RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
TARDBP-214ENST00000613177 KIF12Q96FN5 646 aa14.22□□□□□ -0.13
TARDBP-214ENST00000613177 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
TARDBP-214ENST00000613177 NUBP1P53384 320 aa14.2□□□□□ -0.14
TARDBP-214ENST00000613177 ASTLQ6HA08 431 aaPredicted RBP14.18□□□□□ -0.14
TARDBP-214ENST00000613177 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
TARDBP-214ENST00000613177 FBXO3Q9UK99 471 aa14.18□□□□□ -0.14
TARDBP-214ENST00000613177 ATMINO43313 823 aaPredicted RBP14.14□□□□□ -0.15
TARDBP-214ENST00000613177 MAP3K13O43283 966 aa14.13□□□□□ -0.15
TARDBP-214ENST00000613177 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
TARDBP-214ENST00000613177 POTEB2H3BUK9 544 aa14.07□□□□□ -0.16
TARDBP-214ENST00000613177 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
TARDBP-214ENST00000613177 ATN1P54259 1190 aaPredicted RBP14.04□□□□□ -0.16
TARDBP-214ENST00000613177 FAM212AQ96EL1 285 aa14.04□□□□□ -0.16
TARDBP-214ENST00000613177 BMP2KQ9NSY1 1161 aaPredicted RBP14.04□□□□□ -0.16
TARDBP-214ENST00000613177 METRNQ9UJH8 293 aa14.03□□□□□ -0.16
TARDBP-214ENST00000613177 SLC39A7Q92504 469 aa14.02□□□□□ -0.17
TARDBP-214ENST00000613177 SGIP1Q9BQI5 828 aa14.02□□□□□ -0.17
TARDBP-214ENST00000613177 C7P10643 843 aa14.01□□□□□ -0.17
TARDBP-214ENST00000613177 TIE1P35590 1138 aa14.01□□□□□ -0.17
TARDBP-214ENST00000613177 OTUD5Q96G74 571 aa13.98□□□□□ -0.17
TARDBP-214ENST00000613177 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
TARDBP-214ENST00000613177 TTLL13PA6NNM8 815 aa13.94□□□□□ -0.18
TARDBP-214ENST00000613177 IFNL1Q8IU54 200 aa13.94□□□□□ -0.18
TARDBP-214ENST00000613177 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
TARDBP-214ENST00000613177 DCAF8Q5TAQ9 597 aa13.9□□□□□ -0.18
TARDBP-214ENST00000613177 POTEFA5A3E0 1075 aa13.89□□□□□ -0.19
TARDBP-214ENST00000613177 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
TARDBP-214ENST00000613177 PYGBP11216 843 aa13.85□□□□□ -0.19
TARDBP-214ENST00000613177 TRIM35Q9UPQ4 493 aa13.84□□□□□ -0.19
TARDBP-214ENST00000613177 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
TARDBP-214ENST00000613177 GSE1Q14687 1217 aa13.8□□□□□ -0.2
TARDBP-214ENST00000613177 TMEM106CQ9BVX2 250 aa13.8□□□□□ -0.2
TARDBP-214ENST00000613177 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-214ENST00000613177 IER5LQ5T953 404 aa13.79□□□□□ -0.2
TARDBP-214ENST00000613177 MAMSTRQ6ZN01 415 aa13.76□□□□□ -0.21
TARDBP-214ENST00000613177 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
TARDBP-214ENST00000613177 CHRM1P11229 460 aaPredicted RBP13.73□□□□□ -0.21
TARDBP-214ENST00000613177 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
TARDBP-214ENST00000613177 SEC24BO95487 1268 aa13.72□□□□□ -0.21
TARDBP-214ENST00000613177 SCUBE2Q9NQ36 999 aa13.69□□□□□ -0.22
TARDBP-214ENST00000613177 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
TARDBP-214ENST00000613177 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
TARDBP-214ENST00000613177 PLCG2P16885 1265 aa13.6□□□□□ -0.23
TARDBP-214ENST00000613177 CIZ1Q9ULV3 898 aaPredicted RBP13.59□□□□□ -0.23
TARDBP-214ENST00000613177 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
TARDBP-214ENST00000613177 PSEN1P49768 467 aa13.55□□□□□ -0.24
TARDBP-214ENST00000613177 LCE2DQ5TA82 110 aaPredicted RBP13.54□□□□□ -0.24
TARDBP-214ENST00000613177 PDAP1Q13442 181 aaKnown RBP13.51□□□□□ -0.25
TARDBP-214ENST00000613177 POTEMA6NI47 508 aa13.5□□□□□ -0.25
TARDBP-214ENST00000613177 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
TARDBP-214ENST00000613177 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
TARDBP-214ENST00000613177 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
TARDBP-214ENST00000613177 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
TARDBP-214ENST00000613177 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
TARDBP-214ENST00000613177 FAM163AQ96GL9 167 aaPredicted RBP13.44□□□□□ -0.26
TARDBP-214ENST00000613177 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
TARDBP-214ENST00000613177 SLAIN1Q8ND83 568 aa13.43□□□□□ -0.26
TARDBP-214ENST00000613177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.27
TARDBP-214ENST00000613177 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
TARDBP-214ENST00000613177 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-214ENST00000613177 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
TARDBP-214ENST00000613177 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-214ENST00000613177 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
TARDBP-214ENST00000613177 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
TARDBP-214ENST00000613177 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
TARDBP-214ENST00000613177 ST18O60284 1047 aa13.27□□□□□ -0.29
TARDBP-214ENST00000613177 C3orf67Q6ZVT6 689 aa13.26□□□□□ -0.29
TARDBP-214ENST00000613177 PLSCR2Q9NRY7 297 aa13.26□□□□□ -0.29
TARDBP-214ENST00000613177 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
TARDBP-214ENST00000613177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-214ENST00000613177 VGFO15240 615 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-214ENST00000613177 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
TARDBP-214ENST00000613177 SNPHO15079 494 aa13.19□□□□□ -0.3
TARDBP-214ENST00000613177 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
TARDBP-214ENST00000613177 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
TARDBP-214ENST00000613177 SOX12O15370 315 aa13.12□□□□□ -0.31
TARDBP-214ENST00000613177 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
TARDBP-214ENST00000613177 G3V3G9 751 aa13.1□□□□□ -0.31
TARDBP-214ENST00000613177 PKD2Q13563 968 aa13.1□□□□□ -0.31
TARDBP-214ENST00000613177 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
TARDBP-214ENST00000613177 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-214ENST00000613177 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
TARDBP-214ENST00000613177 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-214ENST00000613177 MICALL2Q8IY33 904 aa13.05□□□□□ -0.32
TARDBP-214ENST00000613177 MARVELD3Q96A59 401 aa13.05□□□□□ -0.32
TARDBP-214ENST00000613177 TAOK2Q9UL54 1235 aa13.05□□□□□ -0.32
TARDBP-214ENST00000613177 HOXB3P14651 431 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-214ENST00000613177 RGL2O15211 777 aa13.01□□□□□ -0.33
TARDBP-214ENST00000613177 FBXO22Q8NEZ5 403 aa13.01□□□□□ -0.33
TARDBP-214ENST00000613177 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
TARDBP-214ENST00000613177 STK24Q9Y6E0 443 aa13□□□□□ -0.33
TARDBP-214ENST00000613177 STK25O00506 426 aa12.97□□□□□ -0.33
TARDBP-214ENST00000613177 NLRP6P59044 892 aa12.97□□□□□ -0.33
TARDBP-214ENST00000613177 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
TARDBP-214ENST00000613177 EMP3P54852 163 aa12.95□□□□□ -0.34
TARDBP-214ENST00000613177 POTEB3A0JP26 581 aa12.92□□□□□ -0.34
TARDBP-214ENST00000613177 POTEBQ6S5H4 581 aa12.92□□□□□ -0.34
TARDBP-214ENST00000613177 DOK7Q18PE1 504 aa12.9□□□□□ -0.34
TARDBP-214ENST00000613177 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms