RNA–Protein interactions for RNA: ENST00000606671.5

ZEB1-225, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-225ENST00000606671 TRIM41Q8WV44 630 aa10.47□□□□□ -0.73
ZEB1-225ENST00000606671 RNF25Q96BH1 459 aaPredicted RBP10.42□□□□□ -0.74
ZEB1-225ENST00000606671 TSPYL2Q9H2G4 693 aaPredicted RBP10.42□□□□□ -0.74
ZEB1-225ENST00000606671 PYGBP11216 843 aa10.38□□□□□ -0.75
ZEB1-225ENST00000606671 CHRM1P11229 460 aaPredicted RBP10.37□□□□□ -0.75
ZEB1-225ENST00000606671 CCDC61Q9Y6R9 512 aa10.34□□□□□ -0.75
ZEB1-225ENST00000606671 RIOK3O14730 519 aaKnown RBP10.33□□□□□ -0.76
ZEB1-225ENST00000606671 SLC24A1O60721 1099 aa10.33□□□□□ -0.76
ZEB1-225ENST00000606671 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
ZEB1-225ENST00000606671 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
ZEB1-225ENST00000606671 CD44P16070 742 aaKnown RBP10.28□□□□□ -0.76
ZEB1-225ENST00000606671 PLCB2Q00722 1185 aa10.27□□□□□ -0.77
ZEB1-225ENST00000606671 BBXQ8WY36 941 aaPredicted RBP10.27□□□□□ -0.77
ZEB1-225ENST00000606671 VGFO15240 615 aaPredicted RBP10.25□□□□□ -0.77
ZEB1-225ENST00000606671 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
ZEB1-225ENST00000606671 ZRANB1Q9UGI0 708 aa10.25□□□□□ -0.77
ZEB1-225ENST00000606671 C19orf67A6NJJ6 358 aa10.23□□□□□ -0.77
ZEB1-225ENST00000606671 TAOK2Q9UL54 1235 aa10.23□□□□□ -0.77
ZEB1-225ENST00000606671 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.22□□□□□ -0.77
ZEB1-225ENST00000606671 ZFP91Q96JP5 570 aaPredicted RBP10.22□□□□□ -0.77
ZEB1-225ENST00000606671 PCDHB8Q9UN66 801 aa10.22□□□□□ -0.77
ZEB1-225ENST00000606671 PCDHB13Q9Y5F0 798 aa10.22□□□□□ -0.77
ZEB1-225ENST00000606671 MAP3K13O43283 966 aa10.21□□□□□ -0.77
ZEB1-225ENST00000606671 ZNF467Q7Z7K2 595 aaPredicted RBP10.21□□□□□ -0.77
ZEB1-225ENST00000606671 KIF12Q96FN5 646 aa10.21□□□□□ -0.77
ZEB1-225ENST00000606671 PHF12Q96QT6 1004 aa10.21□□□□□ -0.77
ZEB1-225ENST00000606671 STK25O00506 426 aa10.2□□□□□ -0.78
ZEB1-225ENST00000606671 SGIP1Q9BQI5 828 aa10.2□□□□□ -0.78
ZEB1-225ENST00000606671 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.2□□□□□ -0.78
ZEB1-225ENST00000606671 IFNL1Q8IU54 200 aa10.18□□□□□ -0.78
ZEB1-225ENST00000606671 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
ZEB1-225ENST00000606671 BCL11BQ9C0K0 894 aaPredicted RBP10.17□□□□□ -0.78
ZEB1-225ENST00000606671 PAXIP1Q6ZW49 1069 aaPredicted RBP10.16□□□□□ -0.78
ZEB1-225ENST00000606671 DNAJC5Q9H3Z4 198 aa10.16□□□□□ -0.78
ZEB1-225ENST00000606671 PDAP1Q13442 181 aaKnown RBP10.15□□□□□ -0.78
ZEB1-225ENST00000606671 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
ZEB1-225ENST00000606671 STK24Q9Y6E0 443 aa10.15□□□□□ -0.78
ZEB1-225ENST00000606671 CFAP44Q96MT7 982 aa10.14□□□□□ -0.79
ZEB1-225ENST00000606671 HAX1O00165 279 aa10.12□□□□□ -0.79
ZEB1-225ENST00000606671 PSEN1P49768 467 aa10.12□□□□□ -0.79
ZEB1-225ENST00000606671 EVX2Q03828 476 aa10.12□□□□□ -0.79
ZEB1-225ENST00000606671 HAP1P54257 671 aaPredicted RBP10.11□□□□□ -0.79
ZEB1-225ENST00000606671 SPRYD3Q8NCJ5 442 aa10.11□□□□□ -0.79
ZEB1-225ENST00000606671 MS4A3Q96HJ5 214 aa10.09□□□□□ -0.79
ZEB1-225ENST00000606671 TRPC6Q9Y210 931 aa10.06□□□□□ -0.8
ZEB1-225ENST00000606671 GTPBP6O43824 516 aaPredicted RBP10.05□□□□□ -0.8
ZEB1-225ENST00000606671 GALR2O43603 387 aaPredicted RBP10.01□□□□□ -0.81
ZEB1-225ENST00000606671 CABP2Q9NPB3 220 aa10.01□□□□□ -0.81
ZEB1-225ENST00000606671 TSHZ2Q9NRE2 1034 aa9.99□□□□□ -0.81
ZEB1-225ENST00000606671 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
ZEB1-225ENST00000606671 TMEM106CQ9BVX2 250 aa9.98□□□□□ -0.81
ZEB1-225ENST00000606671 MFRPQ9BY79 579 aa9.97□□□□□ -0.81
ZEB1-225ENST00000606671 TIE1P35590 1138 aa9.95□□□□□ -0.82
ZEB1-225ENST00000606671 RYDENQ9NUL5 291 aaKnown RBP9.95□□□□□ -0.82
ZEB1-225ENST00000606671 TTLL13PA6NNM8 815 aa9.94□□□□□ -0.82
ZEB1-225ENST00000606671 VSIG10Q8N0Z9 540 aa9.94□□□□□ -0.82
ZEB1-225ENST00000606671 BMP2KQ9NSY1 1161 aaPredicted RBP9.94□□□□□ -0.82
ZEB1-225ENST00000606671 CLCN6P51797 869 aa9.93□□□□□ -0.82
ZEB1-225ENST00000606671 KDM2AQ9Y2K7 1162 aa9.93□□□□□ -0.82
ZEB1-225ENST00000606671 PHF8Q9UPP1 1060 aa9.92□□□□□ -0.82
ZEB1-225ENST00000606671 FBXO22Q8NEZ5 403 aa9.91□□□□□ -0.82
ZEB1-225ENST00000606671 SOX12O15370 315 aa9.9□□□□□ -0.82
ZEB1-225ENST00000606671 SP7Q8TDD2 431 aaPredicted RBP9.9□□□□□ -0.82
ZEB1-225ENST00000606671 GABBR2O75899 941 aa9.89□□□□□ -0.83
ZEB1-225ENST00000606671 NLRP6P59044 892 aa9.88□□□□□ -0.83
ZEB1-225ENST00000606671 GOLGA2Q08379 1002 aa9.88□□□□□ -0.83
ZEB1-225ENST00000606671 TRIM35Q9UPQ4 493 aa9.87□□□□□ -0.83
ZEB1-225ENST00000606671 MS4A4AQ96JQ5 239 aa9.86□□□□□ -0.83
ZEB1-225ENST00000606671 PPP1R37O75864 691 aa9.85□□□□□ -0.83
ZEB1-225ENST00000606671 ATN1P54259 1190 aaPredicted RBP9.85□□□□□ -0.83
ZEB1-225ENST00000606671 MKRN3Q13064 507 aaKnown RBP9.85□□□□□ -0.83
ZEB1-225ENST00000606671 ATMINO43313 823 aaPredicted RBP9.84□□□□□ -0.83
ZEB1-225ENST00000606671 ASTLQ6HA08 431 aaPredicted RBP9.83□□□□□ -0.84
ZEB1-225ENST00000606671 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
ZEB1-225ENST00000606671 ILDR1Q86SU0 546 aaPredicted RBP9.79□□□□□ -0.84
ZEB1-225ENST00000606671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.79□□□□□ -0.841e-11■■■■■ 28.4
ZEB1-225ENST00000606671 PELP1Q8IZL8 1130 aaKnown RBP9.76□□□□□ -0.85
ZEB1-225ENST00000606671 DCBLD2Q96PD2 775 aa9.76□□□□□ -0.85
ZEB1-225ENST00000606671 IRX5P78411 483 aaPredicted RBP9.74□□□□□ -0.85
ZEB1-225ENST00000606671 PDCD7Q8N8D1 485 aaKnown RBP9.74□□□□□ -0.85
ZEB1-225ENST00000606671 IER5LQ5T953 404 aa9.73□□□□□ -0.85
ZEB1-225ENST00000606671 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
ZEB1-225ENST00000606671 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
ZEB1-225ENST00000606671 OCEL1Q9H607 264 aa9.69□□□□□ -0.86
ZEB1-225ENST00000606671 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
ZEB1-225ENST00000606671 NCKAP5LQ9HCH0 1330 aa9.66□□□□□ -0.86
ZEB1-225ENST00000606671 PLCG2P16885 1265 aa9.66□□□□□ -0.86
ZEB1-225ENST00000606671 POTEFA5A3E0 1075 aa9.65□□□□□ -0.86
ZEB1-225ENST00000606671 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
ZEB1-225ENST00000606671 MICALL2Q8IY33 904 aa9.64□□□□□ -0.87
ZEB1-225ENST00000606671 BCANQ96GW7 911 aa9.64□□□□□ -0.87
ZEB1-225ENST00000606671 SEC24BO95487 1268 aa9.63□□□□□ -0.87
ZEB1-225ENST00000606671 CRISPLD2Q9H0B8 497 aa9.63□□□□□ -0.87
ZEB1-225ENST00000606671 METRNQ9UJH8 293 aa9.63□□□□□ -0.87
ZEB1-225ENST00000606671 C7P10643 843 aa9.62□□□□□ -0.87
ZEB1-225ENST00000606671 WDR70Q9NW82 654 aa9.62□□□□□ -0.87
ZEB1-225ENST00000606671 TMEM121BQ9BXQ6 578 aaPredicted RBP9.61□□□□□ -0.87
ZEB1-225ENST00000606671 BOLA1Q9Y3E2 137 aa9.61□□□□□ -0.87
ZEB1-225ENST00000606671 LARP6Q9BRS8 491 aaKnown RBP9.6□□□□□ -0.87
ZEB1-225ENST00000606671 PDE4AP27815 886 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms