RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 NUBP1P53384 320 aa9.29□□□□□ -0.92
ZEB1-224ENST00000606161 LHX8Q68G74 356 aa9.28□□□□□ -0.92
ZEB1-224ENST00000606161 KIF12Q96FN5 646 aa9.27□□□□□ -0.93
ZEB1-224ENST00000606161 PELP1Q8IZL8 1130 aaKnown RBP9.25□□□□□ -0.93
ZEB1-224ENST00000606161 FBXO3Q9UK99 471 aa9.24□□□□□ -0.93
ZEB1-224ENST00000606161 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
ZEB1-224ENST00000606161 MAP3K13O43283 966 aa9.22□□□□□ -0.93
ZEB1-224ENST00000606161 ZBTB47Q9UFB7 747 aaPredicted RBP9.22□□□□□ -0.93
ZEB1-224ENST00000606161 VASPP50552 380 aaPredicted RBP9.21□□□□□ -0.94
ZEB1-224ENST00000606161 ASTLQ6HA08 431 aaPredicted RBP9.21□□□□□ -0.94
ZEB1-224ENST00000606161 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
ZEB1-224ENST00000606161 POTEB2H3BUK9 544 aa9.18□□□□□ -0.94
ZEB1-224ENST00000606161 ATN1P54259 1190 aaPredicted RBP9.16□□□□□ -0.94
ZEB1-224ENST00000606161 BMP2KQ9NSY1 1161 aaPredicted RBP9.15□□□□□ -0.94
ZEB1-224ENST00000606161 FAM212AQ96EL1 285 aa9.14□□□□□ -0.95
ZEB1-224ENST00000606161 IFNL1Q8IU54 200 aa9.11□□□□□ -0.95
ZEB1-224ENST00000606161 METRNQ9UJH8 293 aa9.11□□□□□ -0.95
ZEB1-224ENST00000606161 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
ZEB1-224ENST00000606161 TIE1P35590 1138 aa9.1□□□□□ -0.95
ZEB1-224ENST00000606161 IFNLR1Q8IU57 520 aaPredicted RBP9.1□□□□□ -0.95
ZEB1-224ENST00000606161 TTLL13PA6NNM8 815 aa9.09□□□□□ -0.95
ZEB1-224ENST00000606161 SGIP1Q9BQI5 828 aa9.09□□□□□ -0.95
ZEB1-224ENST00000606161 POTEFA5A3E0 1075 aa9.08□□□□□ -0.96
ZEB1-224ENST00000606161 POTEJP0CG39 1038 aa9.08□□□□□ -0.96
ZEB1-224ENST00000606161 DCAF8Q5TAQ9 597 aa9.08□□□□□ -0.96
ZEB1-224ENST00000606161 SLC39A7Q92504 469 aa9.08□□□□□ -0.96
ZEB1-224ENST00000606161 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
ZEB1-224ENST00000606161 PYGBP11216 843 aa9.07□□□□□ -0.96
ZEB1-224ENST00000606161 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
ZEB1-224ENST00000606161 C7P10643 843 aa9.06□□□□□ -0.96
ZEB1-224ENST00000606161 PCDHB8Q9UN66 801 aa9.01□□□□□ -0.97
ZEB1-224ENST00000606161 TRIM35Q9UPQ4 493 aa9.01□□□□□ -0.97
ZEB1-224ENST00000606161 COLQQ9Y215 455 aaPredicted RBP9□□□□□ -0.97
ZEB1-224ENST00000606161 TMEM106CQ9BVX2 250 aa8.99□□□□□ -0.97
ZEB1-224ENST00000606161 GSE1Q14687 1217 aa8.98□□□□□ -0.97
ZEB1-224ENST00000606161 SPOCK2Q92563 424 aa8.98□□□□□ -0.97
ZEB1-224ENST00000606161 CHRM1P11229 460 aaPredicted RBP8.93□□□□□ -0.98
ZEB1-224ENST00000606161 IER5LQ5T953 404 aa8.93□□□□□ -0.98
ZEB1-224ENST00000606161 IRX5P78411 483 aaPredicted RBP8.9□□□□□ -0.98
ZEB1-224ENST00000606161 CIZ1Q9ULV3 898 aaPredicted RBP8.9□□□□□ -0.98
ZEB1-224ENST00000606161 SEC24BO95487 1268 aa8.89□□□□□ -0.99
ZEB1-224ENST00000606161 ZNF467Q7Z7K2 595 aaPredicted RBP8.89□□□□□ -0.99
ZEB1-224ENST00000606161 MAMSTRQ6ZN01 415 aa8.86□□□□□ -0.99
ZEB1-224ENST00000606161 PSEN1P49768 467 aa8.84□□□□□ -0.99
ZEB1-224ENST00000606161 SCUBE2Q9NQ36 999 aa8.84□□□□□ -0.99
ZEB1-224ENST00000606161 LCE2DQ5TA82 110 aaPredicted RBP8.83□□□□□ -1
ZEB1-224ENST00000606161 PLCG2P16885 1265 aa8.82□□□□□ -1
ZEB1-224ENST00000606161 PDCD7Q8N8D1 485 aaKnown RBP8.81□□□□□ -1
ZEB1-224ENST00000606161 PDAP1Q13442 181 aaKnown RBP8.8□□□□□ -1
ZEB1-224ENST00000606161 OCEL1Q9H607 264 aa8.8□□□□□ -1
ZEB1-224ENST00000606161 RNF25Q96BH1 459 aaPredicted RBP8.79□□□□□ -1
ZEB1-224ENST00000606161 ILDR1Q86SU0 546 aaPredicted RBP8.76□□□□□ -1.01
ZEB1-224ENST00000606161 CABP2Q9NPB3 220 aa8.75□□□□□ -1.01
ZEB1-224ENST00000606161 POTEMA6NI47 508 aa8.74□□□□□ -1.01
ZEB1-224ENST00000606161 MKRN3Q13064 507 aaKnown RBP8.74□□□□□ -1.01
ZEB1-224ENST00000606161 TRIM41Q8WV44 630 aa8.74□□□□□ -1.01
ZEB1-224ENST00000606161 GOLGA2Q08379 1002 aa8.73□□□□□ -1.01
ZEB1-224ENST00000606161 POTEGQ6S5H5 508 aa8.72□□□□□ -1.01
ZEB1-224ENST00000606161 SLAIN1Q8ND83 568 aa8.72□□□□□ -1.01
ZEB1-224ENST00000606161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.72□□□□□ -1.011e-11■■■■■ 28.4
ZEB1-224ENST00000606161 DPY19L2Q6NUT2 758 aa8.71□□□□□ -1.02
ZEB1-224ENST00000606161 FAM163AQ96GL9 167 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-224ENST00000606161 RIOK3O14730 519 aaKnown RBP8.68□□□□□ -1.02
ZEB1-224ENST00000606161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.67□□□□□ -1.02
ZEB1-224ENST00000606161 EFCAB3Q8N7B9 438 aa8.67□□□□□ -1.02
ZEB1-224ENST00000606161 ZFP91Q96JP5 570 aaPredicted RBP8.67□□□□□ -1.02
ZEB1-224ENST00000606161 PKD2Q13563 968 aa8.65□□□□□ -1.02
ZEB1-224ENST00000606161 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.64□□□□□ -1.03
ZEB1-224ENST00000606161 VGFO15240 615 aaPredicted RBP8.63□□□□□ -1.03
ZEB1-224ENST00000606161 ST18O60284 1047 aa8.63□□□□□ -1.03
ZEB1-224ENST00000606161 L3MBTL3Q96JM7 780 aaPredicted RBP8.63□□□□□ -1.03
ZEB1-224ENST00000606161 C3orf67Q6ZVT6 689 aa8.6□□□□□ -1.03
ZEB1-224ENST00000606161 MS4A4AQ96JQ5 239 aa8.6□□□□□ -1.03
ZEB1-224ENST00000606161 BOLA1Q9Y3E2 137 aa8.59□□□□□ -1.03
ZEB1-224ENST00000606161 RGL2O15211 777 aa8.58□□□□□ -1.04
ZEB1-224ENST00000606161 ECM2O94769 699 aaPredicted RBP8.58□□□□□ -1.04
ZEB1-224ENST00000606161 TMEM121BQ9BXQ6 578 aaPredicted RBP8.57□□□□□ -1.04
ZEB1-224ENST00000606161 PHF8Q9UPP1 1060 aa8.57□□□□□ -1.04
ZEB1-224ENST00000606161 BCL11BQ9C0K0 894 aaPredicted RBP8.56□□□□□ -1.04
ZEB1-224ENST00000606161 PLSCR2Q9NRY7 297 aa8.55□□□□□ -1.04
ZEB1-224ENST00000606161 SOX12O15370 315 aa8.54□□□□□ -1.04
ZEB1-224ENST00000606161 TMEM92Q6UXU6 159 aa8.53□□□□□ -1.04
ZEB1-224ENST00000606161 MICALL2Q8IY33 904 aa8.53□□□□□ -1.04
ZEB1-224ENST00000606161 FBXO22Q8NEZ5 403 aa8.52□□□□□ -1.05
ZEB1-224ENST00000606161 STK24Q9Y6E0 443 aa8.52□□□□□ -1.05
ZEB1-224ENST00000606161 MFRPQ9BY79 579 aa8.51□□□□□ -1.05
ZEB1-224ENST00000606161 STK25O00506 426 aa8.5□□□□□ -1.05
ZEB1-224ENST00000606161 SNPHO15079 494 aa8.5□□□□□ -1.05
ZEB1-224ENST00000606161 HOXB3P14651 431 aaPredicted RBP8.5□□□□□ -1.05
ZEB1-224ENST00000606161 MARVELD3Q96A59 401 aa8.5□□□□□ -1.05
ZEB1-224ENST00000606161 PCDH10Q9P2E7 1040 aa8.5□□□□□ -1.05
ZEB1-224ENST00000606161 G3V3G9 751 aa8.49□□□□□ -1.05
ZEB1-224ENST00000606161 CDAN1Q8IWY9 1227 aa8.48□□□□□ -1.05
ZEB1-224ENST00000606161 TAOK2Q9UL54 1235 aa8.46□□□□□ -1.06
ZEB1-224ENST00000606161 NLRP6P59044 892 aa8.45□□□□□ -1.06
ZEB1-224ENST00000606161 POTEB3A0JP26 581 aa8.44□□□□□ -1.06
ZEB1-224ENST00000606161 POTEBQ6S5H4 581 aa8.44□□□□□ -1.06
ZEB1-224ENST00000606161 EMP3P54852 163 aa8.41□□□□□ -1.06
ZEB1-224ENST00000606161 PPP1R37O75864 691 aa8.38□□□□□ -1.07
ZEB1-224ENST00000606161 HOXB1P14653 301 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms