RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CCDC58P3-201ENST00000590792 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
CCDC58P3-201ENST00000590792 GSE1Q14687 1217 aa12.97□□□□□ -0.33
CCDC58P3-201ENST00000590792 ZRANB1Q9UGI0 708 aa12.97□□□□□ -0.33
CCDC58P3-201ENST00000590792 GABBR2O75899 941 aa12.95□□□□□ -0.34
CCDC58P3-201ENST00000590792 CLCN6P51797 869 aa12.95□□□□□ -0.34
CCDC58P3-201ENST00000590792 PKD2Q13563 968 aa12.94□□□□□ -0.34
CCDC58P3-201ENST00000590792 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
CCDC58P3-201ENST00000590792 PYGBP11216 843 aa12.88□□□□□ -0.35
CCDC58P3-201ENST00000590792 PHF12Q96QT6 1004 aa12.87□□□□□ -0.35
CCDC58P3-201ENST00000590792 ECM2O94769 699 aaPredicted RBP12.86□□□□□ -0.35
CCDC58P3-201ENST00000590792 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
CCDC58P3-201ENST00000590792 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
CCDC58P3-201ENST00000590792 KIF12Q96FN5 646 aa12.78□□□□□ -0.36
CCDC58P3-201ENST00000590792 MAP3K13O43283 966 aa12.77□□□□□ -0.37
CCDC58P3-201ENST00000590792 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
CCDC58P3-201ENST00000590792 RGL2O15211 777 aa12.75□□□□□ -0.37
CCDC58P3-201ENST00000590792 RNF25Q96BH1 459 aaPredicted RBP12.74□□□□□ -0.37
CCDC58P3-201ENST00000590792 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
CCDC58P3-201ENST00000590792 MS4A3Q96HJ5 214 aa12.71□□□□□ -0.37
CCDC58P3-201ENST00000590792 PCDHB8Q9UN66 801 aa12.7□□□□□ -0.38
CCDC58P3-201ENST00000590792 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
CCDC58P3-201ENST00000590792 GALR2O43603 387 aaPredicted RBP12.68□□□□□ -0.38
CCDC58P3-201ENST00000590792 DCAF8L2P0C7V8 631 aa12.67□□□□□ -0.38
CCDC58P3-201ENST00000590792 RIOK3O14730 519 aaKnown RBP12.66□□□□□ -0.38
CCDC58P3-201ENST00000590792 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
CCDC58P3-201ENST00000590792 SGIP1Q9BQI5 828 aa12.66□□□□□ -0.38
CCDC58P3-201ENST00000590792 POTEIP0CG38 1075 aa12.65□□□□□ -0.38
CCDC58P3-201ENST00000590792 DCBLD2Q96PD2 775 aa12.64□□□□□ -0.39
CCDC58P3-201ENST00000590792 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
CCDC58P3-201ENST00000590792 VGFO15240 615 aaPredicted RBP12.58□□□□□ -0.4
CCDC58P3-201ENST00000590792 LHX8Q68G74 356 aa12.58□□□□□ -0.4
CCDC58P3-201ENST00000590792 PDAP1Q13442 181 aaKnown RBP12.56□□□□□ -0.4
CCDC58P3-201ENST00000590792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.55□□□□□ -0.4
CCDC58P3-201ENST00000590792 PSEN1P49768 467 aa12.55□□□□□ -0.4
CCDC58P3-201ENST00000590792 ZFP91Q96JP5 570 aaPredicted RBP12.55□□□□□ -0.4
CCDC58P3-201ENST00000590792 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
CCDC58P3-201ENST00000590792 TMEM106CQ9BVX2 250 aa12.51□□□□□ -0.41
CCDC58P3-201ENST00000590792 STK25O00506 426 aa12.5□□□□□ -0.41
CCDC58P3-201ENST00000590792 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
CCDC58P3-201ENST00000590792 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
CCDC58P3-201ENST00000590792 TIE1P35590 1138 aa12.49□□□□□ -0.41
CCDC58P3-201ENST00000590792 TTLL13PA6NNM8 815 aa12.48□□□□□ -0.41
CCDC58P3-201ENST00000590792 BCL11BQ9C0K0 894 aaPredicted RBP12.48□□□□□ -0.41
CCDC58P3-201ENST00000590792 STK24Q9Y6E0 443 aa12.46□□□□□ -0.41
CCDC58P3-201ENST00000590792 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
CCDC58P3-201ENST00000590792 ATMINO43313 823 aaPredicted RBP12.43□□□□□ -0.42
CCDC58P3-201ENST00000590792 ATN1P54259 1190 aaPredicted RBP12.42□□□□□ -0.42
CCDC58P3-201ENST00000590792 ASTLQ6HA08 431 aaPredicted RBP12.42□□□□□ -0.42
CCDC58P3-201ENST00000590792 CABP2Q9NPB3 220 aa12.42□□□□□ -0.42
CCDC58P3-201ENST00000590792 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
CCDC58P3-201ENST00000590792 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
CCDC58P3-201ENST00000590792 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
CCDC58P3-201ENST00000590792 EFCAB3Q8N7B9 438 aa12.35□□□□□ -0.43
CCDC58P3-201ENST00000590792 SLC39A7Q92504 469 aa12.32□□□□□ -0.44
CCDC58P3-201ENST00000590792 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
CCDC58P3-201ENST00000590792 C7P10643 843 aa12.29□□□□□ -0.44
CCDC58P3-201ENST00000590792 NKX1-1Q15270 411 aaPredicted RBP12.29□□□□□ -0.44
CCDC58P3-201ENST00000590792 BBXQ8WY36 941 aaPredicted RBP12.29□□□□□ -0.44
CCDC58P3-201ENST00000590792 METRNQ9UJH8 293 aa12.28□□□□□ -0.44
CCDC58P3-201ENST00000590792 DNAJC5Q9H3Z4 198 aa12.27□□□□□ -0.45
CCDC58P3-201ENST00000590792 IER5LQ5T953 404 aa12.24□□□□□ -0.45
CCDC58P3-201ENST00000590792 MFRPQ9BY79 579 aa12.24□□□□□ -0.45
CCDC58P3-201ENST00000590792 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
CCDC58P3-201ENST00000590792 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
CCDC58P3-201ENST00000590792 SOX12O15370 315 aa12.22□□□□□ -0.45
CCDC58P3-201ENST00000590792 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC58P3-201ENST00000590792 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.22□□□□□ -0.45
CCDC58P3-201ENST00000590792 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
CCDC58P3-201ENST00000590792 SEC24BO95487 1268 aa12.19□□□□□ -0.46
CCDC58P3-201ENST00000590792 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
CCDC58P3-201ENST00000590792 COLQQ9Y215 455 aaPredicted RBP12.19□□□□□ -0.46
CCDC58P3-201ENST00000590792 PLCG2P16885 1265 aa12.18□□□□□ -0.46
CCDC58P3-201ENST00000590792 NLRP6P59044 892 aa12.18□□□□□ -0.46
CCDC58P3-201ENST00000590792 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
CCDC58P3-201ENST00000590792 POTEFA5A3E0 1075 aa12.16□□□□□ -0.46
CCDC58P3-201ENST00000590792 GTPBP6O43824 516 aaPredicted RBP12.16□□□□□ -0.46
CCDC58P3-201ENST00000590792 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
CCDC58P3-201ENST00000590792 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
CCDC58P3-201ENST00000590792 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
CCDC58P3-201ENST00000590792 OCEL1Q9H607 264 aa12.16□□□□□ -0.46
CCDC58P3-201ENST00000590792 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.46
CCDC58P3-201ENST00000590792 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
CCDC58P3-201ENST00000590792 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
CCDC58P3-201ENST00000590792 DPY19L2Q6NUT2 758 aa12.13□□□□□ -0.47
CCDC58P3-201ENST00000590792 SPRYD3Q8NCJ5 442 aa12.13□□□□□ -0.47
CCDC58P3-201ENST00000590792 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
CCDC58P3-201ENST00000590792 PPP1R37O75864 691 aa12.08□□□□□ -0.48
CCDC58P3-201ENST00000590792 PLCB2Q00722 1185 aa12.08□□□□□ -0.48
CCDC58P3-201ENST00000590792 POTEJP0CG39 1038 aa12.06□□□□□ -0.48
CCDC58P3-201ENST00000590792 SCUBE2Q9NQ36 999 aa12.05□□□□□ -0.48
CCDC58P3-201ENST00000590792 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
CCDC58P3-201ENST00000590792 G3V3G9 751 aa11.99□□□□□ -0.49
CCDC58P3-201ENST00000590792 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
CCDC58P3-201ENST00000590792 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
CCDC58P3-201ENST00000590792 HAP1P54257 671 aaPredicted RBP11.93□□□□□ -0.5
CCDC58P3-201ENST00000590792 TMEM121BQ9BXQ6 578 aaPredicted RBP11.93□□□□□ -0.5
CCDC58P3-201ENST00000590792 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
CCDC58P3-201ENST00000590792 TSHZ2Q9NRE2 1034 aa11.92□□□□□ -0.5
CCDC58P3-201ENST00000590792 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms