RNA–Protein interactions for RNA: ENST00000611343.1

AC012409.3-201, humanhuman

BASIC

Gene AC012409.3, Length 981 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.3-201ENST00000611343 CCDC61Q9Y6R9 512 aa13.8□□□□□ -0.2
AC012409.3-201ENST00000611343 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
AC012409.3-201ENST00000611343 METRNQ9UJH8 293 aa13.77□□□□□ -0.21
AC012409.3-201ENST00000611343 KIF12Q96FN5 646 aa13.73□□□□□ -0.21
AC012409.3-201ENST00000611343 PLSCR2Q9NRY7 297 aa13.73□□□□□ -0.21
AC012409.3-201ENST00000611343 C7P10643 843 aa13.72□□□□□ -0.21
AC012409.3-201ENST00000611343 SLC39A7Q92504 469 aa13.72□□□□□ -0.21
AC012409.3-201ENST00000611343 ATN1P54259 1190 aaPredicted RBP13.71□□□□□ -0.21
AC012409.3-201ENST00000611343 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
AC012409.3-201ENST00000611343 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
AC012409.3-201ENST00000611343 MIER1Q8N108 512 aa13.67□□□□□ -0.22
AC012409.3-201ENST00000611343 MAP3K13O43283 966 aa13.64□□□□□ -0.23
AC012409.3-201ENST00000611343 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
AC012409.3-201ENST00000611343 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
AC012409.3-201ENST00000611343 POTEMA6NI47 508 aa13.63□□□□□ -0.23
AC012409.3-201ENST00000611343 POTEGQ6S5H5 508 aa13.6□□□□□ -0.23
AC012409.3-201ENST00000611343 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
AC012409.3-201ENST00000611343 TIE1P35590 1138 aa13.54□□□□□ -0.24
AC012409.3-201ENST00000611343 LCE2DQ5TA82 110 aaPredicted RBP13.54□□□□□ -0.24
AC012409.3-201ENST00000611343 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
AC012409.3-201ENST00000611343 TTLL13PA6NNM8 815 aa13.51□□□□□ -0.25
AC012409.3-201ENST00000611343 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
AC012409.3-201ENST00000611343 NUBP1P53384 320 aa13.49□□□□□ -0.25
AC012409.3-201ENST00000611343 COLQQ9Y215 455 aaPredicted RBP13.49□□□□□ -0.25
AC012409.3-201ENST00000611343 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
AC012409.3-201ENST00000611343 FAM163AQ96GL9 167 aaPredicted RBP13.43□□□□□ -0.26
AC012409.3-201ENST00000611343 PCDHB13Q9Y5F0 798 aa13.43□□□□□ -0.26
AC012409.3-201ENST00000611343 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
AC012409.3-201ENST00000611343 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
AC012409.3-201ENST00000611343 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
AC012409.3-201ENST00000611343 SEC24BO95487 1268 aa13.37□□□□□ -0.27
AC012409.3-201ENST00000611343 FKBP8Q14318 412 aa13.36□□□□□ -0.27
AC012409.3-201ENST00000611343 ZBTB47Q9UFB7 747 aaPredicted RBP13.36□□□□□ -0.27
AC012409.3-201ENST00000611343 PCDH10Q9P2E7 1040 aa13.34□□□□□ -0.27
AC012409.3-201ENST00000611343 IER5LQ5T953 404 aa13.33□□□□□ -0.28
AC012409.3-201ENST00000611343 FAM212AQ96EL1 285 aa13.3□□□□□ -0.28
AC012409.3-201ENST00000611343 TMEM106CQ9BVX2 250 aa13.29□□□□□ -0.28
AC012409.3-201ENST00000611343 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
AC012409.3-201ENST00000611343 PYGBP11216 843 aa13.2□□□□□ -0.3
AC012409.3-201ENST00000611343 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
AC012409.3-201ENST00000611343 SLAIN1Q8ND83 568 aa13.19□□□□□ -0.3
AC012409.3-201ENST00000611343 PLCG2P16885 1265 aa13.17□□□□□ -0.3
AC012409.3-201ENST00000611343 PCDHB8Q9UN66 801 aa13.16□□□□□ -0.3
AC012409.3-201ENST00000611343 ST18O60284 1047 aa13.13□□□□□ -0.31
AC012409.3-201ENST00000611343 CDAN1Q8IWY9 1227 aa13.11□□□□□ -0.31
AC012409.3-201ENST00000611343 OCEL1Q9H607 264 aa13.09□□□□□ -0.31
AC012409.3-201ENST00000611343 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
AC012409.3-201ENST00000611343 VASPP50552 380 aaPredicted RBP13□□□□□ -0.33
AC012409.3-201ENST00000611343 PDCD7Q8N8D1 485 aaKnown RBP12.99□□□□□ -0.33
AC012409.3-201ENST00000611343 KLHL34Q8N239 644 aa12.98□□□□□ -0.33
AC012409.3-201ENST00000611343 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.96□□□□□ -0.33
AC012409.3-201ENST00000611343 GSE1Q14687 1217 aa12.95□□□□□ -0.34
AC012409.3-201ENST00000611343 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
AC012409.3-201ENST00000611343 CHRM1P11229 460 aaPredicted RBP12.92□□□□□ -0.34
AC012409.3-201ENST00000611343 TMEM121BQ9BXQ6 578 aaPredicted RBP12.91□□□□□ -0.34
AC012409.3-201ENST00000611343 MARVELD3Q96A59 401 aa12.9□□□□□ -0.34
AC012409.3-201ENST00000611343 PSEN1P49768 467 aa12.88□□□□□ -0.35
AC012409.3-201ENST00000611343 SNPHO15079 494 aa12.87□□□□□ -0.35
AC012409.3-201ENST00000611343 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
AC012409.3-201ENST00000611343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
AC012409.3-201ENST00000611343 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
AC012409.3-201ENST00000611343 ILDR1Q86SU0 546 aaPredicted RBP12.83□□□□□ -0.36
AC012409.3-201ENST00000611343 DPY19L2Q6NUT2 758 aa12.82□□□□□ -0.36
AC012409.3-201ENST00000611343 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
AC012409.3-201ENST00000611343 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
AC012409.3-201ENST00000611343 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
AC012409.3-201ENST00000611343 IFNLR1Q8IU57 520 aaPredicted RBP12.81□□□□□ -0.36
AC012409.3-201ENST00000611343 MMRN1Q13201 1228 aa12.8□□□□□ -0.36
AC012409.3-201ENST00000611343 PDAP1Q13442 181 aaKnown RBP12.78□□□□□ -0.36
AC012409.3-201ENST00000611343 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
AC012409.3-201ENST00000611343 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
AC012409.3-201ENST00000611343 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
AC012409.3-201ENST00000611343 CABP2Q9NPB3 220 aa12.74□□□□□ -0.37
AC012409.3-201ENST00000611343 EMP3P54852 163 aa12.72□□□□□ -0.37
AC012409.3-201ENST00000611343 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
AC012409.3-201ENST00000611343 KRTAP3-3Q9BYR6 98 aa12.69□□□□□ -0.38
AC012409.3-201ENST00000611343 KRTAP3-2Q9BYR7 98 aa12.69□□□□□ -0.38
AC012409.3-201ENST00000611343 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
AC012409.3-201ENST00000611343 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
AC012409.3-201ENST00000611343 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
AC012409.3-201ENST00000611343 HOXB3P14651 431 aaPredicted RBP12.65□□□□□ -0.38
AC012409.3-201ENST00000611343 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
AC012409.3-201ENST00000611343 G3V3G9 751 aa12.55□□□□□ -0.4
AC012409.3-201ENST00000611343 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
AC012409.3-201ENST00000611343 TMEM92Q6UXU6 159 aa12.5□□□□□ -0.41
AC012409.3-201ENST00000611343 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
AC012409.3-201ENST00000611343 RNF25Q96BH1 459 aaPredicted RBP12.47□□□□□ -0.41
AC012409.3-201ENST00000611343 DOK7Q18PE1 504 aa12.46□□□□□ -0.41
AC012409.3-201ENST00000611343 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
AC012409.3-201ENST00000611343 MICALL2Q8IY33 904 aa12.45□□□□□ -0.42
AC012409.3-201ENST00000611343 MS4A4AQ96JQ5 239 aa12.44□□□□□ -0.42
AC012409.3-201ENST00000611343 ERBB3P21860 1342 aa12.43□□□□□ -0.42
AC012409.3-201ENST00000611343 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.4□□□□□ -0.42
AC012409.3-201ENST00000611343 ZFP91Q96JP5 570 aaPredicted RBP12.4□□□□□ -0.42
AC012409.3-201ENST00000611343 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
AC012409.3-201ENST00000611343 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
AC012409.3-201ENST00000611343 SOX12O15370 315 aa12.38□□□□□ -0.43
AC012409.3-201ENST00000611343 PHF8Q9UPP1 1060 aa12.38□□□□□ -0.43
AC012409.3-201ENST00000611343 RIMBP2O15034 1052 aa12.35□□□□□ -0.43
AC012409.3-201ENST00000611343 GPR153Q6NV75 609 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms