RNA–Protein interactions for RNA: ENST00000613302.4

RUNX1T1-248, Transcript of RUNX1 translocation partner 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RUNX1T1, Length 7,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-248ENST00000613302 LAS1LQ9Y4W2 734 aaKnown RBP12.26□□□□□ -0.45
RUNX1T1-248ENST00000613302 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
RUNX1T1-248ENST00000613302 ZNF330Q9Y3S2 320 aaPredicted RBP12.24□□□□□ -0.45
RUNX1T1-248ENST00000613302 RGL3Q3MIN7 710 aa12.24□□□□□ -0.45
RUNX1T1-248ENST00000613302 ANO8Q9HCE9 1232 aaPredicted RBP12.21□□□□□ -0.45
RUNX1T1-248ENST00000613302 GOLGA2Q08379 1002 aa12.21□□□□□ -0.46
RUNX1T1-248ENST00000613302 TNNT2P45379 298 aaPredicted RBP12.19□□□□□ -0.46
RUNX1T1-248ENST00000613302 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
RUNX1T1-248ENST00000613302 PRM3Q9NNZ6 103 aa12.18□□□□□ -0.46
RUNX1T1-248ENST00000613302 HIRIP3Q9BW71 556 aaPredicted RBP12.17□□□□□ -0.46
RUNX1T1-248ENST00000613302 NAP1L2Q9ULW6 460 aaPredicted RBP12.17□□□□□ -0.46
RUNX1T1-248ENST00000613302 TSPY4P0CV99 314 aa12.15□□□□□ -0.46
RUNX1T1-248ENST00000613302 TSPY10P0CW01 314 aa12.15□□□□□ -0.46
RUNX1T1-248ENST00000613302 ANP32BQ92688 251 aaKnown RBP12.15□□□□□ -0.46
RUNX1T1-248ENST00000613302 MSH5O43196 834 aa12.14□□□□□ -0.47
RUNX1T1-248ENST00000613302 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
RUNX1T1-248ENST00000613302 SAFB2Q14151 953 aaKnown RBP eCLIP12.14□□□□□ -0.47
RUNX1T1-248ENST00000613302 MYH16Q9H6N6 1097 aa12.14□□□□□ -0.47
RUNX1T1-248ENST00000613302 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
RUNX1T1-248ENST00000613302 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
RUNX1T1-248ENST00000613302 UPF2Q9HAU5 1272 aaKnown RBP12.11□□□□□ -0.47
RUNX1T1-248ENST00000613302 POGKQ9P215 609 aa12.11□□□□□ -0.47
RUNX1T1-248ENST00000613302 KRI1Q8N9T8 703 aaKnown RBP12.09□□□□□ -0.47
RUNX1T1-248ENST00000613302 NBR1Q14596 966 aa12.09□□□□□ -0.47
RUNX1T1-248ENST00000613302 RRP7BPQ9NSQ0 103 aa12.08□□□□□ -0.48
RUNX1T1-248ENST00000613302 MEX3CQ5U5Q3 659 aaKnown RBP12.08□□□□□ -0.48
RUNX1T1-248ENST00000613302 ANP32AP39687 249 aaKnown RBP12.08□□□□□ -0.48
RUNX1T1-248ENST00000613302 CSB-PGBD3P0DP91 1061 aa12.07□□□□□ -0.48
RUNX1T1-248ENST00000613302 PDE4CQ08493 712 aa12.06□□□□□ -0.48
RUNX1T1-248ENST00000613302 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
RUNX1T1-248ENST00000613302 TONSLQ96HA7 1378 aa12.06□□□□□ -0.48
RUNX1T1-248ENST00000613302 IRX6P78412 446 aaPredicted RBP12.06□□□□□ -0.48
RUNX1T1-248ENST00000613302 OS9Q13438 667 aaPredicted RBP12.06□□□□□ -0.48
RUNX1T1-248ENST00000613302 G3V3G9 751 aa12.06□□□□□ -0.48
RUNX1T1-248ENST00000613302 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
RUNX1T1-248ENST00000613302 HNRNPUQ00839 825 aaKnown RBP eCLIP12.05□□□□□ -0.48
RUNX1T1-248ENST00000613302 DDX10Q13206 875 aaKnown RBP12.03□□□□□ -0.48
RUNX1T1-248ENST00000613302 TMX4Q9H1E5 349 aaPredicted RBP12.02□□□□□ -0.48
RUNX1T1-248ENST00000613302 STK26Q9P289 416 aa12.02□□□□□ -0.49
RUNX1T1-248ENST00000613302 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.01□□□□□ -0.49
RUNX1T1-248ENST00000613302 SCRIBQ14160 1630 aa12□□□□□ -0.49
RUNX1T1-248ENST00000613302 FBXO3Q9UK99 471 aa12□□□□□ -0.49
RUNX1T1-248ENST00000613302 NCLP19338 710 aaKnown RBP12□□□□□ -0.49
RUNX1T1-248ENST00000613302 FGD1P98174 961 aa11.98□□□□□ -0.49
RUNX1T1-248ENST00000613302 NUTM2FA1L443 756 aa11.98□□□□□ -0.49
RUNX1T1-248ENST00000613302 U2SURPO15042 1029 aaKnown RBP11.97□□□□□ -0.49
RUNX1T1-248ENST00000613302 PPP1R1BQ9UD71 204 aaPredicted RBP11.96□□□□□ -0.49
RUNX1T1-248ENST00000613302 ZRSR1Q15695 479 aaKnown RBP11.96□□□□□ -0.49
RUNX1T1-248ENST00000613302 GTF3C3Q9Y5Q9 886 aa11.96□□□□□ -0.49
RUNX1T1-248ENST00000613302 DCAF8L1A6NGE4 600 aa11.96□□□□□ -0.49
RUNX1T1-248ENST00000613302 PLEKHD1A6NEE1 506 aa11.95□□□□□ -0.5
RUNX1T1-248ENST00000613302 FKBP8Q14318 412 aa11.95□□□□□ -0.5
RUNX1T1-248ENST00000613302 GGT6Q6P531 493 aa11.94□□□□□ -0.5
RUNX1T1-248ENST00000613302 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
RUNX1T1-248ENST00000613302 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
RUNX1T1-248ENST00000613302 KCNJ4P48050 445 aa11.92□□□□□ -0.5
RUNX1T1-248ENST00000613302 PLCB2Q00722 1185 aa11.92□□□□□ -0.5
RUNX1T1-248ENST00000613302 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
RUNX1T1-248ENST00000613302 CHMP3Q9Y3E7 222 aa11.91□□□□□ -0.5
RUNX1T1-248ENST00000613302 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
RUNX1T1-248ENST00000613302 SRPK2P78362 688 aaKnown RBP11.9□□□□□ -0.5
RUNX1T1-248ENST00000613302 FTSJ3Q8IY81 847 aaKnown RBP11.89□□□□□ -0.51
RUNX1T1-248ENST00000613302 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
RUNX1T1-248ENST00000613302 APBB1O00213 710 aa11.89□□□□□ -0.51
RUNX1T1-248ENST00000613302 MRS2Q9HD23 443 aa11.88□□□□□ -0.51
RUNX1T1-248ENST00000613302 MAPK8IP3Q9UPT6 1336 aa11.87□□□□□ -0.51
RUNX1T1-248ENST00000613302 VPS53Q5VIR6 699 aa11.87□□□□□ -0.51
RUNX1T1-248ENST00000613302 RAD21O60216 631 aa11.87□□□□□ -0.51
RUNX1T1-248ENST00000613302 LTV1Q96GA3 475 aaPredicted RBP11.87□□□□□ -0.51
RUNX1T1-248ENST00000613302 FBXW7Q969H0 707 aa11.86□□□□□ -0.51
RUNX1T1-248ENST00000613302 CC2D1BQ5T0F9 858 aaKnown RBP11.86□□□□□ -0.51
RUNX1T1-248ENST00000613302 FRAT1Q92837 279 aaPredicted RBP11.86□□□□□ -0.51
RUNX1T1-248ENST00000613302 GTF2E1P29083 439 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-248ENST00000613302 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
RUNX1T1-248ENST00000613302 CFAP53Q96M91 514 aa11.85□□□□□ -0.51
RUNX1T1-248ENST00000613302 CNKSR2Q8WXI2 1034 aa11.85□□□□□ -0.51
RUNX1T1-248ENST00000613302 ERICH6BQ5W0A0 696 aa11.84□□□□□ -0.51
RUNX1T1-248ENST00000613302 SYTL4Q96C24 671 aaPredicted RBP11.84□□□□□ -0.51
RUNX1T1-248ENST00000613302 EVA1CP58658 441 aa11.82□□□□□ -0.52
RUNX1T1-248ENST00000613302 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
RUNX1T1-248ENST00000613302 KNSTRNQ9Y448 316 aa11.82□□□□□ -0.52
RUNX1T1-248ENST00000613302 CFDP1Q9UEE9 299 aaPredicted RBP11.81□□□□□ -0.52
RUNX1T1-248ENST00000613302 CWC22Q9HCG8 908 aaKnown RBP11.81□□□□□ -0.52
RUNX1T1-248ENST00000613302 CASC1Q6TDU7 716 aa11.8□□□□□ -0.52
RUNX1T1-248ENST00000613302 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
RUNX1T1-248ENST00000613302 EIF4G2P78344 907 aaKnown RBP eCLIP11.79□□□□□ -0.52
RUNX1T1-248ENST00000613302 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
RUNX1T1-248ENST00000613302 CYB5RLQ6IPT4 315 aa11.78□□□□□ -0.52
RUNX1T1-248ENST00000613302 PTMAP06454 111 aaKnown RBP11.78□□□□□ -0.52
RUNX1T1-248ENST00000613302 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.52
RUNX1T1-248ENST00000613302 EIF4G1Q04637 1599 aaKnown RBP11.77□□□□□ -0.53
RUNX1T1-248ENST00000613302 NGEFQ8N5V2 710 aa11.75□□□□□ -0.53
RUNX1T1-248ENST00000613302 DNTTIP2Q5QJE6 756 aaKnown RBP11.75□□□□□ -0.53
RUNX1T1-248ENST00000613302 GORABQ5T7V8 394 aa11.75□□□□□ -0.53
RUNX1T1-248ENST00000613302 CARD11Q9BXL7 1154 aa11.74□□□□□ -0.53
RUNX1T1-248ENST00000613302 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
RUNX1T1-248ENST00000613302 CREBRFQ8IUR6 639 aa11.74□□□□□ -0.53
RUNX1T1-248ENST00000613302 PIP4K2BP78356 416 aa11.73□□□□□ -0.53
RUNX1T1-248ENST00000613302 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
RUNX1T1-248ENST00000613302 NUDCQ9Y266 331 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms