RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
LINC00397-202ENST00000606785 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
LINC00397-202ENST00000606785 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00397-202ENST00000606785 POTEMA6NI47 508 aa11.71□□□□□ -0.53
LINC00397-202ENST00000606785 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
LINC00397-202ENST00000606785 PKD2Q13563 968 aa11.67□□□□□ -0.54
LINC00397-202ENST00000606785 POTEGQ6S5H5 508 aa11.66□□□□□ -0.54
LINC00397-202ENST00000606785 PELP1Q8IZL8 1130 aaKnown RBP11.66□□□□□ -0.54
LINC00397-202ENST00000606785 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
LINC00397-202ENST00000606785 ASTLQ6HA08 431 aaPredicted RBP11.64□□□□□ -0.55
LINC00397-202ENST00000606785 HAP1P54257 671 aaPredicted RBP11.61□□□□□ -0.55
LINC00397-202ENST00000606785 SLC39A7Q92504 469 aa11.61□□□□□ -0.55
LINC00397-202ENST00000606785 PCDH10Q9P2E7 1040 aa11.61□□□□□ -0.55
LINC00397-202ENST00000606785 METRNQ9UJH8 293 aa11.61□□□□□ -0.55
LINC00397-202ENST00000606785 C7P10643 843 aa11.59□□□□□ -0.55
LINC00397-202ENST00000606785 ATMINO43313 823 aaPredicted RBP11.58□□□□□ -0.56
LINC00397-202ENST00000606785 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
LINC00397-202ENST00000606785 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
LINC00397-202ENST00000606785 SPOCK2Q92563 424 aa11.55□□□□□ -0.56
LINC00397-202ENST00000606785 KLHL34Q8N239 644 aa11.54□□□□□ -0.56
LINC00397-202ENST00000606785 POTEJP0CG39 1038 aa11.52□□□□□ -0.57
LINC00397-202ENST00000606785 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
LINC00397-202ENST00000606785 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
LINC00397-202ENST00000606785 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.57
LINC00397-202ENST00000606785 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
LINC00397-202ENST00000606785 BBXQ8WY36 941 aaPredicted RBP11.44□□□□□ -0.58
LINC00397-202ENST00000606785 BCANQ96GW7 911 aa11.44□□□□□ -0.58
LINC00397-202ENST00000606785 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
LINC00397-202ENST00000606785 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
LINC00397-202ENST00000606785 ATN1P54259 1190 aaPredicted RBP11.43□□□□□ -0.58
LINC00397-202ENST00000606785 LCE2DQ5TA82 110 aaPredicted RBP11.43□□□□□ -0.58
LINC00397-202ENST00000606785 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
LINC00397-202ENST00000606785 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
LINC00397-202ENST00000606785 MIER1Q8N108 512 aa11.38□□□□□ -0.59
LINC00397-202ENST00000606785 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
LINC00397-202ENST00000606785 BMP2KQ9NSY1 1161 aaPredicted RBP11.36□□□□□ -0.59
LINC00397-202ENST00000606785 POTEFA5A3E0 1075 aa11.34□□□□□ -0.59
LINC00397-202ENST00000606785 RGL2O15211 777 aa11.34□□□□□ -0.59
LINC00397-202ENST00000606785 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
LINC00397-202ENST00000606785 TIE1P35590 1138 aa11.33□□□□□ -0.6
LINC00397-202ENST00000606785 CFAP44Q96MT7 982 aa11.3□□□□□ -0.6
LINC00397-202ENST00000606785 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
LINC00397-202ENST00000606785 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
LINC00397-202ENST00000606785 MAP3K13O43283 966 aa11.28□□□□□ -0.6
LINC00397-202ENST00000606785 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
LINC00397-202ENST00000606785 PLEKHG5O94827 1062 aa11.27□□□□□ -0.61
LINC00397-202ENST00000606785 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
LINC00397-202ENST00000606785 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
LINC00397-202ENST00000606785 CIZ1Q9ULV3 898 aaPredicted RBP11.25□□□□□ -0.61
LINC00397-202ENST00000606785 TTLL13PA6NNM8 815 aa11.23□□□□□ -0.61
LINC00397-202ENST00000606785 SEC24BO95487 1268 aa11.23□□□□□ -0.61
LINC00397-202ENST00000606785 RASEFQ8IZ41 740 aa11.22□□□□□ -0.61
LINC00397-202ENST00000606785 COLQQ9Y215 455 aaPredicted RBP11.22□□□□□ -0.61
LINC00397-202ENST00000606785 PRKCSHP14314 528 aaPredicted RBP11.21□□□□□ -0.61
LINC00397-202ENST00000606785 IER5LQ5T953 404 aa11.21□□□□□ -0.61
LINC00397-202ENST00000606785 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
LINC00397-202ENST00000606785 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
LINC00397-202ENST00000606785 CDAN1Q8IWY9 1227 aa11.19□□□□□ -0.62
LINC00397-202ENST00000606785 SGIP1Q9BQI5 828 aa11.19□□□□□ -0.62
LINC00397-202ENST00000606785 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
LINC00397-202ENST00000606785 TRIM35Q9UPQ4 493 aa11.15□□□□□ -0.62
LINC00397-202ENST00000606785 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
LINC00397-202ENST00000606785 HS6ST3Q8IZP7 471 aa11.1□□□□□ -0.63
LINC00397-202ENST00000606785 GSE1Q14687 1217 aa11.09□□□□□ -0.63
LINC00397-202ENST00000606785 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
LINC00397-202ENST00000606785 ST18O60284 1047 aa11.08□□□□□ -0.64
LINC00397-202ENST00000606785 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
LINC00397-202ENST00000606785 DNAJC5Q9H3Z4 198 aa11.05□□□□□ -0.64
LINC00397-202ENST00000606785 PLCG2P16885 1265 aa11.03□□□□□ -0.64
LINC00397-202ENST00000606785 NUBP1P53384 320 aa11.03□□□□□ -0.64
LINC00397-202ENST00000606785 IFNL1Q8IU54 200 aa11.03□□□□□ -0.64
LINC00397-202ENST00000606785 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
LINC00397-202ENST00000606785 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
LINC00397-202ENST00000606785 IRX5P78411 483 aaPredicted RBP10.99□□□□□ -0.65
LINC00397-202ENST00000606785 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
LINC00397-202ENST00000606785 FAM212AQ96EL1 285 aa10.98□□□□□ -0.65
LINC00397-202ENST00000606785 RIOK3O14730 519 aaKnown RBP10.97□□□□□ -0.65
LINC00397-202ENST00000606785 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
LINC00397-202ENST00000606785 SNPHO15079 494 aa10.94□□□□□ -0.66
LINC00397-202ENST00000606785 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
LINC00397-202ENST00000606785 NBR1Q14596 966 aa10.94□□□□□ -0.66
LINC00397-202ENST00000606785 NKX1-1Q15270 411 aaPredicted RBP10.93□□□□□ -0.66
LINC00397-202ENST00000606785 OCEL1Q9H607 264 aa10.93□□□□□ -0.66
LINC00397-202ENST00000606785 SPNS2Q8IVW8 549 aa10.92□□□□□ -0.66
LINC00397-202ENST00000606785 VGFO15240 615 aaPredicted RBP10.89□□□□□ -0.67
LINC00397-202ENST00000606785 GTPBP6O43824 516 aaPredicted RBP10.89□□□□□ -0.67
LINC00397-202ENST00000606785 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.89□□□□□ -0.67
LINC00397-202ENST00000606785 STK25O00506 426 aa10.88□□□□□ -0.67
LINC00397-202ENST00000606785 CHRM1P11229 460 aaPredicted RBP10.88□□□□□ -0.67
LINC00397-202ENST00000606785 MARVELD3Q96A59 401 aa10.82□□□□□ -0.68
LINC00397-202ENST00000606785 RYDENQ9NUL5 291 aaKnown RBP10.79□□□□□ -0.68
LINC00397-202ENST00000606785 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.78□□□□□ -0.68
LINC00397-202ENST00000606785 PYGBP11216 843 aa10.78□□□□□ -0.68
LINC00397-202ENST00000606785 ZFP91Q96JP5 570 aaPredicted RBP10.78□□□□□ -0.68
LINC00397-202ENST00000606785 BCL11BQ9C0K0 894 aaPredicted RBP10.78□□□□□ -0.68
LINC00397-202ENST00000606785 STK24Q9Y6E0 443 aa10.78□□□□□ -0.68
LINC00397-202ENST00000606785 PDCD7Q8N8D1 485 aaKnown RBP10.76□□□□□ -0.69
LINC00397-202ENST00000606785 EMP3P54852 163 aa10.75□□□□□ -0.69
LINC00397-202ENST00000606785 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
LINC00397-202ENST00000606785 PCDHB8Q9UN66 801 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms