RNA–Protein interactions for RNA: ENST00000601453.2

ATM-225, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-225ENST00000601453 RASEFQ8IZ41 740 aa14.07□□□□□ -0.16
ATM-225ENST00000601453 ZBTB47Q9UFB7 747 aaPredicted RBP14.05□□□□□ -0.16
ATM-225ENST00000601453 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
ATM-225ENST00000601453 KIF12Q96FN5 646 aa14.04□□□□□ -0.16
ATM-225ENST00000601453 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
ATM-225ENST00000601453 ATMINO43313 823 aaPredicted RBP14□□□□□ -0.17
ATM-225ENST00000601453 NUBP1P53384 320 aa13.98□□□□□ -0.17
ATM-225ENST00000601453 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
ATM-225ENST00000601453 MAP3K13O43283 966 aa13.95□□□□□ -0.18
ATM-225ENST00000601453 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
ATM-225ENST00000601453 SLC39A7Q92504 469 aa13.92□□□□□ -0.18
ATM-225ENST00000601453 C7P10643 843 aa13.91□□□□□ -0.18
ATM-225ENST00000601453 METRNQ9UJH8 293 aa13.91□□□□□ -0.18
ATM-225ENST00000601453 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
ATM-225ENST00000601453 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
ATM-225ENST00000601453 TRPC6Q9Y210 931 aa13.88□□□□□ -0.19
ATM-225ENST00000601453 TIE1P35590 1138 aa13.87□□□□□ -0.19
ATM-225ENST00000601453 FAM212AQ96EL1 285 aa13.87□□□□□ -0.19
ATM-225ENST00000601453 SGIP1Q9BQI5 828 aa13.87□□□□□ -0.19
ATM-225ENST00000601453 BMP2KQ9NSY1 1161 aaPredicted RBP13.87□□□□□ -0.19
ATM-225ENST00000601453 PCDHB13Q9Y5F0 798 aa13.82□□□□□ -0.2
ATM-225ENST00000601453 TTLL13PA6NNM8 815 aa13.77□□□□□ -0.21
ATM-225ENST00000601453 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
ATM-225ENST00000601453 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
ATM-225ENST00000601453 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
ATM-225ENST00000601453 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
ATM-225ENST00000601453 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
ATM-225ENST00000601453 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
ATM-225ENST00000601453 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
ATM-225ENST00000601453 TRIM35Q9UPQ4 493 aa13.68□□□□□ -0.22
ATM-225ENST00000601453 PYGBP11216 843 aa13.66□□□□□ -0.22
ATM-225ENST00000601453 IER5LQ5T953 404 aa13.66□□□□□ -0.22
ATM-225ENST00000601453 TMEM106CQ9BVX2 250 aa13.63□□□□□ -0.23
ATM-225ENST00000601453 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
ATM-225ENST00000601453 SEC24BO95487 1268 aa13.62□□□□□ -0.23
ATM-225ENST00000601453 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
ATM-225ENST00000601453 GSE1Q14687 1217 aa13.61□□□□□ -0.23
ATM-225ENST00000601453 PCDHB8Q9UN66 801 aa13.55□□□□□ -0.24
ATM-225ENST00000601453 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
ATM-225ENST00000601453 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.25
ATM-225ENST00000601453 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
ATM-225ENST00000601453 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
ATM-225ENST00000601453 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
ATM-225ENST00000601453 PLCG2P16885 1265 aa13.48□□□□□ -0.25
ATM-225ENST00000601453 POTEMA6NI47 508 aa13.46□□□□□ -0.25
ATM-225ENST00000601453 OCEL1Q9H607 264 aa13.43□□□□□ -0.26
ATM-225ENST00000601453 POTEGQ6S5H5 508 aa13.42□□□□□ -0.26
ATM-225ENST00000601453 LCE2DQ5TA82 110 aaPredicted RBP13.39□□□□□ -0.27
ATM-225ENST00000601453 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
ATM-225ENST00000601453 CIZ1Q9ULV3 898 aaPredicted RBP13.39□□□□□ -0.27
ATM-225ENST00000601453 PSEN1P49768 467 aa13.37□□□□□ -0.27
ATM-225ENST00000601453 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
ATM-225ENST00000601453 SLAIN1Q8ND83 568 aa13.33□□□□□ -0.28
ATM-225ENST00000601453 MKRN3Q13064 507 aaKnown RBP13.32□□□□□ -0.28
ATM-225ENST00000601453 PDAP1Q13442 181 aaKnown RBP13.32□□□□□ -0.28
ATM-225ENST00000601453 PDCD7Q8N8D1 485 aaKnown RBP13.29□□□□□ -0.28
ATM-225ENST00000601453 PLSCR2Q9NRY7 297 aa13.29□□□□□ -0.28
ATM-225ENST00000601453 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
ATM-225ENST00000601453 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
ATM-225ENST00000601453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.24□□□□□ -0.295e-8■■■■□ 20.7
ATM-225ENST00000601453 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.24□□□□□ -0.29
ATM-225ENST00000601453 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
ATM-225ENST00000601453 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.29
ATM-225ENST00000601453 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
ATM-225ENST00000601453 ST18O60284 1047 aa13.16□□□□□ -0.3
ATM-225ENST00000601453 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
ATM-225ENST00000601453 SNPHO15079 494 aa13.13□□□□□ -0.31
ATM-225ENST00000601453 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
ATM-225ENST00000601453 TMEM121BQ9BXQ6 578 aaPredicted RBP13.08□□□□□ -0.32
ATM-225ENST00000601453 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
ATM-225ENST00000601453 RNF25Q96BH1 459 aaPredicted RBP13.06□□□□□ -0.32
ATM-225ENST00000601453 CDAN1Q8IWY9 1227 aa13.04□□□□□ -0.32
ATM-225ENST00000601453 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
ATM-225ENST00000601453 BOLA1Q9Y3E2 137 aa13.04□□□□□ -0.32
ATM-225ENST00000601453 G3V3G9 751 aa13.02□□□□□ -0.33
ATM-225ENST00000601453 VGFO15240 615 aaPredicted RBP13.01□□□□□ -0.33
ATM-225ENST00000601453 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.98□□□□□ -0.33
ATM-225ENST00000601453 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
ATM-225ENST00000601453 SOX12O15370 315 aa12.95□□□□□ -0.34
ATM-225ENST00000601453 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
ATM-225ENST00000601453 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
ATM-225ENST00000601453 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
ATM-225ENST00000601453 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
ATM-225ENST00000601453 EMP3P54852 163 aa12.86□□□□□ -0.35
ATM-225ENST00000601453 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
ATM-225ENST00000601453 HOXB3P14651 431 aaPredicted RBP12.85□□□□□ -0.35
ATM-225ENST00000601453 BCL11BQ9C0K0 894 aaPredicted RBP12.84□□□□□ -0.35
ATM-225ENST00000601453 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
ATM-225ENST00000601453 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
ATM-225ENST00000601453 NLRP6P59044 892 aa12.79□□□□□ -0.36
ATM-225ENST00000601453 TMEM92Q6UXU6 159 aa12.79□□□□□ -0.36
ATM-225ENST00000601453 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
ATM-225ENST00000601453 PKD2Q13563 968 aa12.78□□□□□ -0.36
ATM-225ENST00000601453 FBXO22Q8NEZ5 403 aa12.78□□□□□ -0.36
ATM-225ENST00000601453 HS3ST6Q96QI5 342 aa12.78□□□□□ -0.36
ATM-225ENST00000601453 FAM205CA6NFA0 338 aa12.77□□□□□ -0.37
ATM-225ENST00000601453 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
ATM-225ENST00000601453 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
ATM-225ENST00000601453 STK25O00506 426 aa12.76□□□□□ -0.37
ATM-225ENST00000601453 HOXB1P14653 301 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms