RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 CD44P16070 742 aaKnown RBP10.26□□□□□ -0.77
TUBE1-209ENST00000604814 TPRNQ4KMQ1 711 aa10.26□□□□□ -0.77
TUBE1-209ENST00000604814 ARXQ96QS3 562 aa10.26□□□□□ -0.77
TUBE1-209ENST00000604814 C19orf67A6NJJ6 358 aa10.26□□□□□ -0.77
TUBE1-209ENST00000604814 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
TUBE1-209ENST00000604814 NUBP1P53384 320 aa10.24□□□□□ -0.77
TUBE1-209ENST00000604814 TSPYL2Q9H2G4 693 aaPredicted RBP10.24□□□□□ -0.77
TUBE1-209ENST00000604814 TIMELESSQ9UNS1 1208 aa10.24□□□□□ -0.77
TUBE1-209ENST00000604814 RASEFQ8IZ41 740 aa10.23□□□□□ -0.77
TUBE1-209ENST00000604814 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.78
TUBE1-209ENST00000604814 FAM212AQ96EL1 285 aa10.21□□□□□ -0.78
TUBE1-209ENST00000604814 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.78
TUBE1-209ENST00000604814 EVX2Q03828 476 aa10.19□□□□□ -0.78
TUBE1-209ENST00000604814 CIZ1Q9ULV3 898 aaPredicted RBP10.17□□□□□ -0.78
TUBE1-209ENST00000604814 TULP1O00294 542 aaPredicted RBP10.15□□□□□ -0.78
TUBE1-209ENST00000604814 GSE1Q14687 1217 aa10.15□□□□□ -0.78
TUBE1-209ENST00000604814 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
TUBE1-209ENST00000604814 VSIG10Q8N0Z9 540 aa10.09□□□□□ -0.79
TUBE1-209ENST00000604814 ZNF579Q8NAF0 562 aaKnown RBP10.09□□□□□ -0.79
TUBE1-209ENST00000604814 PHF12Q96QT6 1004 aa10.09□□□□□ -0.79
TUBE1-209ENST00000604814 PYGBP11216 843 aa10.06□□□□□ -0.8
TUBE1-209ENST00000604814 KIF12Q96FN5 646 aa10.02□□□□□ -0.81
TUBE1-209ENST00000604814 TRIM41Q8WV44 630 aa10.01□□□□□ -0.81
TUBE1-209ENST00000604814 GABBR2O75899 941 aa10.01□□□□□ -0.81
TUBE1-209ENST00000604814 CLCN6P51797 869 aa10.01□□□□□ -0.81
TUBE1-209ENST00000604814 MAP3K13O43283 966 aa10□□□□□ -0.81
TUBE1-209ENST00000604814 HOMEZQ8IX15 550 aa10□□□□□ -0.81
TUBE1-209ENST00000604814 ECM2O94769 699 aaPredicted RBP9.98□□□□□ -0.81
TUBE1-209ENST00000604814 PKD2Q13563 968 aa9.98□□□□□ -0.81
TUBE1-209ENST00000604814 PCDHB13Q9Y5F0 798 aa9.98□□□□□ -0.81
TUBE1-209ENST00000604814 CHRM1P11229 460 aaPredicted RBP9.98□□□□□ -0.81
TUBE1-209ENST00000604814 GTF3C3Q9Y5Q9 886 aa9.97□□□□□ -0.81
TUBE1-209ENST00000604814 MS4A3Q96HJ5 214 aa9.96□□□□□ -0.81
TUBE1-209ENST00000604814 GALR2O43603 387 aaPredicted RBP9.96□□□□□ -0.82
TUBE1-209ENST00000604814 DCAF8L2P0C7V8 631 aa9.96□□□□□ -0.82
TUBE1-209ENST00000604814 SGIP1Q9BQI5 828 aa9.95□□□□□ -0.82
TUBE1-209ENST00000604814 IFNL1Q8IU54 200 aa9.92□□□□□ -0.82
TUBE1-209ENST00000604814 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
TUBE1-209ENST00000604814 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
TUBE1-209ENST00000604814 ZNF467Q7Z7K2 595 aaPredicted RBP9.91□□□□□ -0.82
TUBE1-209ENST00000604814 KDM2AQ9Y2K7 1162 aa9.89□□□□□ -0.83
TUBE1-209ENST00000604814 DCBLD2Q96PD2 775 aa9.88□□□□□ -0.83
TUBE1-209ENST00000604814 RIOK3O14730 519 aaKnown RBP9.86□□□□□ -0.83
TUBE1-209ENST00000604814 RGL2O15211 777 aa9.86□□□□□ -0.83
TUBE1-209ENST00000604814 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
TUBE1-209ENST00000604814 RNF25Q96BH1 459 aaPredicted RBP9.85□□□□□ -0.83
TUBE1-209ENST00000604814 RANGAP1P46060 587 aaPredicted RBP9.83□□□□□ -0.84
TUBE1-209ENST00000604814 PDAP1Q13442 181 aaKnown RBP9.82□□□□□ -0.84
TUBE1-209ENST00000604814 TIE1P35590 1138 aa9.81□□□□□ -0.84
TUBE1-209ENST00000604814 PSEN1P49768 467 aa9.81□□□□□ -0.84
TUBE1-209ENST00000604814 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
TUBE1-209ENST00000604814 VGFO15240 615 aaPredicted RBP9.8□□□□□ -0.84
TUBE1-209ENST00000604814 BMP2KQ9NSY1 1161 aaPredicted RBP9.8□□□□□ -0.84
TUBE1-209ENST00000604814 TTLL13PA6NNM8 815 aa9.78□□□□□ -0.84
TUBE1-209ENST00000604814 ATMINO43313 823 aaPredicted RBP9.77□□□□□ -0.85
TUBE1-209ENST00000604814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-209ENST00000604814 POTEIP0CG38 1075 aa9.76□□□□□ -0.85
TUBE1-209ENST00000604814 ZFP91Q96JP5 570 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-209ENST00000604814 ATN1P54259 1190 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-209ENST00000604814 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-209ENST00000604814 TMEM132AQ24JP5 1023 aa9.75□□□□□ -0.85
TUBE1-209ENST00000604814 GOLGA2Q08379 1002 aa9.73□□□□□ -0.85
TUBE1-209ENST00000604814 STK25O00506 426 aa9.73□□□□□ -0.85
TUBE1-209ENST00000604814 TRIM35Q9UPQ4 493 aa9.73□□□□□ -0.85
TUBE1-209ENST00000604814 C14orf37Q86TY3 774 aa9.71□□□□□ -0.85
TUBE1-209ENST00000604814 BCL11BQ9C0K0 894 aaPredicted RBP9.71□□□□□ -0.85
TUBE1-209ENST00000604814 STK24Q9Y6E0 443 aa9.71□□□□□ -0.85
TUBE1-209ENST00000604814 PELP1Q8IZL8 1130 aaKnown RBP9.7□□□□□ -0.86
TUBE1-209ENST00000604814 CABP2Q9NPB3 220 aa9.7□□□□□ -0.86
TUBE1-209ENST00000604814 CHGAP10645 457 aaKnown RBP9.7□□□□□ -0.86
TUBE1-209ENST00000604814 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.7□□□□□ -0.86
TUBE1-209ENST00000604814 MKRN3Q13064 507 aaKnown RBP9.68□□□□□ -0.86
TUBE1-209ENST00000604814 SLC39A7Q92504 469 aa9.67□□□□□ -0.86
TUBE1-209ENST00000604814 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
TUBE1-209ENST00000604814 LHX8Q68G74 356 aa9.66□□□□□ -0.86
TUBE1-209ENST00000604814 PAXIP1Q6ZW49 1069 aaPredicted RBP9.66□□□□□ -0.86
TUBE1-209ENST00000604814 C7P10643 843 aa9.65□□□□□ -0.87
TUBE1-209ENST00000604814 HS6ST3Q8IZP7 471 aa9.64□□□□□ -0.87
TUBE1-209ENST00000604814 CFAP44Q96MT7 982 aa9.64□□□□□ -0.87
TUBE1-209ENST00000604814 EFCAB3Q8N7B9 438 aa9.63□□□□□ -0.87
TUBE1-209ENST00000604814 METRNQ9UJH8 293 aa9.63□□□□□ -0.87
TUBE1-209ENST00000604814 SEC24BO95487 1268 aa9.63□□□□□ -0.87
TUBE1-209ENST00000604814 IER5LQ5T953 404 aa9.63□□□□□ -0.87
TUBE1-209ENST00000604814 NBR1Q14596 966 aa9.62□□□□□ -0.87
TUBE1-209ENST00000604814 BBXQ8WY36 941 aaPredicted RBP9.62□□□□□ -0.87
TUBE1-209ENST00000604814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.59□□□□□ -0.872e-7■■■■□ 26.5
TUBE1-209ENST00000604814 PLCG2P16885 1265 aa9.58□□□□□ -0.88
TUBE1-209ENST00000604814 SOX12O15370 315 aa9.58□□□□□ -0.88
TUBE1-209ENST00000604814 OCEL1Q9H607 264 aa9.57□□□□□ -0.88
TUBE1-209ENST00000604814 IRX5P78411 483 aaPredicted RBP9.56□□□□□ -0.88
TUBE1-209ENST00000604814 COLQQ9Y215 455 aaPredicted RBP9.56□□□□□ -0.88
TUBE1-209ENST00000604814 TSHZ2Q9NRE2 1034 aa9.54□□□□□ -0.88
TUBE1-209ENST00000604814 PHF8Q9UPP1 1060 aa9.54□□□□□ -0.88
TUBE1-209ENST00000604814 NLRP6P59044 892 aa9.53□□□□□ -0.88
TUBE1-209ENST00000604814 POTEFA5A3E0 1075 aa9.52□□□□□ -0.88
TUBE1-209ENST00000604814 MFRPQ9BY79 579 aa9.5□□□□□ -0.89
TUBE1-209ENST00000604814 DNAJC5Q9H3Z4 198 aa9.5□□□□□ -0.89
TUBE1-209ENST00000604814 PDCD7Q8N8D1 485 aaKnown RBP9.5□□□□□ -0.89
TUBE1-209ENST00000604814 NKX1-1Q15270 411 aaPredicted RBP9.49□□□□□ -0.89
TUBE1-209ENST00000604814 DPY19L2Q6NUT2 758 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms