RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
TNXB-209ENST00000613214 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
TNXB-209ENST00000613214 NPHP1O15259 732 aa20.68■□□□□ 0.9
TNXB-209ENST00000613214 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.65■□□□□ 0.9
TNXB-209ENST00000613214 ACIN1Q9UKV3 1341 aaKnown RBP20.64■□□□□ 0.9
TNXB-209ENST00000613214 MYH16Q9H6N6 1097 aa20.64■□□□□ 0.89
TNXB-209ENST00000613214 LAS1LQ9Y4W2 734 aaKnown RBP20.63■□□□□ 0.89
TNXB-209ENST00000613214 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
TNXB-209ENST00000613214 AMER1Q5JTC6 1135 aaPredicted RBP20.59■□□□□ 0.89
TNXB-209ENST00000613214 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
TNXB-209ENST00000613214 MRS2Q9HD23 443 aa20.56■□□□□ 0.88
TNXB-209ENST00000613214 NEUROD2Q15784 382 aa20.52■□□□□ 0.88
TNXB-209ENST00000613214 CSRNP3Q8WYN3 585 aa20.52■□□□□ 0.88
TNXB-209ENST00000613214 TNNT2P45379 298 aaPredicted RBP20.5■□□□□ 0.87
TNXB-209ENST00000613214 RRP7BPQ9NSQ0 103 aa20.5■□□□□ 0.87
TNXB-209ENST00000613214 CLSTN1O94985 981 aa20.49■□□□□ 0.87
TNXB-209ENST00000613214 SOX12O15370 315 aa20.48■□□□□ 0.87
TNXB-209ENST00000613214 NAP1L2Q9ULW6 460 aaPredicted RBP20.47■□□□□ 0.87
TNXB-209ENST00000613214 CHMP7Q8WUX9 453 aaPredicted RBP20.44■□□□□ 0.86
TNXB-209ENST00000613214 TSPY4P0CV99 314 aa20.44■□□□□ 0.86
TNXB-209ENST00000613214 TSPY10P0CW01 314 aa20.44■□□□□ 0.86
TNXB-209ENST00000613214 PLCB2Q00722 1185 aa20.43■□□□□ 0.86
TNXB-209ENST00000613214 ISY1Q9ULR0 285 aaKnown RBP20.39■□□□□ 0.85
TNXB-209ENST00000613214 ZRSR1Q15695 479 aaKnown RBP20.37■□□□□ 0.85
TNXB-209ENST00000613214 PTMAP06454 111 aaKnown RBP20.37■□□□□ 0.85
TNXB-209ENST00000613214 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
TNXB-209ENST00000613214 DNTTIP2Q5QJE6 756 aaKnown RBP20.35■□□□□ 0.85
TNXB-209ENST00000613214 GLIPR1L2Q4G1C9 344 aa20.35■□□□□ 0.85
TNXB-209ENST00000613214 TRIM44Q96DX7 344 aaPredicted RBP20.33■□□□□ 0.85
TNXB-209ENST00000613214 MLECQ14165 292 aa20.33■□□□□ 0.85
TNXB-209ENST00000613214 RTN4Q9NQC3 1192 aaKnown RBP20.31■□□□□ 0.84
TNXB-209ENST00000613214 OS9Q13438 667 aaPredicted RBP20.3■□□□□ 0.84
TNXB-209ENST00000613214 FTSJ3Q8IY81 847 aaKnown RBP20.29■□□□□ 0.84
TNXB-209ENST00000613214 GOLGA2Q08379 1002 aa20.28■□□□□ 0.84
TNXB-209ENST00000613214 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.84
TNXB-209ENST00000613214 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.26■□□□□ 0.83
TNXB-209ENST00000613214 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
TNXB-209ENST00000613214 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
TNXB-209ENST00000613214 MTUS2Q5JR59 1369 aa20.24■□□□□ 0.83
TNXB-209ENST00000613214 FGD1P98174 961 aa20.24■□□□□ 0.83
TNXB-209ENST00000613214 MIER1Q8N108 512 aa20.23■□□□□ 0.83
TNXB-209ENST00000613214 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
TNXB-209ENST00000613214 SPRYD3Q8NCJ5 442 aa20.22■□□□□ 0.83
TNXB-209ENST00000613214 RGS3P49796 1198 aa20.22■□□□□ 0.83
TNXB-209ENST00000613214 CC2D1BQ5T0F9 858 aaKnown RBP20.22■□□□□ 0.83
TNXB-209ENST00000613214 POGKQ9P215 609 aa20.21■□□□□ 0.83
TNXB-209ENST00000613214 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
TNXB-209ENST00000613214 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
TNXB-209ENST00000613214 BECN1Q14457 450 aa20.2■□□□□ 0.82
TNXB-209ENST00000613214 CASC1Q6TDU7 716 aa20.2■□□□□ 0.82
TNXB-209ENST00000613214 KCNJ4P48050 445 aa20.18■□□□□ 0.82
TNXB-209ENST00000613214 PDE4CQ08493 712 aa20.18■□□□□ 0.82
TNXB-209ENST00000613214 GOLGA6L22H0YM25 854 aa20.16■□□□□ 0.82
TNXB-209ENST00000613214 CFAP53Q96M91 514 aa20.14■□□□□ 0.81
TNXB-209ENST00000613214 ERICH6BQ5W0A0 696 aa20.13■□□□□ 0.81
TNXB-209ENST00000613214 KNSTRNQ9Y448 316 aa20.13■□□□□ 0.81
TNXB-209ENST00000613214 MAPK8IP3Q9UPT6 1336 aa20.13■□□□□ 0.81
TNXB-209ENST00000613214 EIF4G2P78344 907 aaKnown RBP eCLIP20.13■□□□□ 0.81
TNXB-209ENST00000613214 APBB1O00213 710 aa20.13■□□□□ 0.81
TNXB-209ENST00000613214 PRM3Q9NNZ6 103 aa20.11■□□□□ 0.81
TNXB-209ENST00000613214 SUPT16HQ9Y5B9 1047 aaKnown RBP20.09■□□□□ 0.81
TNXB-209ENST00000613214 NAP1L5Q96NT1 182 aaPredicted RBP20.09■□□□□ 0.81
TNXB-209ENST00000613214 HSP90AB1P08238 724 aaKnown RBP20.06■□□□□ 0.8
TNXB-209ENST00000613214 DDRGK1Q96HY6 314 aa20.05■□□□□ 0.8
TNXB-209ENST00000613214 CCDC9Q9Y3X0 531 aaKnown RBP20.05■□□□□ 0.8
TNXB-209ENST00000613214 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
TNXB-209ENST00000613214 PAK3O75914 559 aaPredicted RBP20.04■□□□□ 0.8
TNXB-209ENST00000613214 ARID3AQ99856 593 aa20.03■□□□□ 0.8
TNXB-209ENST00000613214 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
TNXB-209ENST00000613214 STK26Q9P289 416 aa20.02■□□□□ 0.8
TNXB-209ENST00000613214 SRPK2P78362 688 aaKnown RBP19.95■□□□□ 0.78
TNXB-209ENST00000613214 DRC7Q8IY82 874 aa19.94■□□□□ 0.78
TNXB-209ENST00000613214 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
TNXB-209ENST00000613214 GNL2Q13823 731 aaKnown RBP19.92■□□□□ 0.78
TNXB-209ENST00000613214 NUDCQ9Y266 331 aa19.92■□□□□ 0.78
TNXB-209ENST00000613214 GOLGA6L4A6NEF3 574 aa19.91■□□□□ 0.78
TNXB-209ENST00000613214 CSB-PGBD3P0DP91 1061 aa19.91■□□□□ 0.78
TNXB-209ENST00000613214 FBXO3Q9UK99 471 aa19.91■□□□□ 0.78
TNXB-209ENST00000613214 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
TNXB-209ENST00000613214 CHMP3Q9Y3E7 222 aa19.88■□□□□ 0.77
TNXB-209ENST00000613214 B4GALNT3Q6L9W6 998 aa19.88■□□□□ 0.77
TNXB-209ENST00000613214 ZCCHC6Q5VYS8 1495 aaKnown RBP19.87■□□□□ 0.77
TNXB-209ENST00000613214 GOLGA6L6A8MZA4 724 aa19.86■□□□□ 0.77
TNXB-209ENST00000613214 CREBRFQ8IUR6 639 aa19.84■□□□□ 0.77
TNXB-209ENST00000613214 WWC1Q8IX03 1113 aa19.83■□□□□ 0.77
TNXB-209ENST00000613214 NUTM2DQ5VT03 806 aaPredicted RBP19.83■□□□□ 0.76
TNXB-209ENST00000613214 GGT6Q6P531 493 aa19.81■□□□□ 0.76
TNXB-209ENST00000613214 RTF1Q92541 710 aaKnown RBP19.8■□□□□ 0.76
TNXB-209ENST00000613214 DCAF11Q8TEB1 546 aa19.8■□□□□ 0.76
TNXB-209ENST00000613214 G3V3G9 751 aa19.79■□□□□ 0.76
TNXB-209ENST00000613214 DCAF8Q5TAQ9 597 aa19.79■□□□□ 0.76
TNXB-209ENST00000613214 NUTM2FA1L443 756 aa19.79■□□□□ 0.76
TNXB-209ENST00000613214 CDCA8Q53HL2 280 aa19.79■□□□□ 0.76
TNXB-209ENST00000613214 HSP90B1P14625 803 aaKnown RBP19.78■□□□□ 0.76
TNXB-209ENST00000613214 NOC3LQ8WTT2 800 aaKnown RBP19.77■□□□□ 0.76
TNXB-209ENST00000613214 NOL8Q76FK4 1167 aaKnown RBP19.76■□□□□ 0.75
TNXB-209ENST00000613214 ERCC6Q03468 1493 aa19.75■□□□□ 0.75
TNXB-209ENST00000613214 PNNQ9H307 717 aaKnown RBP19.75■□□□□ 0.75
TNXB-209ENST00000613214 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
TNXB-209ENST00000613214 GZF1Q9H116 711 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms