RNA–Protein interactions for RNA: ENST00000607150.1

PKNOX1-211, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 4

Gene PKNOX1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-211ENST00000607150 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
PKNOX1-211ENST00000607150 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
PKNOX1-211ENST00000607150 FAM212AQ96EL1 285 aa13.1□□□□□ -0.31
PKNOX1-211ENST00000607150 CLCN6P51797 869 aa13.08□□□□□ -0.32
PKNOX1-211ENST00000607150 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
PKNOX1-211ENST00000607150 MS4A3Q96HJ5 214 aa13.08□□□□□ -0.32
PKNOX1-211ENST00000607150 POTEIP0CG38 1075 aa13.07□□□□□ -0.32
PKNOX1-211ENST00000607150 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
PKNOX1-211ENST00000607150 MAP3K13O43283 966 aa13.04□□□□□ -0.32
PKNOX1-211ENST00000607150 SPOCK2Q92563 424 aa13.04□□□□□ -0.32
PKNOX1-211ENST00000607150 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
PKNOX1-211ENST00000607150 PYGBP11216 843 aa12.99□□□□□ -0.33
PKNOX1-211ENST00000607150 TRPC6Q9Y210 931 aa12.97□□□□□ -0.33
PKNOX1-211ENST00000607150 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
PKNOX1-211ENST00000607150 GSE1Q14687 1217 aa12.94□□□□□ -0.34
PKNOX1-211ENST00000607150 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
PKNOX1-211ENST00000607150 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
PKNOX1-211ENST00000607150 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
PKNOX1-211ENST00000607150 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
PKNOX1-211ENST00000607150 SGIP1Q9BQI5 828 aa12.86□□□□□ -0.35
PKNOX1-211ENST00000607150 PCDHB8Q9UN66 801 aa12.86□□□□□ -0.35
PKNOX1-211ENST00000607150 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
PKNOX1-211ENST00000607150 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
PKNOX1-211ENST00000607150 ATN1P54259 1190 aaPredicted RBP12.83□□□□□ -0.36
PKNOX1-211ENST00000607150 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
PKNOX1-211ENST00000607150 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
PKNOX1-211ENST00000607150 TIE1P35590 1138 aa12.79□□□□□ -0.36
PKNOX1-211ENST00000607150 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
PKNOX1-211ENST00000607150 LHX8Q68G74 356 aa12.72□□□□□ -0.37
PKNOX1-211ENST00000607150 ZNF467Q7Z7K2 595 aaPredicted RBP12.72□□□□□ -0.37
PKNOX1-211ENST00000607150 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
PKNOX1-211ENST00000607150 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
PKNOX1-211ENST00000607150 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
PKNOX1-211ENST00000607150 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
PKNOX1-211ENST00000607150 C7P10643 843 aa12.66□□□□□ -0.38
PKNOX1-211ENST00000607150 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
PKNOX1-211ENST00000607150 RNF25Q96BH1 459 aaPredicted RBP12.65□□□□□ -0.38
PKNOX1-211ENST00000607150 PSEN1P49768 467 aa12.64□□□□□ -0.39
PKNOX1-211ENST00000607150 PKD2Q13563 968 aa12.64□□□□□ -0.39
PKNOX1-211ENST00000607150 POTEFA5A3E0 1075 aa12.63□□□□□ -0.39
PKNOX1-211ENST00000607150 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
PKNOX1-211ENST00000607150 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
PKNOX1-211ENST00000607150 ECM2O94769 699 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-211ENST00000607150 RIOK3O14730 519 aaKnown RBP12.56□□□□□ -0.4
PKNOX1-211ENST00000607150 SEC24BO95487 1268 aa12.56□□□□□ -0.4
PKNOX1-211ENST00000607150 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
PKNOX1-211ENST00000607150 IER5LQ5T953 404 aa12.54□□□□□ -0.4
PKNOX1-211ENST00000607150 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
PKNOX1-211ENST00000607150 RGL2O15211 777 aa12.51□□□□□ -0.41
PKNOX1-211ENST00000607150 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
PKNOX1-211ENST00000607150 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
PKNOX1-211ENST00000607150 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
PKNOX1-211ENST00000607150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
PKNOX1-211ENST00000607150 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
PKNOX1-211ENST00000607150 PLCG2P16885 1265 aa12.48□□□□□ -0.41
PKNOX1-211ENST00000607150 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
PKNOX1-211ENST00000607150 VGFO15240 615 aaPredicted RBP12.47□□□□□ -0.41
PKNOX1-211ENST00000607150 OCEL1Q9H607 264 aa12.44□□□□□ -0.42
PKNOX1-211ENST00000607150 EFCAB3Q8N7B9 438 aa12.42□□□□□ -0.42
PKNOX1-211ENST00000607150 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
PKNOX1-211ENST00000607150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
PKNOX1-211ENST00000607150 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
PKNOX1-211ENST00000607150 DPY19L2Q6NUT2 758 aa12.36□□□□□ -0.43
PKNOX1-211ENST00000607150 STK24Q9Y6E0 443 aa12.36□□□□□ -0.43
PKNOX1-211ENST00000607150 STK25O00506 426 aa12.35□□□□□ -0.43
PKNOX1-211ENST00000607150 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
PKNOX1-211ENST00000607150 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
PKNOX1-211ENST00000607150 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
PKNOX1-211ENST00000607150 TAOK2Q9UL54 1235 aa12.33□□□□□ -0.44
PKNOX1-211ENST00000607150 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
PKNOX1-211ENST00000607150 SOX12O15370 315 aa12.25□□□□□ -0.45
PKNOX1-211ENST00000607150 MS4A4AQ96JQ5 239 aa12.25□□□□□ -0.45
PKNOX1-211ENST00000607150 SLAIN1Q8ND83 568 aa12.23□□□□□ -0.45
PKNOX1-211ENST00000607150 L3MBTL3Q96JM7 780 aaPredicted RBP12.23□□□□□ -0.45
PKNOX1-211ENST00000607150 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
PKNOX1-211ENST00000607150 MFRPQ9BY79 579 aa12.21□□□□□ -0.45
PKNOX1-211ENST00000607150 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
PKNOX1-211ENST00000607150 FBXO22Q8NEZ5 403 aa12.19□□□□□ -0.46
PKNOX1-211ENST00000607150 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
PKNOX1-211ENST00000607150 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
PKNOX1-211ENST00000607150 HS6ST3Q8IZP7 471 aa12.18□□□□□ -0.46
PKNOX1-211ENST00000607150 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
PKNOX1-211ENST00000607150 NLRP6P59044 892 aa12.17□□□□□ -0.46
PKNOX1-211ENST00000607150 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
PKNOX1-211ENST00000607150 G3V3G9 751 aa12.14□□□□□ -0.47
PKNOX1-211ENST00000607150 MICALL2Q8IY33 904 aa12.12□□□□□ -0.47
PKNOX1-211ENST00000607150 TMEM121BQ9BXQ6 578 aaPredicted RBP12.12□□□□□ -0.47
PKNOX1-211ENST00000607150 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
PKNOX1-211ENST00000607150 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-211ENST00000607150 AMER1Q5JTC6 1135 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-211ENST00000607150 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
PKNOX1-211ENST00000607150 PPP1R37O75864 691 aa12.07□□□□□ -0.48
PKNOX1-211ENST00000607150 TMEM92Q6UXU6 159 aa12.05□□□□□ -0.48
PKNOX1-211ENST00000607150 DNAJC5Q9H3Z4 198 aa12□□□□□ -0.49
PKNOX1-211ENST00000607150 ST18O60284 1047 aa11.98□□□□□ -0.49
PKNOX1-211ENST00000607150 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
PKNOX1-211ENST00000607150 POTEMA6NI47 508 aa11.95□□□□□ -0.5
PKNOX1-211ENST00000607150 SNPHO15079 494 aa11.93□□□□□ -0.5
PKNOX1-211ENST00000607150 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
PKNOX1-211ENST00000607150 GTPBP6O43824 516 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms