RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CD44P16070 742 aaKnown RBP9.35□□□□□ -0.91
VMP1-212ENST00000591782 PYGBP11216 843 aa9.34□□□□□ -0.91
VMP1-212ENST00000591782 C19orf67A6NJJ6 358 aa9.33□□□□□ -0.92
VMP1-212ENST00000591782 RGL2O15211 777 aa9.33□□□□□ -0.92
VMP1-212ENST00000591782 CCDC61Q9Y6R9 512 aa9.33□□□□□ -0.92
VMP1-212ENST00000591782 POTEHQ6S545 545 aa9.32□□□□□ -0.92
VMP1-212ENST00000591782 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
VMP1-212ENST00000591782 DCAF8L2P0C7V8 631 aa9.3□□□□□ -0.92
VMP1-212ENST00000591782 HAX1O00165 279 aa9.29□□□□□ -0.92
VMP1-212ENST00000591782 CHRM1P11229 460 aaPredicted RBP9.29□□□□□ -0.92
VMP1-212ENST00000591782 RNF25Q96BH1 459 aaPredicted RBP9.29□□□□□ -0.92
VMP1-212ENST00000591782 EVX2Q03828 476 aa9.25□□□□□ -0.93
VMP1-212ENST00000591782 PHF12Q96QT6 1004 aa9.25□□□□□ -0.93
VMP1-212ENST00000591782 RIOK3O14730 519 aaKnown RBP9.23□□□□□ -0.93
VMP1-212ENST00000591782 ZNF579Q8NAF0 562 aaKnown RBP9.23□□□□□ -0.93
VMP1-212ENST00000591782 KIF12Q96FN5 646 aa9.23□□□□□ -0.93
VMP1-212ENST00000591782 MAP3K13O43283 966 aa9.21□□□□□ -0.94
VMP1-212ENST00000591782 PCDHB13Q9Y5F0 798 aa9.2□□□□□ -0.94
VMP1-212ENST00000591782 ZNF467Q7Z7K2 595 aaPredicted RBP9.19□□□□□ -0.94
VMP1-212ENST00000591782 PCDHB8Q9UN66 801 aa9.19□□□□□ -0.94
VMP1-212ENST00000591782 IFNL1Q8IU54 200 aa9.18□□□□□ -0.94
VMP1-212ENST00000591782 SGIP1Q9BQI5 828 aa9.17□□□□□ -0.94
VMP1-212ENST00000591782 VGFO15240 615 aaPredicted RBP9.16□□□□□ -0.94
VMP1-212ENST00000591782 CHGAP10645 457 aaKnown RBP9.15□□□□□ -0.94
VMP1-212ENST00000591782 TAOK2Q9UL54 1235 aa9.15□□□□□ -0.94
VMP1-212ENST00000591782 MS4A3Q96HJ5 214 aa9.14□□□□□ -0.95
VMP1-212ENST00000591782 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
VMP1-212ENST00000591782 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
VMP1-212ENST00000591782 PDAP1Q13442 181 aaKnown RBP9.12□□□□□ -0.95
VMP1-212ENST00000591782 STK25O00506 426 aa9.11□□□□□ -0.95
VMP1-212ENST00000591782 HS6ST3Q8IZP7 471 aa9.11□□□□□ -0.95
VMP1-212ENST00000591782 GALR2O43603 387 aaPredicted RBP9.1□□□□□ -0.95
VMP1-212ENST00000591782 PSEN1P49768 467 aa9.1□□□□□ -0.95
VMP1-212ENST00000591782 BCL11BQ9C0K0 894 aaPredicted RBP9.09□□□□□ -0.95
VMP1-212ENST00000591782 TRPC6Q9Y210 931 aa9.09□□□□□ -0.95
VMP1-212ENST00000591782 STK24Q9Y6E0 443 aa9.07□□□□□ -0.96
VMP1-212ENST00000591782 CLCN6P51797 869 aa9.06□□□□□ -0.96
VMP1-212ENST00000591782 BBXQ8WY36 941 aaPredicted RBP9.06□□□□□ -0.96
VMP1-212ENST00000591782 GABBR2O75899 941 aa9.05□□□□□ -0.96
VMP1-212ENST00000591782 TMEM106CQ9BVX2 250 aa9.02□□□□□ -0.97
VMP1-212ENST00000591782 DNAJC5Q9H3Z4 198 aa9.02□□□□□ -0.97
VMP1-212ENST00000591782 TIE1P35590 1138 aa9.01□□□□□ -0.97
VMP1-212ENST00000591782 SP7Q8TDD2 431 aaPredicted RBP9.01□□□□□ -0.97
VMP1-212ENST00000591782 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.01□□□□□ -0.97
VMP1-212ENST00000591782 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
VMP1-212ENST00000591782 CABP2Q9NPB3 220 aa9□□□□□ -0.97
VMP1-212ENST00000591782 BMP2KQ9NSY1 1161 aaPredicted RBP9□□□□□ -0.97
VMP1-212ENST00000591782 TTLL13PA6NNM8 815 aa8.99□□□□□ -0.97
VMP1-212ENST00000591782 PLCB2Q00722 1185 aa8.97□□□□□ -0.97
VMP1-212ENST00000591782 PAXIP1Q6ZW49 1069 aaPredicted RBP8.96□□□□□ -0.98
VMP1-212ENST00000591782 EFCAB3Q8N7B9 438 aa8.96□□□□□ -0.98
VMP1-212ENST00000591782 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
VMP1-212ENST00000591782 ATN1P54259 1190 aaPredicted RBP8.94□□□□□ -0.98
VMP1-212ENST00000591782 GOLGA2Q08379 1002 aa8.94□□□□□ -0.98
VMP1-212ENST00000591782 TRIM35Q9UPQ4 493 aa8.94□□□□□ -0.98
VMP1-212ENST00000591782 ATMINO43313 823 aaPredicted RBP8.93□□□□□ -0.98
VMP1-212ENST00000591782 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
VMP1-212ENST00000591782 SPRYD3Q8NCJ5 442 aa8.93□□□□□ -0.98
VMP1-212ENST00000591782 DCBLD2Q96PD2 775 aa8.92□□□□□ -0.98
VMP1-212ENST00000591782 GTPBP6O43824 516 aaPredicted RBP8.91□□□□□ -0.98
VMP1-212ENST00000591782 MFRPQ9BY79 579 aa8.91□□□□□ -0.98
VMP1-212ENST00000591782 MKRN3Q13064 507 aaKnown RBP8.9□□□□□ -0.98
VMP1-212ENST00000591782 SOX12O15370 315 aa8.89□□□□□ -0.99
VMP1-212ENST00000591782 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
VMP1-212ENST00000591782 POTEIP0CG38 1075 aa8.87□□□□□ -0.99
VMP1-212ENST00000591782 PELP1Q8IZL8 1130 aaKnown RBP8.87□□□□□ -0.99
VMP1-212ENST00000591782 FBXO22Q8NEZ5 403 aa8.87□□□□□ -0.99
VMP1-212ENST00000591782 SLC24A1O60721 1099 aa8.86□□□□□ -0.99
VMP1-212ENST00000591782 NLRP6P59044 892 aa8.86□□□□□ -0.99
VMP1-212ENST00000591782 RYDENQ9NUL5 291 aaKnown RBP8.86□□□□□ -0.99
VMP1-212ENST00000591782 HAP1P54257 671 aaPredicted RBP8.85□□□□□ -0.99
VMP1-212ENST00000591782 MS4A4AQ96JQ5 239 aa8.83□□□□□ -1
VMP1-212ENST00000591782 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.83□□□□□ -12e-48■□□□□ 10.3
VMP1-212ENST00000591782 IER5LQ5T953 404 aa8.82□□□□□ -1
VMP1-212ENST00000591782 ILDR1Q86SU0 546 aaPredicted RBP8.82□□□□□ -1
VMP1-212ENST00000591782 PPP1R37O75864 691 aa8.81□□□□□ -1
VMP1-212ENST00000591782 IRX5P78411 483 aaPredicted RBP8.81□□□□□ -1
VMP1-212ENST00000591782 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
VMP1-212ENST00000591782 PDCD7Q8N8D1 485 aaKnown RBP8.79□□□□□ -1
VMP1-212ENST00000591782 SLC39A7Q92504 469 aa8.79□□□□□ -1
VMP1-212ENST00000591782 DPY19L2Q6NUT2 758 aa8.77□□□□□ -1.01
VMP1-212ENST00000591782 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
VMP1-212ENST00000591782 METRNQ9UJH8 293 aa8.77□□□□□ -1.01
VMP1-212ENST00000591782 SEC24BO95487 1268 aa8.76□□□□□ -1.01
VMP1-212ENST00000591782 C7P10643 843 aa8.76□□□□□ -1.01
VMP1-212ENST00000591782 PLCG2P16885 1265 aa8.76□□□□□ -1.01
VMP1-212ENST00000591782 COLQQ9Y215 455 aaPredicted RBP8.76□□□□□ -1.01
VMP1-212ENST00000591782 POTEFA5A3E0 1075 aa8.75□□□□□ -1.01
VMP1-212ENST00000591782 CADPS2Q86UW7 1296 aa8.7□□□□□ -1.02
VMP1-212ENST00000591782 MICALL2Q8IY33 904 aa8.68□□□□□ -1.02
VMP1-212ENST00000591782 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
VMP1-212ENST00000591782 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
VMP1-212ENST00000591782 BOLA1Q9Y3E2 137 aa8.68□□□□□ -1.02
VMP1-212ENST00000591782 L3MBTL3Q96JM7 780 aaPredicted RBP8.66□□□□□ -1.02
VMP1-212ENST00000591782 G3V3G9 751 aa8.65□□□□□ -1.02
VMP1-212ENST00000591782 TMEM121BQ9BXQ6 578 aaPredicted RBP8.65□□□□□ -1.02
VMP1-212ENST00000591782 NCKAP5LQ9HCH0 1330 aa8.61□□□□□ -1.03
VMP1-212ENST00000591782 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
VMP1-212ENST00000591782 CRISPLD2Q9H0B8 497 aa8.59□□□□□ -1.03
VMP1-212ENST00000591782 POTEJP0CG39 1038 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms