RNA–Protein interactions for RNA: ENST00000602395.1

COMMD3-BMI1-206, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-206ENST00000602395 CCDC61Q9Y6R9 512 aa17.15■□□□□ 0.34
COMMD3-BMI1-206ENST00000602395 NUBP1P53384 320 aa17.09■□□□□ 0.33
COMMD3-BMI1-206ENST00000602395 MS4A3Q96HJ5 214 aa17.05■□□□□ 0.32
COMMD3-BMI1-206ENST00000602395 KIF12Q96FN5 646 aa17.04■□□□□ 0.32
COMMD3-BMI1-206ENST00000602395 VASPP50552 380 aaPredicted RBP17.03■□□□□ 0.32
COMMD3-BMI1-206ENST00000602395 LHX8Q68G74 356 aa16.98■□□□□ 0.31
COMMD3-BMI1-206ENST00000602395 MAP3K13O43283 966 aa16.94■□□□□ 0.3
COMMD3-BMI1-206ENST00000602395 FAM212AQ96EL1 285 aa16.91■□□□□ 0.3
COMMD3-BMI1-206ENST00000602395 ASTLQ6HA08 431 aaPredicted RBP16.89■□□□□ 0.29
COMMD3-BMI1-206ENST00000602395 PELP1Q8IZL8 1130 aaKnown RBP16.89■□□□□ 0.29
COMMD3-BMI1-206ENST00000602395 ATMINO43313 823 aaPredicted RBP16.87■□□□□ 0.29
COMMD3-BMI1-206ENST00000602395 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
COMMD3-BMI1-206ENST00000602395 DCAF8Q5TAQ9 597 aa16.83■□□□□ 0.28
COMMD3-BMI1-206ENST00000602395 SGIP1Q9BQI5 828 aa16.83■□□□□ 0.28
COMMD3-BMI1-206ENST00000602395 TRPC6Q9Y210 931 aa16.82■□□□□ 0.28
COMMD3-BMI1-206ENST00000602395 PCDHB13Q9Y5F0 798 aa16.79■□□□□ 0.28
COMMD3-BMI1-206ENST00000602395 IFNLR1Q8IU57 520 aaPredicted RBP16.77■□□□□ 0.28
COMMD3-BMI1-206ENST00000602395 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.28
COMMD3-BMI1-206ENST00000602395 ATN1P54259 1190 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-BMI1-206ENST00000602395 TIE1P35590 1138 aa16.75■□□□□ 0.27
COMMD3-BMI1-206ENST00000602395 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
COMMD3-BMI1-206ENST00000602395 SLC39A7Q92504 469 aa16.72■□□□□ 0.27
COMMD3-BMI1-206ENST00000602395 C7P10643 843 aa16.71■□□□□ 0.27
COMMD3-BMI1-206ENST00000602395 POTEB2H3BUK9 544 aa16.7■□□□□ 0.26
COMMD3-BMI1-206ENST00000602395 PYGBP11216 843 aa16.7■□□□□ 0.26
COMMD3-BMI1-206ENST00000602395 METRNQ9UJH8 293 aa16.7■□□□□ 0.26
COMMD3-BMI1-206ENST00000602395 GSE1Q14687 1217 aa16.69■□□□□ 0.26
COMMD3-BMI1-206ENST00000602395 TTLL13PA6NNM8 815 aa16.67■□□□□ 0.26
COMMD3-BMI1-206ENST00000602395 SPOCK2Q92563 424 aa16.66■□□□□ 0.26
COMMD3-BMI1-206ENST00000602395 CHRM1P11229 460 aaPredicted RBP16.58■□□□□ 0.24
COMMD3-BMI1-206ENST00000602395 OTUD5Q96G74 571 aa16.56■□□□□ 0.24
COMMD3-BMI1-206ENST00000602395 PCDHB8Q9UN66 801 aa16.56■□□□□ 0.24
COMMD3-BMI1-206ENST00000602395 TMEM106CQ9BVX2 250 aa16.55■□□□□ 0.24
COMMD3-BMI1-206ENST00000602395 TRIM35Q9UPQ4 493 aa16.55■□□□□ 0.24
COMMD3-BMI1-206ENST00000602395 POTEFA5A3E0 1075 aa16.54■□□□□ 0.24
COMMD3-BMI1-206ENST00000602395 POTEJP0CG39 1038 aa16.52■□□□□ 0.24
COMMD3-BMI1-206ENST00000602395 CIZ1Q9ULV3 898 aaPredicted RBP16.49■□□□□ 0.23
COMMD3-BMI1-206ENST00000602395 IER5LQ5T953 404 aa16.48■□□□□ 0.23
COMMD3-BMI1-206ENST00000602395 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
COMMD3-BMI1-206ENST00000602395 COLQQ9Y215 455 aaPredicted RBP16.46■□□□□ 0.23
COMMD3-BMI1-206ENST00000602395 SEC24BO95487 1268 aa16.42■□□□□ 0.22
COMMD3-BMI1-206ENST00000602395 MAMSTRQ6ZN01 415 aa16.38■□□□□ 0.21
COMMD3-BMI1-206ENST00000602395 IRX5P78411 483 aaPredicted RBP16.33■□□□□ 0.2
COMMD3-BMI1-206ENST00000602395 PSEN1P49768 467 aa16.32■□□□□ 0.2
COMMD3-BMI1-206ENST00000602395 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
COMMD3-BMI1-206ENST00000602395 SCUBE2Q9NQ36 999 aa16.29■□□□□ 0.2
COMMD3-BMI1-206ENST00000602395 PLCG2P16885 1265 aa16.28■□□□□ 0.2
COMMD3-BMI1-206ENST00000602395 PDAP1Q13442 181 aaKnown RBP16.27■□□□□ 0.2
COMMD3-BMI1-206ENST00000602395 OCEL1Q9H607 264 aa16.26■□□□□ 0.19
COMMD3-BMI1-206ENST00000602395 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
COMMD3-BMI1-206ENST00000602395 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
COMMD3-BMI1-206ENST00000602395 PDCD7Q8N8D1 485 aaKnown RBP16.13■□□□□ 0.17
COMMD3-BMI1-206ENST00000602395 RNF25Q96BH1 459 aaPredicted RBP16.11■□□□□ 0.17
COMMD3-BMI1-206ENST00000602395 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
COMMD3-BMI1-206ENST00000602395 ILDR1Q86SU0 546 aaPredicted RBP16.09■□□□□ 0.17
COMMD3-BMI1-206ENST00000602395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■□□□□ 9.5
COMMD3-BMI1-206ENST00000602395 RIOK3O14730 519 aaKnown RBP16.08■□□□□ 0.16
COMMD3-BMI1-206ENST00000602395 SLAIN1Q8ND83 568 aa16.03■□□□□ 0.16
COMMD3-BMI1-206ENST00000602395 VGFO15240 615 aaPredicted RBP16■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 LCE2DQ5TA82 110 aaPredicted RBP15.99■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 FAM163AQ96GL9 167 aaPredicted RBP15.99■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 L3MBTL3Q96JM7 780 aaPredicted RBP15.99■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 DPY19L2Q6NUT2 758 aa15.98■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.97■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 EFCAB3Q8N7B9 438 aa15.97■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 ZFP91Q96JP5 570 aaPredicted RBP15.97■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.96■□□□□ 0.15
COMMD3-BMI1-206ENST00000602395 PKD2Q13563 968 aa15.95■□□□□ 0.14
COMMD3-BMI1-206ENST00000602395 POTEMA6NI47 508 aa15.94■□□□□ 0.14
COMMD3-BMI1-206ENST00000602395 ECM2O94769 699 aaPredicted RBP15.92■□□□□ 0.14
COMMD3-BMI1-206ENST00000602395 POTEGQ6S5H5 508 aa15.92■□□□□ 0.14
COMMD3-BMI1-206ENST00000602395 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
COMMD3-BMI1-206ENST00000602395 TAOK2Q9UL54 1235 aa15.87■□□□□ 0.13
COMMD3-BMI1-206ENST00000602395 SOX12O15370 315 aa15.85■□□□□ 0.13
COMMD3-BMI1-206ENST00000602395 BOLA1Q9Y3E2 137 aa15.85■□□□□ 0.13
COMMD3-BMI1-206ENST00000602395 RGL2O15211 777 aa15.82■□□□□ 0.12
COMMD3-BMI1-206ENST00000602395 BCL11BQ9C0K0 894 aaPredicted RBP15.81■□□□□ 0.12
COMMD3-BMI1-206ENST00000602395 G3V3G9 751 aa15.78■□□□□ 0.12
COMMD3-BMI1-206ENST00000602395 ST18O60284 1047 aa15.78■□□□□ 0.12
COMMD3-BMI1-206ENST00000602395 TMEM121BQ9BXQ6 578 aaPredicted RBP15.78■□□□□ 0.12
COMMD3-BMI1-206ENST00000602395 PHF8Q9UPP1 1060 aa15.77■□□□□ 0.12
COMMD3-BMI1-206ENST00000602395 SNPHO15079 494 aa15.76■□□□□ 0.11
COMMD3-BMI1-206ENST00000602395 MS4A4AQ96JQ5 239 aa15.76■□□□□ 0.11
COMMD3-BMI1-206ENST00000602395 STK24Q9Y6E0 443 aa15.76■□□□□ 0.11
COMMD3-BMI1-206ENST00000602395 STK25O00506 426 aa15.73■□□□□ 0.11
COMMD3-BMI1-206ENST00000602395 PCDH10Q9P2E7 1040 aa15.71■□□□□ 0.11
COMMD3-BMI1-206ENST00000602395 NLRP6P59044 892 aa15.68■□□□□ 0.1
COMMD3-BMI1-206ENST00000602395 FBXO22Q8NEZ5 403 aa15.68■□□□□ 0.1
COMMD3-BMI1-206ENST00000602395 MICALL2Q8IY33 904 aa15.67■□□□□ 0.1
COMMD3-BMI1-206ENST00000602395 MFRPQ9BY79 579 aa15.65■□□□□ 0.1
COMMD3-BMI1-206ENST00000602395 TMEM92Q6UXU6 159 aa15.58■□□□□ 0.08
COMMD3-BMI1-206ENST00000602395 PLSCR2Q9NRY7 297 aa15.57■□□□□ 0.08
COMMD3-BMI1-206ENST00000602395 HOXB3P14651 431 aaPredicted RBP15.56■□□□□ 0.08
COMMD3-BMI1-206ENST00000602395 MARVELD3Q96A59 401 aa15.54■□□□□ 0.08
COMMD3-BMI1-206ENST00000602395 CDAN1Q8IWY9 1227 aa15.53■□□□□ 0.08
COMMD3-BMI1-206ENST00000602395 HS6ST3Q8IZP7 471 aa15.49■□□□□ 0.07
COMMD3-BMI1-206ENST00000602395 DOK7Q18PE1 504 aa15.45■□□□□ 0.06
COMMD3-BMI1-206ENST00000602395 EMP3P54852 163 aa15.44■□□□□ 0.06
COMMD3-BMI1-206ENST00000602395 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
COMMD3-BMI1-206ENST00000602395 ZNF710Q8N1W2 664 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms