RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 BECN1Q14457 450 aa15.66■□□□□ 0.1
SCN8A-208ENST00000599343 DDRGK1Q96HY6 314 aa15.65■□□□□ 0.1
SCN8A-208ENST00000599343 PTMAP06454 111 aaKnown RBP15.59■□□□□ 0.09
SCN8A-208ENST00000599343 GOLGA6L22H0YM25 854 aa15.59■□□□□ 0.09
SCN8A-208ENST00000599343 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.09
SCN8A-208ENST00000599343 DCAF1Q9Y4B6 1507 aa15.57■□□□□ 0.08
SCN8A-208ENST00000599343 RTN4Q9NQC3 1192 aaKnown RBP15.57■□□□□ 0.08
SCN8A-208ENST00000599343 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
SCN8A-208ENST00000599343 DNTTIP2Q5QJE6 756 aaKnown RBP15.56■□□□□ 0.08
SCN8A-208ENST00000599343 EIF4G2P78344 907 aaKnown RBP eCLIP15.55■□□□□ 0.08
SCN8A-208ENST00000599343 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
SCN8A-208ENST00000599343 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
SCN8A-208ENST00000599343 TNNT2P45379 298 aaPredicted RBP15.53■□□□□ 0.08
SCN8A-208ENST00000599343 ANP32EQ9BTT0 268 aa15.53■□□□□ 0.08
SCN8A-208ENST00000599343 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
SCN8A-208ENST00000599343 TULP1O00294 542 aaPredicted RBP15.52■□□□□ 0.08
SCN8A-208ENST00000599343 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.07
SCN8A-208ENST00000599343 ZRSR1Q15695 479 aaKnown RBP15.51■□□□□ 0.07
SCN8A-208ENST00000599343 NAP1L5Q96NT1 182 aaPredicted RBP15.51■□□□□ 0.07
SCN8A-208ENST00000599343 SUPT16HQ9Y5B9 1047 aaKnown RBP15.5■□□□□ 0.07
SCN8A-208ENST00000599343 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
SCN8A-208ENST00000599343 TAOK2Q9UL54 1235 aa15.48■□□□□ 0.07
SCN8A-208ENST00000599343 PLCB2Q00722 1185 aa15.46■□□□□ 0.06
SCN8A-208ENST00000599343 CASC1Q6TDU7 716 aa15.46■□□□□ 0.06
SCN8A-208ENST00000599343 RGL3Q3MIN7 710 aa15.45■□□□□ 0.06
SCN8A-208ENST00000599343 FTSJ3Q8IY81 847 aaKnown RBP15.45■□□□□ 0.06
SCN8A-208ENST00000599343 PPM1GO15355 546 aaPredicted RBP15.45■□□□□ 0.06
SCN8A-208ENST00000599343 PPP1R15AO75807 674 aaPredicted RBP15.44■□□□□ 0.06
SCN8A-208ENST00000599343 NEUROD2Q15784 382 aa15.43■□□□□ 0.06
SCN8A-208ENST00000599343 RGS3P49796 1198 aa15.43■□□□□ 0.06
SCN8A-208ENST00000599343 ERICH6BQ5W0A0 696 aa15.42■□□□□ 0.06
SCN8A-208ENST00000599343 CFAP53Q96M91 514 aa15.41■□□□□ 0.06
SCN8A-208ENST00000599343 KNSTRNQ9Y448 316 aa15.38■□□□□ 0.05
SCN8A-208ENST00000599343 NOP58Q9Y2X3 529 aaKnown RBP15.38■□□□□ 0.05
SCN8A-208ENST00000599343 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
SCN8A-208ENST00000599343 FRAT1Q92837 279 aaPredicted RBP15.37■□□□□ 0.05
SCN8A-208ENST00000599343 HSP90AB1P08238 724 aaKnown RBP15.36■□□□□ 0.05
SCN8A-208ENST00000599343 KCNH8Q96L42 1107 aa15.36■□□□□ 0.05
SCN8A-208ENST00000599343 CLIP1P30622 1438 aa15.34■□□□□ 0.05
SCN8A-208ENST00000599343 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
SCN8A-208ENST00000599343 PPP4R2Q9NY27 417 aa15.33■□□□□ 0.04
SCN8A-208ENST00000599343 MAPK8IP3Q9UPT6 1336 aa15.32■□□□□ 0.04
SCN8A-208ENST00000599343 CARD11Q9BXL7 1154 aa15.32■□□□□ 0.04
SCN8A-208ENST00000599343 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
SCN8A-208ENST00000599343 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
SCN8A-208ENST00000599343 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
SCN8A-208ENST00000599343 GOLGA6L6A8MZA4 724 aa15.29■□□□□ 0.04
SCN8A-208ENST00000599343 AMER1Q5JTC6 1135 aaPredicted RBP15.29■□□□□ 0.04
SCN8A-208ENST00000599343 CC2D1BQ5T0F9 858 aaKnown RBP15.29■□□□□ 0.04
SCN8A-208ENST00000599343 FGD1P98174 961 aa15.29■□□□□ 0.04
SCN8A-208ENST00000599343 OS9Q13438 667 aaPredicted RBP15.29■□□□□ 0.04
SCN8A-208ENST00000599343 SPRYD3Q8NCJ5 442 aa15.28■□□□□ 0.04
SCN8A-208ENST00000599343 CDCA8Q53HL2 280 aa15.27■□□□□ 0.04
SCN8A-208ENST00000599343 KCNJ4P48050 445 aa15.26■□□□□ 0.03
SCN8A-208ENST00000599343 ARID4BQ4LE39 1312 aaPredicted RBP15.25■□□□□ 0.03
SCN8A-208ENST00000599343 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
SCN8A-208ENST00000599343 LMOD2Q6P5Q4 547 aa15.24■□□□□ 0.03
SCN8A-208ENST00000599343 NUDCQ9Y266 331 aa15.24■□□□□ 0.03
SCN8A-208ENST00000599343 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
SCN8A-208ENST00000599343 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
SCN8A-208ENST00000599343 HSCBQ8IWL3 235 aa15.22■□□□□ 0.03
SCN8A-208ENST00000599343 DEKP35659 375 aaKnown RBP15.21■□□□□ 0.03
SCN8A-208ENST00000599343 NPHP1O15259 732 aa15.21■□□□□ 0.03
SCN8A-208ENST00000599343 PLEKHD1A6NEE1 506 aa15.21■□□□□ 0.03
SCN8A-208ENST00000599343 GOLGA6L4A6NEF3 574 aa15.21■□□□□ 0.02
SCN8A-208ENST00000599343 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.02
SCN8A-208ENST00000599343 MSNP26038 577 aaKnown RBP15.2■□□□□ 0.02
SCN8A-208ENST00000599343 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
SCN8A-208ENST00000599343 NRDCO43847 1150 aa15.19■□□□□ 0.02
SCN8A-208ENST00000599343 POGKQ9P215 609 aa15.19■□□□□ 0.02
SCN8A-208ENST00000599343 DRC7Q8IY82 874 aa15.18■□□□□ 0.02
SCN8A-208ENST00000599343 CEP162Q5TB80 1403 aa15.18■□□□□ 0.02
SCN8A-208ENST00000599343 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
SCN8A-208ENST00000599343 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
SCN8A-208ENST00000599343 MYO15BQ96JP2 1530 aa15.15■□□□□ 0.02
SCN8A-208ENST00000599343 CHMP4BQ9H444 224 aaKnown RBP15.15■□□□□ 0.02
SCN8A-208ENST00000599343 L1TD1Q5T7N2 865 aaKnown RBP15.15■□□□□ 0.02
SCN8A-208ENST00000599343 ARID3AQ99856 593 aa15.15■□□□□ 0.02
SCN8A-208ENST00000599343 CLSTN1O94985 981 aa15.15■□□□□ 0.02
SCN8A-208ENST00000599343 MS4A1P11836 297 aa15.14■□□□□ 0.01
SCN8A-208ENST00000599343 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
SCN8A-208ENST00000599343 GOLGA3Q08378 1498 aa15.14■□□□□ 0.01
SCN8A-208ENST00000599343 SOX12O15370 315 aa15.12■□□□□ 0.01
SCN8A-208ENST00000599343 MCCP23508 829 aa15.1■□□□□ 0.01
SCN8A-208ENST00000599343 APBB1O00213 710 aa15.1■□□□□ 0.01
SCN8A-208ENST00000599343 RBM19Q9Y4C8 960 aaKnown RBP15.09■□□□□ 0.01
SCN8A-208ENST00000599343 GZF1Q9H116 711 aaPredicted RBP15.09■□□□□ 0.01
SCN8A-208ENST00000599343 PNNQ9H307 717 aaKnown RBP15.07■□□□□ 0
SCN8A-208ENST00000599343 ISY1Q9ULR0 285 aaKnown RBP15.07■□□□□ 0
SCN8A-208ENST00000599343 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
SCN8A-208ENST00000599343 TMF1P82094 1093 aa15.05■□□□□ 0
SCN8A-208ENST00000599343 GNL2Q13823 731 aaKnown RBP15.05■□□□□ -0
SCN8A-208ENST00000599343 DCAF11Q8TEB1 546 aa15.05■□□□□ -0
SCN8A-208ENST00000599343 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.05■□□□□ -0
SCN8A-208ENST00000599343 SLKQ9H2G2 1235 aaPredicted RBP15.03■□□□□ -0
SCN8A-208ENST00000599343 SAFB2Q14151 953 aaKnown RBP eCLIP15.03■□□□□ -0
SCN8A-208ENST00000599343 MORC1Q86VD1 984 aa15.02■□□□□ -0
SCN8A-208ENST00000599343 SRPK2P78362 688 aaKnown RBP15.01□□□□□ -0.01
SCN8A-208ENST00000599343 EEA1Q15075 1411 aa15.01□□□□□ -0.01
SCN8A-208ENST00000599343 GBP4Q96PP9 640 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms