RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 CCDC61Q9Y6R9 512 aa4.45□□□□□ -1.7
SNORA28-201ENST00000606769 FAM212AQ96EL1 285 aa4.44□□□□□ -1.7
SNORA28-201ENST00000606769 PYGBP11216 843 aa4.43□□□□□ -1.7
SNORA28-201ENST00000606769 TSPYL2Q9H2G4 693 aaPredicted RBP4.43□□□□□ -1.7
SNORA28-201ENST00000606769 C19orf67A6NJJ6 358 aa4.42□□□□□ -1.7
SNORA28-201ENST00000606769 EVX2Q03828 476 aa4.42□□□□□ -1.7
SNORA28-201ENST00000606769 TRIM41Q8WV44 630 aa4.42□□□□□ -1.7
SNORA28-201ENST00000606769 NKX1-1Q15270 411 aaPredicted RBP4.4□□□□□ -1.71
SNORA28-201ENST00000606769 KIF12Q96FN5 646 aa4.4□□□□□ -1.71
SNORA28-201ENST00000606769 RIOK3O14730 519 aaKnown RBP4.39□□□□□ -1.71
SNORA28-201ENST00000606769 DCAF8L2P0C7V8 631 aa4.39□□□□□ -1.71
SNORA28-201ENST00000606769 HS6ST3Q8IZP7 471 aa4.39□□□□□ -1.71
SNORA28-201ENST00000606769 PHF12Q96QT6 1004 aa4.39□□□□□ -1.71
SNORA28-201ENST00000606769 DNAJC5Q9H3Z4 198 aa4.39□□□□□ -1.71
SNORA28-201ENST00000606769 MAP3K13O43283 966 aa4.38□□□□□ -1.71
SNORA28-201ENST00000606769 CD44P16070 742 aaKnown RBP4.38□□□□□ -1.71
SNORA28-201ENST00000606769 SGIP1Q9BQI5 828 aa4.38□□□□□ -1.71
SNORA28-201ENST00000606769 PCDHB8Q9UN66 801 aa4.38□□□□□ -1.71
SNORA28-201ENST00000606769 TRPC6Q9Y210 931 aa4.38□□□□□ -1.71
SNORA28-201ENST00000606769 PCDHB13Q9Y5F0 798 aa4.38□□□□□ -1.71
SNORA28-201ENST00000606769 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.37□□□□□ -1.71
SNORA28-201ENST00000606769 SLC24A1O60721 1099 aa4.37□□□□□ -1.71
SNORA28-201ENST00000606769 CHGAP10645 457 aaKnown RBP4.37□□□□□ -1.71
SNORA28-201ENST00000606769 PLCB2Q00722 1185 aa4.37□□□□□ -1.71
SNORA28-201ENST00000606769 IFNL1Q8IU54 200 aa4.37□□□□□ -1.71
SNORA28-201ENST00000606769 ZFP91Q96JP5 570 aaPredicted RBP4.37□□□□□ -1.71
SNORA28-201ENST00000606769 ZRANB1Q9UGI0 708 aa4.37□□□□□ -1.71
SNORA28-201ENST00000606769 VGFO15240 615 aaPredicted RBP4.36□□□□□ -1.71
SNORA28-201ENST00000606769 ZNF579Q8NAF0 562 aaKnown RBP4.36□□□□□ -1.71
SNORA28-201ENST00000606769 BBXQ8WY36 941 aaPredicted RBP4.36□□□□□ -1.71
SNORA28-201ENST00000606769 GTPBP6O43824 516 aaPredicted RBP4.33□□□□□ -1.72
SNORA28-201ENST00000606769 MS4A3Q96HJ5 214 aa4.33□□□□□ -1.72
SNORA28-201ENST00000606769 BCL11BQ9C0K0 894 aaPredicted RBP4.33□□□□□ -1.72
SNORA28-201ENST00000606769 STK25O00506 426 aa4.32□□□□□ -1.72
SNORA28-201ENST00000606769 PSEN1P49768 467 aa4.32□□□□□ -1.72
SNORA28-201ENST00000606769 ZNF467Q7Z7K2 595 aaPredicted RBP4.32□□□□□ -1.72
SNORA28-201ENST00000606769 GALR2O43603 387 aaPredicted RBP4.31□□□□□ -1.72
SNORA28-201ENST00000606769 PAK3O75914 559 aaPredicted RBP4.31□□□□□ -1.72
SNORA28-201ENST00000606769 PDAP1Q13442 181 aaKnown RBP4.31□□□□□ -1.72
SNORA28-201ENST00000606769 PAXIP1Q6ZW49 1069 aaPredicted RBP4.31□□□□□ -1.72
SNORA28-201ENST00000606769 STK24Q9Y6E0 443 aa4.31□□□□□ -1.72
SNORA28-201ENST00000606769 HAX1O00165 279 aa4.3□□□□□ -1.72
SNORA28-201ENST00000606769 TSHZ2Q9NRE2 1034 aa4.3□□□□□ -1.72
SNORA28-201ENST00000606769 KDM2AQ9Y2K7 1162 aa4.3□□□□□ -1.72
SNORA28-201ENST00000606769 CFAP44Q96MT7 982 aa4.29□□□□□ -1.72
SNORA28-201ENST00000606769 MFRPQ9BY79 579 aa4.29□□□□□ -1.72
SNORA28-201ENST00000606769 EFCAB3Q8N7B9 438 aa4.28□□□□□ -1.72
SNORA28-201ENST00000606769 SPRYD3Q8NCJ5 442 aa4.28□□□□□ -1.72
SNORA28-201ENST00000606769 FBXO22Q8NEZ5 403 aa4.28□□□□□ -1.72
SNORA28-201ENST00000606769 BMP2KQ9NSY1 1161 aaPredicted RBP4.28□□□□□ -1.72
SNORA28-201ENST00000606769 TTLL13PA6NNM8 815 aa4.27□□□□□ -1.73
SNORA28-201ENST00000606769 MS4A4AQ96JQ5 239 aa4.27□□□□□ -1.73
SNORA28-201ENST00000606769 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.27□□□□□ -1.73
SNORA28-201ENST00000606769 PPP1R37O75864 691 aa4.26□□□□□ -1.73
SNORA28-201ENST00000606769 GABBR2O75899 941 aa4.26□□□□□ -1.73
SNORA28-201ENST00000606769 HAP1P54257 671 aaPredicted RBP4.26□□□□□ -1.73
SNORA28-201ENST00000606769 ILDR1Q86SU0 546 aaPredicted RBP4.26□□□□□ -1.73
SNORA28-201ENST00000606769 TMEM106CQ9BVX2 250 aa4.26□□□□□ -1.73
SNORA28-201ENST00000606769 CABP2Q9NPB3 220 aa4.26□□□□□ -1.73
SNORA28-201ENST00000606769 TAOK2Q9UL54 1235 aa4.26□□□□□ -1.73
SNORA28-201ENST00000606769 POTEIP0CG38 1075 aa4.25□□□□□ -1.73
SNORA28-201ENST00000606769 TIE1P35590 1138 aa4.25□□□□□ -1.73
SNORA28-201ENST00000606769 CADPS2Q86UW7 1296 aa4.25□□□□□ -1.73
SNORA28-201ENST00000606769 PHF8Q9UPP1 1060 aa4.25□□□□□ -1.73
SNORA28-201ENST00000606769 ATMINO43313 823 aaPredicted RBP4.24□□□□□ -1.73
SNORA28-201ENST00000606769 ATN1P54259 1190 aaPredicted RBP4.24□□□□□ -1.73
SNORA28-201ENST00000606769 ASTLQ6HA08 431 aaPredicted RBP4.24□□□□□ -1.73
SNORA28-201ENST00000606769 PELP1Q8IZL8 1130 aaKnown RBP4.24□□□□□ -1.73
SNORA28-201ENST00000606769 VSIG10Q8N0Z9 540 aa4.22□□□□□ -1.73
SNORA28-201ENST00000606769 TRIM35Q9UPQ4 493 aa4.22□□□□□ -1.73
SNORA28-201ENST00000606769 POTEFA5A3E0 1075 aa4.21□□□□□ -1.74
SNORA28-201ENST00000606769 SOX12O15370 315 aa4.21□□□□□ -1.74
SNORA28-201ENST00000606769 DPY19L2Q6NUT2 758 aa4.21□□□□□ -1.74
SNORA28-201ENST00000606769 PDCD7Q8N8D1 485 aaKnown RBP4.21□□□□□ -1.74
SNORA28-201ENST00000606769 IRX5P78411 483 aaPredicted RBP4.2□□□□□ -1.74
SNORA28-201ENST00000606769 SP7Q8TDD2 431 aaPredicted RBP4.2□□□□□ -1.74
SNORA28-201ENST00000606769 CLCN6P51797 869 aa4.19□□□□□ -1.74
SNORA28-201ENST00000606769 NLRP6P59044 892 aa4.19□□□□□ -1.74
SNORA28-201ENST00000606769 COLQQ9Y215 455 aaPredicted RBP4.18□□□□□ -1.74
SNORA28-201ENST00000606769 NCKAP5LQ9HCH0 1330 aa4.17□□□□□ -1.74
SNORA28-201ENST00000606769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.16□□□□□ -1.74
SNORA28-201ENST00000606769 MKRN3Q13064 507 aaKnown RBP4.15□□□□□ -1.75
SNORA28-201ENST00000606769 IER5LQ5T953 404 aa4.15□□□□□ -1.75
SNORA28-201ENST00000606769 RYDENQ9NUL5 291 aaKnown RBP4.15□□□□□ -1.75
SNORA28-201ENST00000606769 POTEJP0CG39 1038 aa4.14□□□□□ -1.75
SNORA28-201ENST00000606769 TMEM121BQ9BXQ6 578 aaPredicted RBP4.14□□□□□ -1.75
SNORA28-201ENST00000606769 CRISPLD2Q9H0B8 497 aa4.14□□□□□ -1.75
SNORA28-201ENST00000606769 TMEM92Q6UXU6 159 aa4.13□□□□□ -1.75
SNORA28-201ENST00000606769 MICALL2Q8IY33 904 aa4.13□□□□□ -1.75
SNORA28-201ENST00000606769 OCEL1Q9H607 264 aa4.13□□□□□ -1.75
SNORA28-201ENST00000606769 POTEB2H3BUK9 544 aa4.12□□□□□ -1.75
SNORA28-201ENST00000606769 GOLGA2Q08379 1002 aa4.12□□□□□ -1.75
SNORA28-201ENST00000606769 MFSD10Q14728 455 aa4.12□□□□□ -1.75
SNORA28-201ENST00000606769 DCBLD2Q96PD2 775 aa4.12□□□□□ -1.75
SNORA28-201ENST00000606769 KIF3CO14782 793 aa4.11□□□□□ -1.75
SNORA28-201ENST00000606769 KCNV2Q8TDN2 545 aa4.11□□□□□ -1.75
SNORA28-201ENST00000606769 METRNQ9UJH8 293 aa4.11□□□□□ -1.75
SNORA28-201ENST00000606769 C7P10643 843 aa4.1□□□□□ -1.75
SNORA28-201ENST00000606769 SLC39A7Q92504 469 aa4.1□□□□□ -1.75
SNORA28-201ENST00000606769 BOLA1Q9Y3E2 137 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms