RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 ATMINO43313 823 aaPredicted RBP15.41■□□□□ 0.06
CTSS-206ENST00000607427 SLC39A7Q92504 469 aa15.39■□□□□ 0.05
CTSS-206ENST00000607427 C7P10643 843 aa15.37■□□□□ 0.05
CTSS-206ENST00000607427 TSPYL2Q9H2G4 693 aaPredicted RBP15.37■□□□□ 0.05
CTSS-206ENST00000607427 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
CTSS-206ENST00000607427 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
CTSS-206ENST00000607427 POTEMA6NI47 508 aa15.29■□□□□ 0.04
CTSS-206ENST00000607427 KIF12Q96FN5 646 aa15.28■□□□□ 0.04
CTSS-206ENST00000607427 ATN1P54259 1190 aaPredicted RBP15.26■□□□□ 0.03
CTSS-206ENST00000607427 POTEGQ6S5H5 508 aa15.25■□□□□ 0.03
CTSS-206ENST00000607427 MAMSTRQ6ZN01 415 aa15.25■□□□□ 0.03
CTSS-206ENST00000607427 PLEKHG5O94827 1062 aa15.21■□□□□ 0.03
CTSS-206ENST00000607427 BMP2KQ9NSY1 1161 aaPredicted RBP15.2■□□□□ 0.02
CTSS-206ENST00000607427 RASEFQ8IZ41 740 aa15.18■□□□□ 0.02
CTSS-206ENST00000607427 MIER1Q8N108 512 aa15.18■□□□□ 0.02
CTSS-206ENST00000607427 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
CTSS-206ENST00000607427 MAP3K13O43283 966 aa15.16■□□□□ 0.02
CTSS-206ENST00000607427 SCUBE2Q9NQ36 999 aa15.14■□□□□ 0.01
CTSS-206ENST00000607427 TIE1P35590 1138 aa15.13■□□□□ 0.01
CTSS-206ENST00000607427 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
CTSS-206ENST00000607427 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
CTSS-206ENST00000607427 LCE2DQ5TA82 110 aaPredicted RBP15.07■□□□□ 0
CTSS-206ENST00000607427 TTLL13PA6NNM8 815 aa15.04■□□□□ -0
CTSS-206ENST00000607427 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
CTSS-206ENST00000607427 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
CTSS-206ENST00000607427 SGIP1Q9BQI5 828 aa15□□□□□ -0.01
CTSS-206ENST00000607427 COLQQ9Y215 455 aaPredicted RBP15□□□□□ -0.01
CTSS-206ENST00000607427 SEC24BO95487 1268 aa14.97□□□□□ -0.01
CTSS-206ENST00000607427 ZBTB47Q9UFB7 747 aaPredicted RBP14.97□□□□□ -0.01
CTSS-206ENST00000607427 PCDHB13Q9Y5F0 798 aa14.97□□□□□ -0.01
CTSS-206ENST00000607427 NUBP1P53384 320 aa14.95□□□□□ -0.02
CTSS-206ENST00000607427 IER5LQ5T953 404 aa14.95□□□□□ -0.02
CTSS-206ENST00000607427 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
CTSS-206ENST00000607427 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
CTSS-206ENST00000607427 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
CTSS-206ENST00000607427 TMEM106CQ9BVX2 250 aa14.82□□□□□ -0.04
CTSS-206ENST00000607427 PLCG2P16885 1265 aa14.75□□□□□ -0.05
CTSS-206ENST00000607427 FKBP8Q14318 412 aa14.74□□□□□ -0.05
CTSS-206ENST00000607427 SLAIN1Q8ND83 568 aa14.74□□□□□ -0.05
CTSS-206ENST00000607427 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
CTSS-206ENST00000607427 CDAN1Q8IWY9 1227 aa14.69□□□□□ -0.06
CTSS-206ENST00000607427 ST18O60284 1047 aa14.66□□□□□ -0.06
CTSS-206ENST00000607427 PYGBP11216 843 aa14.64□□□□□ -0.07
CTSS-206ENST00000607427 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
CTSS-206ENST00000607427 OCEL1Q9H607 264 aa14.63□□□□□ -0.07
CTSS-206ENST00000607427 PCDHB8Q9UN66 801 aa14.59□□□□□ -0.07
CTSS-206ENST00000607427 FBXO3Q9UK99 471 aa14.57□□□□□ -0.08
CTSS-206ENST00000607427 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.52□□□□□ -0.09
CTSS-206ENST00000607427 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
CTSS-206ENST00000607427 SNPHO15079 494 aa14.49□□□□□ -0.09
CTSS-206ENST00000607427 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.09
CTSS-206ENST00000607427 PDCD7Q8N8D1 485 aaKnown RBP14.46□□□□□ -0.09
CTSS-206ENST00000607427 GSE1Q14687 1217 aa14.45□□□□□ -0.1
CTSS-206ENST00000607427 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
CTSS-206ENST00000607427 KLHL34Q8N239 644 aa14.41□□□□□ -0.1
CTSS-206ENST00000607427 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
CTSS-206ENST00000607427 MKRN3Q13064 507 aaKnown RBP14.39□□□□□ -0.11
CTSS-206ENST00000607427 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
CTSS-206ENST00000607427 C3orf67Q6ZVT6 689 aa14.38□□□□□ -0.11
CTSS-206ENST00000607427 MARVELD3Q96A59 401 aa14.38□□□□□ -0.11
CTSS-206ENST00000607427 L3MBTL3Q96JM7 780 aaPredicted RBP14.36□□□□□ -0.11
CTSS-206ENST00000607427 SPNS2Q8IVW8 549 aa14.35□□□□□ -0.11
CTSS-206ENST00000607427 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
CTSS-206ENST00000607427 PSEN1P49768 467 aa14.33□□□□□ -0.12
CTSS-206ENST00000607427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.12
CTSS-206ENST00000607427 EMP3P54852 163 aa14.27□□□□□ -0.13
CTSS-206ENST00000607427 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.13
CTSS-206ENST00000607427 PDAP1Q13442 181 aaKnown RBP14.25□□□□□ -0.13
CTSS-206ENST00000607427 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
CTSS-206ENST00000607427 HS3ST6Q96QI5 342 aa14.17□□□□□ -0.14
CTSS-206ENST00000607427 POTEB3A0JP26 581 aa14.16□□□□□ -0.14
CTSS-206ENST00000607427 POTEBQ6S5H4 581 aa14.16□□□□□ -0.14
CTSS-206ENST00000607427 CABP2Q9NPB3 220 aa14.15□□□□□ -0.14
CTSS-206ENST00000607427 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
CTSS-206ENST00000607427 KRTAP3-3Q9BYR6 98 aa14.14□□□□□ -0.15
CTSS-206ENST00000607427 KRTAP3-2Q9BYR7 98 aa14.14□□□□□ -0.15
CTSS-206ENST00000607427 FAM205CA6NFA0 338 aa14.13□□□□□ -0.15
CTSS-206ENST00000607427 BOLA1Q9Y3E2 137 aa14.13□□□□□ -0.15
CTSS-206ENST00000607427 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
CTSS-206ENST00000607427 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
CTSS-206ENST00000607427 G3V3G9 751 aa14.1□□□□□ -0.15
CTSS-206ENST00000607427 HOXB3P14651 431 aaPredicted RBP14.08□□□□□ -0.16
CTSS-206ENST00000607427 HOXB1P14653 301 aaPredicted RBP13.99□□□□□ -0.17
CTSS-206ENST00000607427 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
CTSS-206ENST00000607427 DOK7Q18PE1 504 aa13.97□□□□□ -0.17
CTSS-206ENST00000607427 EFCAB3Q8N7B9 438 aa13.94□□□□□ -0.18
CTSS-206ENST00000607427 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
CTSS-206ENST00000607427 ERBB3P21860 1342 aa13.9□□□□□ -0.18
CTSS-206ENST00000607427 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
CTSS-206ENST00000607427 MICALL2Q8IY33 904 aa13.87□□□□□ -0.19
CTSS-206ENST00000607427 TMEM92Q6UXU6 159 aa13.84□□□□□ -0.19
CTSS-206ENST00000607427 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
CTSS-206ENST00000607427 ZSWIM6Q9HCJ5 1215 aa13.82□□□□□ -0.2
CTSS-206ENST00000607427 SOX12O15370 315 aa13.79□□□□□ -0.2
CTSS-206ENST00000607427 RIOK3O14730 519 aaKnown RBP13.78□□□□□ -0.2
CTSS-206ENST00000607427 MS4A4AQ96JQ5 239 aa13.78□□□□□ -0.2
CTSS-206ENST00000607427 RNF166Q96A37 237 aaPredicted RBP13.77□□□□□ -0.21
CTSS-206ENST00000607427 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
CTSS-206ENST00000607427 GPR153Q6NV75 609 aa13.75□□□□□ -0.21
CTSS-206ENST00000607427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms