RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 FARP1Q9Y4F1 1045 aaPredicted RBP18.59■□□□□ 0.57
SGMS1-206ENST00000602565 PIP4P2Q8N4L2 257 aa18.51■□□□□ 0.55
SGMS1-206ENST00000602565 TSPYL2Q9H2G4 693 aaPredicted RBP18.44■□□□□ 0.54
SGMS1-206ENST00000602565 PYGBP11216 843 aa18.38■□□□□ 0.53
SGMS1-206ENST00000602565 TAOK2Q9UL54 1235 aa18.38■□□□□ 0.53
SGMS1-206ENST00000602565 CHRM1P11229 460 aaPredicted RBP18.37■□□□□ 0.53
SGMS1-206ENST00000602565 RIOK3O14730 519 aaKnown RBP18.36■□□□□ 0.53
SGMS1-206ENST00000602565 PAK3O75914 559 aaPredicted RBP18.36■□□□□ 0.53
SGMS1-206ENST00000602565 RNF25Q96BH1 459 aaPredicted RBP18.36■□□□□ 0.53
SGMS1-206ENST00000602565 CHGAP10645 457 aaKnown RBP18.35■□□□□ 0.53
SGMS1-206ENST00000602565 PLCB2Q00722 1185 aa18.35■□□□□ 0.53
SGMS1-206ENST00000602565 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.34■□□□□ 0.53
SGMS1-206ENST00000602565 BBXQ8WY36 941 aaPredicted RBP18.33■□□□□ 0.53
SGMS1-206ENST00000602565 VGFO15240 615 aaPredicted RBP18.24■□□□□ 0.51
SGMS1-206ENST00000602565 HS6ST3Q8IZP7 471 aa18.23■□□□□ 0.51
SGMS1-206ENST00000602565 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
SGMS1-206ENST00000602565 ZNF467Q7Z7K2 595 aaPredicted RBP18.17■□□□□ 0.5
SGMS1-206ENST00000602565 SP7Q8TDD2 431 aaPredicted RBP18.17■□□□□ 0.5
SGMS1-206ENST00000602565 STK25O00506 426 aa18.16■□□□□ 0.5
SGMS1-206ENST00000602565 CD44P16070 742 aaKnown RBP18.16■□□□□ 0.5
SGMS1-206ENST00000602565 HAP1P54257 671 aaPredicted RBP18.15■□□□□ 0.5
SGMS1-206ENST00000602565 PAXIP1Q6ZW49 1069 aaPredicted RBP18.15■□□□□ 0.5
SGMS1-206ENST00000602565 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
SGMS1-206ENST00000602565 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
SGMS1-206ENST00000602565 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.1■□□□□ 0.49
SGMS1-206ENST00000602565 ZFP91Q96JP5 570 aaPredicted RBP18.1■□□□□ 0.49
SGMS1-206ENST00000602565 HAX1O00165 279 aa18.09■□□□□ 0.49
SGMS1-206ENST00000602565 SPRYD3Q8NCJ5 442 aa18.08■□□□□ 0.49
SGMS1-206ENST00000602565 SGIP1Q9BQI5 828 aa18.08■□□□□ 0.49
SGMS1-206ENST00000602565 STK24Q9Y6E0 443 aa18.07■□□□□ 0.48
SGMS1-206ENST00000602565 PCDHB13Q9Y5F0 798 aa18.06■□□□□ 0.48
SGMS1-206ENST00000602565 BCL11BQ9C0K0 894 aaPredicted RBP18.05■□□□□ 0.48
SGMS1-206ENST00000602565 PCDHB8Q9UN66 801 aa18.05■□□□□ 0.48
SGMS1-206ENST00000602565 ZNF579Q8NAF0 562 aaKnown RBP18.03■□□□□ 0.48
SGMS1-206ENST00000602565 PDAP1Q13442 181 aaKnown RBP18.01■□□□□ 0.47
SGMS1-206ENST00000602565 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
SGMS1-206ENST00000602565 MAP3K13O43283 966 aa18■□□□□ 0.47
SGMS1-206ENST00000602565 KIF12Q96FN5 646 aa18■□□□□ 0.47
SGMS1-206ENST00000602565 C19orf67A6NJJ6 358 aa17.97■□□□□ 0.47
SGMS1-206ENST00000602565 PHF12Q96QT6 1004 aa17.97■□□□□ 0.47
SGMS1-206ENST00000602565 IFNL1Q8IU54 200 aa17.95■□□□□ 0.46
SGMS1-206ENST00000602565 PSEN1P49768 467 aa17.94■□□□□ 0.46
SGMS1-206ENST00000602565 NKX1-1Q15270 411 aaPredicted RBP17.9■□□□□ 0.46
SGMS1-206ENST00000602565 EVX2Q03828 476 aa17.86■□□□□ 0.45
SGMS1-206ENST00000602565 RYDENQ9NUL5 291 aaKnown RBP17.84■□□□□ 0.45
SGMS1-206ENST00000602565 VSIG10Q8N0Z9 540 aa17.8■□□□□ 0.44
SGMS1-206ENST00000602565 GTPBP6O43824 516 aaPredicted RBP17.79■□□□□ 0.44
SGMS1-206ENST00000602565 MS4A3Q96HJ5 214 aa17.76■□□□□ 0.43
SGMS1-206ENST00000602565 TSHZ2Q9NRE2 1034 aa17.76■□□□□ 0.43
SGMS1-206ENST00000602565 CABP2Q9NPB3 220 aa17.73■□□□□ 0.43
SGMS1-206ENST00000602565 TMEM106CQ9BVX2 250 aa17.68■□□□□ 0.42
SGMS1-206ENST00000602565 GOLGA2Q08379 1002 aa17.67■□□□□ 0.42
SGMS1-206ENST00000602565 EFCAB3Q8N7B9 438 aa17.65■□□□□ 0.42
SGMS1-206ENST00000602565 CLCN6P51797 869 aa17.63■□□□□ 0.41
SGMS1-206ENST00000602565 TRPC6Q9Y210 931 aa17.63■□□□□ 0.41
SGMS1-206ENST00000602565 MFRPQ9BY79 579 aa17.61■□□□□ 0.41
SGMS1-206ENST00000602565 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
SGMS1-206ENST00000602565 SOX12O15370 315 aa17.6■□□□□ 0.41
SGMS1-206ENST00000602565 TIE1P35590 1138 aa17.59■□□□□ 0.41
SGMS1-206ENST00000602565 GALR2O43603 387 aaPredicted RBP17.58■□□□□ 0.4
SGMS1-206ENST00000602565 NLRP6P59044 892 aa17.58■□□□□ 0.4
SGMS1-206ENST00000602565 MKRN3Q13064 507 aaKnown RBP17.54■□□□□ 0.4
SGMS1-206ENST00000602565 PHF8Q9UPP1 1060 aa17.53■□□□□ 0.4
SGMS1-206ENST00000602565 TTLL13PA6NNM8 815 aa17.51■□□□□ 0.39
SGMS1-206ENST00000602565 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
SGMS1-206ENST00000602565 FBXO22Q8NEZ5 403 aa17.48■□□□□ 0.39
SGMS1-206ENST00000602565 GABBR2O75899 941 aa17.45■□□□□ 0.38
SGMS1-206ENST00000602565 TRIM35Q9UPQ4 493 aa17.43■□□□□ 0.38
SGMS1-206ENST00000602565 PPP1R37O75864 691 aa17.39■□□□□ 0.37
SGMS1-206ENST00000602565 BCANQ96GW7 911 aa17.38■□□□□ 0.37
SGMS1-206ENST00000602565 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.36■□□□□ 0.37
SGMS1-206ENST00000602565 MS4A4AQ96JQ5 239 aa17.34■□□□□ 0.37
SGMS1-206ENST00000602565 ATN1P54259 1190 aaPredicted RBP17.33■□□□□ 0.36
SGMS1-206ENST00000602565 ATMINO43313 823 aaPredicted RBP17.31■□□□□ 0.36
SGMS1-206ENST00000602565 ASTLQ6HA08 431 aaPredicted RBP17.3■□□□□ 0.36
SGMS1-206ENST00000602565 CADPS2Q86UW7 1296 aa17.3■□□□□ 0.36
SGMS1-206ENST00000602565 DCBLD2Q96PD2 775 aa17.29■□□□□ 0.36
SGMS1-206ENST00000602565 WDR70Q9NW82 654 aa17.28■□□□□ 0.36
SGMS1-206ENST00000602565 IER5LQ5T953 404 aa17.21■□□□□ 0.35
SGMS1-206ENST00000602565 ILDR1Q86SU0 546 aaPredicted RBP17.21■□□□□ 0.35
SGMS1-206ENST00000602565 NBR1Q14596 966 aa17.17■□□□□ 0.34
SGMS1-206ENST00000602565 OCEL1Q9H607 264 aa17.16■□□□□ 0.34
SGMS1-206ENST00000602565 PLCG2P16885 1265 aa17.15■□□□□ 0.34
SGMS1-206ENST00000602565 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
SGMS1-206ENST00000602565 IRX5P78411 483 aaPredicted RBP17.14■□□□□ 0.33
SGMS1-206ENST00000602565 PDCD7Q8N8D1 485 aaKnown RBP17.13■□□□□ 0.33
SGMS1-206ENST00000602565 G3V3G9 751 aa17.12■□□□□ 0.33
SGMS1-206ENST00000602565 DPY19L2Q6NUT2 758 aa17.12■□□□□ 0.33
SGMS1-206ENST00000602565 PDE4AP27815 886 aa17.11■□□□□ 0.33
SGMS1-206ENST00000602565 SEC24BO95487 1268 aa17.1■□□□□ 0.33
SGMS1-206ENST00000602565 POTEIP0CG38 1075 aa17.07■□□□□ 0.32
SGMS1-206ENST00000602565 SLC39A7Q92504 469 aa17.07■□□□□ 0.32
SGMS1-206ENST00000602565 LARP6Q9BRS8 491 aaKnown RBP17.07■□□□□ 0.32
SGMS1-206ENST00000602565 PELP1Q8IZL8 1130 aaKnown RBP17.06■□□□□ 0.32
SGMS1-206ENST00000602565 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
SGMS1-206ENST00000602565 LHX8Q68G74 356 aa17.04■□□□□ 0.32
SGMS1-206ENST00000602565 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
SGMS1-206ENST00000602565 BOLA1Q9Y3E2 137 aa17.03■□□□□ 0.32
SGMS1-206ENST00000602565 CRISPLD2Q9H0B8 497 aa17.02■□□□□ 0.32
SGMS1-206ENST00000602565 DDX27Q96GQ7 796 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms