□□ 0.34
PER3-208ENST00000613533 BECN1Q14457 450 aa17.16■□□□□ 0.34
PER3-208ENST00000613533 PLEKHD1A6NEE1 506 aa17.16■□□□□ 0.34
PER3-208ENST00000613533 DNTTIP2Q5QJE6 756 aaKnown RBP17.15■□□□□ 0.34
PER3-208ENST00000613533 MAPK8IP3Q9UPT6 1336 aa17.15■□□□□ 0.34
PER3-208ENST00000613533 KCNJ4P48050 445 aa17.13■□□□□ 0.33
PER3-208ENST00000613533 KNSTRNQ9Y448 316 aa17.12■□□□□ 0.33
PER3-208ENST00000613533 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
PER3-208ENST00000613533 U2SURPO15042 1029 aaKnown RBP17.08■□□□□ 0.32
PER3-208ENST00000613533 ZNF330Q9Y3S2 320 aaPredicted RBP17.07■□□□□ 0.32
PER3-208ENST00000613533 PRM3Q9NNZ6 103 aa17.07■□□□□ 0.32
PER3-208ENST00000613533 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
PER3-208ENST00000613533 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
PER3-208ENST00000613533 NUDCQ9Y266 331 aa17.05■□□□□ 0.32
PER3-208ENST00000613533 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
PER3-208ENST00000613533 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.31
PER3-208ENST00000613533 CDCA8Q53HL2 280 aa17.02■□□□□ 0.31
PER3-208ENST00000613533 SCRIBQ14160 1630 aa17.01■□□□□ 0.31
PER3-208ENST00000613533 SAFB2Q14151 953 aaKnown RBP eCLIP16.99■□□□□ 0.31
PER3-208ENST00000613533 CARD11Q9BXL7 1154 aa16.99■□□□□ 0.31
PER3-208ENST00000613533 CFDP1Q9UEE9 299 aaPredicted RBP16.98■□□□□ 0.31
PER3-208ENST00000613533 TMX4Q9H1E5 349 aaPredicted RBP16.98■□□□□ 0.31
PER3-208ENST00000613533 GOLGA6L6A8MZA4 724 aa16.97■□□□□ 0.31
PER3-208ENST00000613533 RGS3P49796 1198 aa16.97■□□□□ 0.31
PER3-208ENST00000613533 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
PER3-208ENST00000613533 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
PER3-208ENST00000613533 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.3
PER3-208ENST00000613533 CC2D1BQ5T0F9 858 aaKnown RBP16.95■□□□□ 0.3
PER3-208ENST00000613533 ANP32EQ9BTT0 268 aa16.94■□□□□ 0.3
PER3-208ENST00000613533 GOLGA6L4A6NEF3 574 aa16.94■□□□□ 0.3
PER3-208ENST00000613533 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
PER3-208ENST00000613533 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
PER3-208ENST00000613533 GNL2Q13823 731 aaKnown RBP16.92■□□□□ 0.3
PER3-208ENST00000613533 PDE4CQ08493 712 aa16.91■□□□□ 0.3
PER3-208ENST00000613533 G3V3G9 751 aa16.9■□□□□ 0.3
PER3-208ENST00000613533 DCAF8Q5TAQ9 597 aa16.9■□□□□ 0.3
PER3-208ENST00000613533 HDGFP51858 240 aaKnown RBP16.88■□□□□ 0.29
PER3-208ENST00000613533 APBB1O00213 710 aa16.88■□□□□ 0.29
PER3-208ENST00000613533 RTF1Q92541 710 aaKnown RBP16.87■□□□□ 0.29
PER3-208ENST00000613533 STK26Q9P289 416 aa16.87■□□□□ 0.29
PER3-208ENST00000613533 NRDCO43847 1150 aa16.87■□□□□ 0.29
PER3-208ENST00000613533 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
PER3-208ENST00000613533 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
PER3-208ENST00000613533 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.29
PER3-208ENST00000613533 MIER1Q8N108 512 aa16.83■□□□□ 0.28
PER3-208ENST00000613533 ERCC6Q03468 1493 aa16.83■□□□□ 0.28
PER3-208ENST00000613533 CHMP4BQ9H444 224 aaKnown RBP16.82■□□□□ 0.28
PER3-208ENST00000613533 DRC7Q8IY82 874 aa16.82■□□□□ 0.28
PER3-208ENST00000613533 GGT6Q6P531 493 aa16.81■□□□□ 0.28
PER3-208ENST00000613533 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
PER3-208ENST00000613533 SPRYD3Q8NCJ5 442 aa16.81■□□□□ 0.28
PER3-208ENST00000613533 CHMP3Q9Y3E7 222 aa16.81■□□□□ 0.28
PER3-208ENST00000613533 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
PER3-208ENST00000613533 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
PER3-208ENST00000613533 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
PER3-208ENST00000613533 SUPT16HQ9Y5B9 1047 aaKnown RBP16.78■□□□□ 0.28
PER3-208ENST00000613533 NOC3LQ8WTT2 800 aaKnown RBP16.78■□□□□ 0.28
PER3-208ENST00000613533 MCCP23508 829 aa16.77■□□□□ 0.27
PER3-208ENST00000613533 GORABQ5T7V8 394 aa16.77■□□□□ 0.27
PER3-208ENST00000613533 TAF7LQ5H9L4 462 aa16.76■□□□□ 0.27
PER3-208ENST00000613533 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
PER3-208ENST00000613533 MS4A1P11836 297 aa16.75■□□□□ 0.27
PER3-208ENST00000613533 ZCCHC6Q5VYS8 1495 aaKnown RBP16.75■□□□□ 0.27
PER3-208ENST00000613533 MSH5O43196 834 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms