RNA–Protein interactions for RNA: ENST00000607664.1

GTF2H1-216, Transcript of general transcription factor IIH subunit 1, humanhuman

Gene GTF2H1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-216ENST00000607664 MS4A3Q96HJ5 214 aa11.67□□□□□ -0.54
GTF2H1-216ENST00000607664 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
GTF2H1-216ENST00000607664 ASTLQ6HA08 431 aaPredicted RBP11.61□□□□□ -0.55
GTF2H1-216ENST00000607664 KIF12Q96FN5 646 aa11.61□□□□□ -0.55
GTF2H1-216ENST00000607664 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
GTF2H1-216ENST00000607664 ATMINO43313 823 aaPredicted RBP11.57□□□□□ -0.56
GTF2H1-216ENST00000607664 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
GTF2H1-216ENST00000607664 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
GTF2H1-216ENST00000607664 MAP3K13O43283 966 aa11.54□□□□□ -0.56
GTF2H1-216ENST00000607664 C7P10643 843 aa11.54□□□□□ -0.56
GTF2H1-216ENST00000607664 NUBP1P53384 320 aa11.53□□□□□ -0.56
GTF2H1-216ENST00000607664 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
GTF2H1-216ENST00000607664 FAM212AQ96EL1 285 aa11.51□□□□□ -0.57
GTF2H1-216ENST00000607664 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
GTF2H1-216ENST00000607664 TIE1P35590 1138 aa11.49□□□□□ -0.57
GTF2H1-216ENST00000607664 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
GTF2H1-216ENST00000607664 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
GTF2H1-216ENST00000607664 BMP2KQ9NSY1 1161 aaPredicted RBP11.46□□□□□ -0.57
GTF2H1-216ENST00000607664 OTUD5Q96G74 571 aa11.45□□□□□ -0.58
GTF2H1-216ENST00000607664 PCDHB13Q9Y5F0 798 aa11.45□□□□□ -0.58
GTF2H1-216ENST00000607664 TRPC6Q9Y210 931 aa11.44□□□□□ -0.58
GTF2H1-216ENST00000607664 MAMSTRQ6ZN01 415 aa11.4□□□□□ -0.58
GTF2H1-216ENST00000607664 TTLL13PA6NNM8 815 aa11.39□□□□□ -0.59
GTF2H1-216ENST00000607664 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
GTF2H1-216ENST00000607664 DCAF8Q5TAQ9 597 aa11.39□□□□□ -0.59
GTF2H1-216ENST00000607664 IFNL1Q8IU54 200 aa11.36□□□□□ -0.59
GTF2H1-216ENST00000607664 KLHL34Q8N239 644 aa11.36□□□□□ -0.59
GTF2H1-216ENST00000607664 IER5LQ5T953 404 aa11.33□□□□□ -0.6
GTF2H1-216ENST00000607664 SEC24BO95487 1268 aa11.32□□□□□ -0.6
GTF2H1-216ENST00000607664 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
GTF2H1-216ENST00000607664 SCUBE2Q9NQ36 999 aa11.32□□□□□ -0.6
GTF2H1-216ENST00000607664 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
GTF2H1-216ENST00000607664 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
GTF2H1-216ENST00000607664 PYGBP11216 843 aa11.3□□□□□ -0.6
GTF2H1-216ENST00000607664 GSE1Q14687 1217 aa11.3□□□□□ -0.6
GTF2H1-216ENST00000607664 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
GTF2H1-216ENST00000607664 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
GTF2H1-216ENST00000607664 ZNF467Q7Z7K2 595 aaPredicted RBP11.2□□□□□ -0.62
GTF2H1-216ENST00000607664 PCDHB8Q9UN66 801 aa11.2□□□□□ -0.62
GTF2H1-216ENST00000607664 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
GTF2H1-216ENST00000607664 PLCG2P16885 1265 aa11.18□□□□□ -0.62
GTF2H1-216ENST00000607664 SPOCK2Q92563 424 aa11.18□□□□□ -0.62
GTF2H1-216ENST00000607664 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
GTF2H1-216ENST00000607664 POTEMA6NI47 508 aa11.15□□□□□ -0.62
GTF2H1-216ENST00000607664 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
GTF2H1-216ENST00000607664 OCEL1Q9H607 264 aa11.13□□□□□ -0.63
GTF2H1-216ENST00000607664 POTEGQ6S5H5 508 aa11.12□□□□□ -0.63
GTF2H1-216ENST00000607664 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
GTF2H1-216ENST00000607664 CIZ1Q9ULV3 898 aaPredicted RBP11.1□□□□□ -0.63
GTF2H1-216ENST00000607664 FAM163AQ96GL9 167 aaPredicted RBP11.09□□□□□ -0.63
GTF2H1-216ENST00000607664 PSEN1P49768 467 aa11.06□□□□□ -0.64
GTF2H1-216ENST00000607664 MKRN3Q13064 507 aaKnown RBP11.06□□□□□ -0.64
GTF2H1-216ENST00000607664 SLAIN1Q8ND83 568 aa11.06□□□□□ -0.64
GTF2H1-216ENST00000607664 PCDH10Q9P2E7 1040 aa11.06□□□□□ -0.64
GTF2H1-216ENST00000607664 PDAP1Q13442 181 aaKnown RBP11.04□□□□□ -0.64
GTF2H1-216ENST00000607664 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
GTF2H1-216ENST00000607664 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
GTF2H1-216ENST00000607664 TRIM41Q8WV44 630 aa11.02□□□□□ -0.65
GTF2H1-216ENST00000607664 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
GTF2H1-216ENST00000607664 PDCD7Q8N8D1 485 aaKnown RBP10.98□□□□□ -0.65
GTF2H1-216ENST00000607664 L3MBTL3Q96JM7 780 aaPredicted RBP10.98□□□□□ -0.65
GTF2H1-216ENST00000607664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■■■□ 22.2
GTF2H1-216ENST00000607664 SNPHO15079 494 aa10.93□□□□□ -0.66
GTF2H1-216ENST00000607664 C3orf67Q6ZVT6 689 aa10.93□□□□□ -0.66
GTF2H1-216ENST00000607664 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
GTF2H1-216ENST00000607664 ILDR1Q86SU0 546 aaPredicted RBP10.91□□□□□ -0.66
GTF2H1-216ENST00000607664 ST18O60284 1047 aa10.89□□□□□ -0.67
GTF2H1-216ENST00000607664 TMEM121BQ9BXQ6 578 aaPredicted RBP10.86□□□□□ -0.67
GTF2H1-216ENST00000607664 G3V3G9 751 aa10.85□□□□□ -0.67
GTF2H1-216ENST00000607664 RIOK3O14730 519 aaKnown RBP10.82□□□□□ -0.68
GTF2H1-216ENST00000607664 DPY19L2Q6NUT2 758 aa10.81□□□□□ -0.68
GTF2H1-216ENST00000607664 CDAN1Q8IWY9 1227 aa10.81□□□□□ -0.68
GTF2H1-216ENST00000607664 BOLA1Q9Y3E2 137 aa10.81□□□□□ -0.68
GTF2H1-216ENST00000607664 VGFO15240 615 aaPredicted RBP10.78□□□□□ -0.68
GTF2H1-216ENST00000607664 EFCAB3Q8N7B9 438 aa10.78□□□□□ -0.68
GTF2H1-216ENST00000607664 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
GTF2H1-216ENST00000607664 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
GTF2H1-216ENST00000607664 SOX12O15370 315 aa10.74□□□□□ -0.69
GTF2H1-216ENST00000607664 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
GTF2H1-216ENST00000607664 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
GTF2H1-216ENST00000607664 MARVELD3Q96A59 401 aa10.7□□□□□ -0.7
GTF2H1-216ENST00000607664 EMP3P54852 163 aa10.67□□□□□ -0.7
GTF2H1-216ENST00000607664 MICALL2Q8IY33 904 aa10.64□□□□□ -0.71
GTF2H1-216ENST00000607664 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
GTF2H1-216ENST00000607664 DOK7Q18PE1 504 aa10.63□□□□□ -0.71
GTF2H1-216ENST00000607664 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
GTF2H1-216ENST00000607664 ZNF710Q8N1W2 664 aa10.62□□□□□ -0.71
GTF2H1-216ENST00000607664 BCL11BQ9C0K0 894 aaPredicted RBP10.62□□□□□ -0.71
GTF2H1-216ENST00000607664 HOXB3P14651 431 aaPredicted RBP10.61□□□□□ -0.71
GTF2H1-216ENST00000607664 NLRP6P59044 892 aa10.61□□□□□ -0.71
GTF2H1-216ENST00000607664 MS4A4AQ96JQ5 239 aa10.61□□□□□ -0.71
GTF2H1-216ENST00000607664 STK24Q9Y6E0 443 aa10.6□□□□□ -0.71
GTF2H1-216ENST00000607664 RIMBP2O15034 1052 aa10.59□□□□□ -0.71
GTF2H1-216ENST00000607664 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
GTF2H1-216ENST00000607664 HS3ST6Q96QI5 342 aa10.58□□□□□ -0.72
GTF2H1-216ENST00000607664 STK25O00506 426 aa10.57□□□□□ -0.72
GTF2H1-216ENST00000607664 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
GTF2H1-216ENST00000607664 PKD2Q13563 968 aa10.54□□□□□ -0.72
GTF2H1-216ENST00000607664 TMEM92Q6UXU6 159 aa10.54□□□□□ -0.72
GTF2H1-216ENST00000607664 FBXO22Q8NEZ5 403 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms