RNA–Protein interactions for RNA: ENST00000610493.1

CCL16-204, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CCL16, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-204ENST00000610493 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
CCL16-204ENST00000610493 TRIM41Q8WV44 630 aa15.22■□□□□ 0.03
CCL16-204ENST00000610493 PYGBP11216 843 aa15.17■□□□□ 0.02
CCL16-204ENST00000610493 RNF25Q96BH1 459 aaPredicted RBP15.11■□□□□ 0.01
CCL16-204ENST00000610493 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
CCL16-204ENST00000610493 CHRM1P11229 460 aaPredicted RBP15.04■□□□□ -0
CCL16-204ENST00000610493 CD44P16070 742 aaKnown RBP15.04■□□□□ -0
CCL16-204ENST00000610493 RIOK3O14730 519 aaKnown RBP15.03■□□□□ -0
CCL16-204ENST00000610493 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
CCL16-204ENST00000610493 CHGAP10645 457 aaKnown RBP15.03■□□□□ -0
CCL16-204ENST00000610493 ZRANB1Q9UGI0 708 aa15.01□□□□□ -0.01
CCL16-204ENST00000610493 SLC24A1O60721 1099 aa14.94□□□□□ -0.02
CCL16-204ENST00000610493 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
CCL16-204ENST00000610493 TAOK2Q9UL54 1235 aa14.92□□□□□ -0.02
CCL16-204ENST00000610493 PHF12Q96QT6 1004 aa14.92□□□□□ -0.02
CCL16-204ENST00000610493 PCDHB8Q9UN66 801 aa14.92□□□□□ -0.02
CCL16-204ENST00000610493 PCDHB13Q9Y5F0 798 aa14.92□□□□□ -0.02
CCL16-204ENST00000610493 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
CCL16-204ENST00000610493 BBXQ8WY36 941 aaPredicted RBP14.9□□□□□ -0.02
CCL16-204ENST00000610493 STK25O00506 426 aa14.88□□□□□ -0.03
CCL16-204ENST00000610493 MAP3K13O43283 966 aa14.88□□□□□ -0.03
CCL16-204ENST00000610493 ZNF467Q7Z7K2 595 aaPredicted RBP14.88□□□□□ -0.03
CCL16-204ENST00000610493 HAX1O00165 279 aa14.88□□□□□ -0.03
CCL16-204ENST00000610493 HS6ST3Q8IZP7 471 aa14.88□□□□□ -0.03
CCL16-204ENST00000610493 KIF12Q96FN5 646 aa14.88□□□□□ -0.03
CCL16-204ENST00000610493 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.88□□□□□ -0.03
CCL16-204ENST00000610493 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.87□□□□□ -0.03
CCL16-204ENST00000610493 PLCB2Q00722 1185 aa14.87□□□□□ -0.03
CCL16-204ENST00000610493 ZFP91Q96JP5 570 aaPredicted RBP14.87□□□□□ -0.03
CCL16-204ENST00000610493 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
CCL16-204ENST00000610493 IFNL1Q8IU54 200 aa14.83□□□□□ -0.04
CCL16-204ENST00000610493 STK24Q9Y6E0 443 aa14.83□□□□□ -0.04
CCL16-204ENST00000610493 BCL11BQ9C0K0 894 aaPredicted RBP14.82□□□□□ -0.04
CCL16-204ENST00000610493 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
CCL16-204ENST00000610493 PAXIP1Q6ZW49 1069 aaPredicted RBP14.81□□□□□ -0.04
CCL16-204ENST00000610493 CFAP44Q96MT7 982 aa14.81□□□□□ -0.04
CCL16-204ENST00000610493 PDAP1Q13442 181 aaKnown RBP14.78□□□□□ -0.04
CCL16-204ENST00000610493 SGIP1Q9BQI5 828 aa14.77□□□□□ -0.04
CCL16-204ENST00000610493 PSEN1P49768 467 aa14.76□□□□□ -0.05
CCL16-204ENST00000610493 EVX2Q03828 476 aa14.76□□□□□ -0.05
CCL16-204ENST00000610493 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
CCL16-204ENST00000610493 POTEHQ6S545 545 aa14.73□□□□□ -0.05
CCL16-204ENST00000610493 SPRYD3Q8NCJ5 442 aa14.72□□□□□ -0.05
CCL16-204ENST00000610493 MS4A3Q96HJ5 214 aa14.72□□□□□ -0.05
CCL16-204ENST00000610493 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.05
CCL16-204ENST00000610493 NKX1-1Q15270 411 aaPredicted RBP14.7□□□□□ -0.06
CCL16-204ENST00000610493 DNAJC5Q9H3Z4 198 aa14.66□□□□□ -0.06
CCL16-204ENST00000610493 TRPC6Q9Y210 931 aa14.66□□□□□ -0.06
CCL16-204ENST00000610493 GALR2O43603 387 aaPredicted RBP14.61□□□□□ -0.07
CCL16-204ENST00000610493 CABP2Q9NPB3 220 aa14.61□□□□□ -0.07
CCL16-204ENST00000610493 TMEM106CQ9BVX2 250 aa14.59□□□□□ -0.07
CCL16-204ENST00000610493 GTPBP6O43824 516 aaPredicted RBP14.57□□□□□ -0.08
CCL16-204ENST00000610493 EFCAB3Q8N7B9 438 aa14.55□□□□□ -0.08
CCL16-204ENST00000610493 TSHZ2Q9NRE2 1034 aa14.52□□□□□ -0.08
CCL16-204ENST00000610493 GOLGA2Q08379 1002 aa14.51□□□□□ -0.09
CCL16-204ENST00000610493 TTLL13PA6NNM8 815 aa14.49□□□□□ -0.09
CCL16-204ENST00000610493 TIE1P35590 1138 aa14.49□□□□□ -0.09
CCL16-204ENST00000610493 BMP2KQ9NSY1 1161 aaPredicted RBP14.49□□□□□ -0.09
CCL16-204ENST00000610493 CLCN6P51797 869 aa14.48□□□□□ -0.09
CCL16-204ENST00000610493 MFRPQ9BY79 579 aa14.48□□□□□ -0.09
CCL16-204ENST00000610493 RYDENQ9NUL5 291 aaKnown RBP14.48□□□□□ -0.09
CCL16-204ENST00000610493 SHROOM4Q9ULL8 1493 aa14.47□□□□□ -0.09
CCL16-204ENST00000610493 GABBR2O75899 941 aa14.45□□□□□ -0.1
CCL16-204ENST00000610493 PHF8Q9UPP1 1060 aa14.44□□□□□ -0.1
CCL16-204ENST00000610493 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
CCL16-204ENST00000610493 SOX12O15370 315 aa14.42□□□□□ -0.1
CCL16-204ENST00000610493 MKRN3Q13064 507 aaKnown RBP14.42□□□□□ -0.1
CCL16-204ENST00000610493 TRIM35Q9UPQ4 493 aa14.41□□□□□ -0.1
CCL16-204ENST00000610493 NLRP6P59044 892 aa14.4□□□□□ -0.1
CCL16-204ENST00000610493 VSIG10Q8N0Z9 540 aa14.39□□□□□ -0.11
CCL16-204ENST00000610493 FBXO22Q8NEZ5 403 aa14.37□□□□□ -0.11
CCL16-204ENST00000610493 ATN1P54259 1190 aaPredicted RBP14.37□□□□□ -0.11
CCL16-204ENST00000610493 KDM2AQ9Y2K7 1162 aa14.37□□□□□ -0.11
CCL16-204ENST00000610493 ATMINO43313 823 aaPredicted RBP14.34□□□□□ -0.11
CCL16-204ENST00000610493 PPP1R37O75864 691 aa14.33□□□□□ -0.11
CCL16-204ENST00000610493 DCBLD2Q96PD2 775 aa14.33□□□□□ -0.12
CCL16-204ENST00000610493 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCL16-204ENST00000610493 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
CCL16-204ENST00000610493 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
CCL16-204ENST00000610493 MS4A4AQ96JQ5 239 aa14.3□□□□□ -0.12
CCL16-204ENST00000610493 CADPS2Q86UW7 1296 aa14.23□□□□□ -0.13
CCL16-204ENST00000610493 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
CCL16-204ENST00000610493 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
CCL16-204ENST00000610493 DPY19L2Q6NUT2 758 aa14.19□□□□□ -0.14
CCL16-204ENST00000610493 IRX5P78411 483 aaPredicted RBP14.17□□□□□ -0.14
CCL16-204ENST00000610493 IER5LQ5T953 404 aa14.17□□□□□ -0.14
CCL16-204ENST00000610493 ILDR1Q86SU0 546 aaPredicted RBP14.17□□□□□ -0.14
CCL16-204ENST00000610493 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
CCL16-204ENST00000610493 PDCD7Q8N8D1 485 aaKnown RBP14.15□□□□□ -0.14
CCL16-204ENST00000610493 PLCG2P16885 1265 aa14.15□□□□□ -0.14
CCL16-204ENST00000610493 OCEL1Q9H607 264 aa14.15□□□□□ -0.14
CCL16-204ENST00000610493 SEC24BO95487 1268 aa14.14□□□□□ -0.15
CCL16-204ENST00000610493 SLC39A7Q92504 469 aa14.1□□□□□ -0.15
CCL16-204ENST00000610493 COLQQ9Y215 455 aaPredicted RBP14.09□□□□□ -0.15
CCL16-204ENST00000610493 MYO15BQ96JP2 1530 aa14.09□□□□□ -0.15
CCL16-204ENST00000610493 METRNQ9UJH8 293 aa14.08□□□□□ -0.16
CCL16-204ENST00000610493 WDR70Q9NW82 654 aa14.07□□□□□ -0.16
CCL16-204ENST00000610493 C7P10643 843 aa14.05□□□□□ -0.16
CCL16-204ENST00000610493 MICALL2Q8IY33 904 aa14.04□□□□□ -0.16
CCL16-204ENST00000610493 G3V3G9 751 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms