RNA–Protein interactions for RNA: ENST00000590608.1

ATP9B-223, Transcript of ATPase phospholipid transporting 9B (putative), human

TSL 3

Gene ATP9B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP9B-223	ENST00000590608	PHF12	Q96QT6	1004 aa		11.56	□□□□□ -0.56
ATP9B-223	ENST00000590608	PAK3	O75914	559 aa	Predicted RBP	11.54	□□□□□ -0.56
ATP9B-223	ENST00000590608	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.54	□□□□□ -0.56
ATP9B-223	ENST00000590608	CCDC61	Q9Y6R9	512 aa		11.53	□□□□□ -0.56
ATP9B-223	ENST00000590608	KLHL34	Q8N239	644 aa		11.47	□□□□□ -0.57
ATP9B-223	ENST00000590608	GALR2	O43603	387 aa	Predicted RBP	11.46	□□□□□ -0.57
ATP9B-223	ENST00000590608	DCAF8L2	P0C7V8	631 aa		11.46	□□□□□ -0.57
ATP9B-223	ENST00000590608	SPOCK2	Q92563	424 aa		11.45	□□□□□ -0.58
ATP9B-223	ENST00000590608	PLCB2	Q00722	1185 aa		11.44	□□□□□ -0.58
ATP9B-223	ENST00000590608	CLCN6	P51797	869 aa		11.42	□□□□□ -0.58
ATP9B-223	ENST00000590608	FAM212A	Q96EL1	285 aa		11.42	□□□□□ -0.58
ATP9B-223	ENST00000590608	KIF12	Q96FN5	646 aa		11.41	□□□□□ -0.58
ATP9B-223	ENST00000590608	MS4A3	Q96HJ5	214 aa		11.41	□□□□□ -0.58
ATP9B-223	ENST00000590608	POTEI	P0CG38	1075 aa		11.4	□□□□□ -0.58
ATP9B-223	ENST00000590608	LHX8	Q68G74	356 aa		11.4	□□□□□ -0.58
ATP9B-223	ENST00000590608	PKD2	Q13563	968 aa		11.38	□□□□□ -0.59
ATP9B-223	ENST00000590608	MAP3K13	O43283	966 aa		11.36	□□□□□ -0.59
ATP9B-223	ENST00000590608	DCAF8	Q5TAQ9	597 aa		11.35	□□□□□ -0.59
ATP9B-223	ENST00000590608	HAP1	P54257	671 aa	Predicted RBP	11.34	□□□□□ -0.59
ATP9B-223	ENST00000590608	TRPC6	Q9Y210	931 aa		11.32	□□□□□ -0.6
ATP9B-223	ENST00000590608	PYGB	P11216	843 aa		11.29	□□□□□ -0.6
ATP9B-223	ENST00000590608	GSE1	Q14687	1217 aa		11.29	□□□□□ -0.6
ATP9B-223	ENST00000590608	DCBLD2	Q96PD2	775 aa		11.27	□□□□□ -0.61
ATP9B-223	ENST00000590608	PCDHB13	Q9Y5F0	798 aa		11.27	□□□□□ -0.61
ATP9B-223	ENST00000590608	IFNL1	Q8IU54	200 aa		11.26	□□□□□ -0.61
ATP9B-223	ENST00000590608	SGIP1	Q9BQI5	828 aa		11.25	□□□□□ -0.61
ATP9B-223	ENST00000590608	ASTL	Q6HA08	431 aa	Predicted RBP	11.23	□□□□□ -0.61
ATP9B-223	ENST00000590608	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.23	□□□□□ -0.61
ATP9B-223	ENST00000590608	PELP1	Q8IZL8	1130 aa	Known RBP	11.22	□□□□□ -0.61
ATP9B-223	ENST00000590608	ATMIN	O43313	823 aa	Predicted RBP	11.21	□□□□□ -0.61
ATP9B-223	ENST00000590608	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.21	□□□□□ -0.61
ATP9B-223	ENST00000590608	CHRM1	P11229	460 aa	Predicted RBP	11.2	□□□□□ -0.62
ATP9B-223	ENST00000590608	PCDHB8	Q9UN66	801 aa		11.19	□□□□□ -0.62
ATP9B-223	ENST00000590608	ECM2	O94769	699 aa	Predicted RBP	11.18	□□□□□ -0.62
ATP9B-223	ENST00000590608	TIE1	P35590	1138 aa		11.18	□□□□□ -0.62
ATP9B-223	ENST00000590608	ATN1	P54259	1190 aa	Predicted RBP	11.18	□□□□□ -0.62
ATP9B-223	ENST00000590608	TTLL13P	A6NNM8	815 aa		11.16	□□□□□ -0.62
ATP9B-223	ENST00000590608	TRIM41	Q8WV44	630 aa		11.14	□□□□□ -0.63
ATP9B-223	ENST00000590608	RGL2	O15211	777 aa		11.11	□□□□□ -0.63
ATP9B-223	ENST00000590608	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.11	□□□□□ -0.63
ATP9B-223	ENST00000590608	RNF25	Q96BH1	459 aa	Predicted RBP	11.1	□□□□□ -0.63
ATP9B-223	ENST00000590608	TMEM106C	Q9BVX2	250 aa		11.09	□□□□□ -0.63
ATP9B-223	ENST00000590608	METRN	Q9UJH8	293 aa		11.07	□□□□□ -0.64
ATP9B-223	ENST00000590608	TRIM35	Q9UPQ4	493 aa		11.07	□□□□□ -0.64
ATP9B-223	ENST00000590608	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.06	□□□□□ -0.64
ATP9B-223	ENST00000590608	BBX	Q8WY36	941 aa	Predicted RBP	11.06	□□□□□ -0.64
ATP9B-223	ENST00000590608	VSIG10	Q8N0Z9	540 aa		11.05	□□□□□ -0.64
ATP9B-223	ENST00000590608	SLC39A7	Q92504	469 aa		11.05	□□□□□ -0.64
ATP9B-223	ENST00000590608	CFAP44	Q96MT7	982 aa		11.05	□□□□□ -0.64
ATP9B-223	ENST00000590608	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.05	□□□□□ -0.64
ATP9B-223	ENST00000590608	POTEF	A5A3E0	1075 aa		11.04	□□□□□ -0.64
ATP9B-223	ENST00000590608	PRKCSH	P14314	528 aa	Predicted RBP	11.04	□□□□□ -0.64
ATP9B-223	ENST00000590608	POTEB2	H3BUK9	544 aa		11.03	□□□□□ -0.64
ATP9B-223	ENST00000590608	BCAN	Q96GW7	911 aa		11.03	□□□□□ -0.64
ATP9B-223	ENST00000590608	KDM2A	Q9Y2K7	1162 aa		11.03	□□□□□ -0.64
ATP9B-223	ENST00000590608	C7	P10643	843 aa		11.02	□□□□□ -0.65
ATP9B-223	ENST00000590608	PSEN1	P49768	467 aa		11.02	□□□□□ -0.65
ATP9B-223	ENST00000590608	PDAP1	Q13442	181 aa	Known RBP	11.01	□□□□□ -0.65
ATP9B-223	ENST00000590608	RIOK3	O14730	519 aa	Known RBP	10.98	□□□□□ -0.65
ATP9B-223	ENST00000590608	COLQ	Q9Y215	455 aa	Predicted RBP	10.98	□□□□□ -0.65
ATP9B-223	ENST00000590608	IER5L	Q5T953	404 aa		10.97	□□□□□ -0.65
ATP9B-223	ENST00000590608	POTEJ	P0CG39	1038 aa		10.96	□□□□□ -0.65
ATP9B-223	ENST00000590608	IRX5	P78411	483 aa	Predicted RBP	10.94	□□□□□ -0.66
ATP9B-223	ENST00000590608	TAOK2	Q9UL54	1235 aa		10.94	□□□□□ -0.66
ATP9B-223	ENST00000590608	CHGA	P10645	457 aa	Known RBP	10.92	□□□□□ -0.66
ATP9B-223	ENST00000590608	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.91	□□□□□ -0.66
ATP9B-223	ENST00000590608	ZFP91	Q96JP5	570 aa	Predicted RBP	10.91	□□□□□ -0.66
ATP9B-223	ENST00000590608	TSHZ2	Q9NRE2	1034 aa		10.91	□□□□□ -0.66
ATP9B-223	ENST00000590608	VGF	O15240	615 aa	Predicted RBP	10.9	□□□□□ -0.66
ATP9B-223	ENST00000590608	SPRYD3	Q8NCJ5	442 aa		10.9	□□□□□ -0.66
ATP9B-223	ENST00000590608	CABP2	Q9NPB3	220 aa		10.89	□□□□□ -0.67
ATP9B-223	ENST00000590608	SEC24B	O95487	1268 aa		10.88	□□□□□ -0.67
ATP9B-223	ENST00000590608	OTUD5	Q96G74	571 aa		10.88	□□□□□ -0.67
ATP9B-223	ENST00000590608	HS6ST3	Q8IZP7	471 aa		10.87	□□□□□ -0.67
ATP9B-223	ENST00000590608	PDCD7	Q8N8D1	485 aa	Known RBP	10.87	□□□□□ -0.67
ATP9B-223	ENST00000590608	PLCG2	P16885	1265 aa		10.85	□□□□□ -0.67
ATP9B-223	ENST00000590608	ILDR1	Q86SU0	546 aa	Predicted RBP	10.85	□□□□□ -0.67
ATP9B-223	ENST00000590608	GOLGA2	Q08379	1002 aa		10.84	□□□□□ -0.67
ATP9B-223	ENST00000590608	MKRN3	Q13064	507 aa	Known RBP	10.83	□□□□□ -0.68
ATP9B-223	ENST00000590608	TPRN	Q4KMQ1	711 aa		10.83	□□□□□ -0.68
ATP9B-223	ENST00000590608	DNAJC5	Q9H3Z4	198 aa		10.83	□□□□□ -0.68
ATP9B-223	ENST00000590608	OCEL1	Q9H607	264 aa		10.83	□□□□□ -0.68
ATP9B-223	ENST00000590608	POTEM	A6NI47	508 aa		10.82	□□□□□ -0.68
ATP9B-223	ENST00000590608	EFCAB3	Q8N7B9	438 aa		10.82	□□□□□ -0.68
ATP9B-223	ENST00000590608	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.8	□□□□□ -0.68
ATP9B-223	ENST00000590608	STK25	O00506	426 aa		10.79	□□□□□ -0.68
ATP9B-223	ENST00000590608	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.79	□□□□□ -0.68	1e-6	■■■■■ 29.5
ATP9B-223	ENST00000590608	STK24	Q9Y6E0	443 aa		10.77	□□□□□ -0.69
ATP9B-223	ENST00000590608	NKX1-1	Q15270	411 aa	Predicted RBP	10.75	□□□□□ -0.69
ATP9B-223	ENST00000590608	DPY19L2	Q6NUT2	758 aa		10.75	□□□□□ -0.69
ATP9B-223	ENST00000590608	POTEG	Q6S5H5	508 aa		10.74	□□□□□ -0.69
ATP9B-223	ENST00000590608	MAMSTR	Q6ZN01	415 aa		10.73	□□□□□ -0.69
ATP9B-223	ENST00000590608	MS4A4A	Q96JQ5	239 aa		10.73	□□□□□ -0.69
ATP9B-223	ENST00000590608	SCUBE2	Q9NQ36	999 aa		10.72	□□□□□ -0.69
ATP9B-223	ENST00000590608	PHF8	Q9UPP1	1060 aa		10.71	□□□□□ -0.69
ATP9B-223	ENST00000590608	SOX12	O15370	315 aa		10.7	□□□□□ -0.7
ATP9B-223	ENST00000590608	FBXO22	Q8NEZ5	403 aa		10.69	□□□□□ -0.7
ATP9B-223	ENST00000590608	MFRP	Q9BY79	579 aa		10.69	□□□□□ -0.7
ATP9B-223	ENST00000590608	GTPBP6	O43824	516 aa	Predicted RBP	10.64	□□□□□ -0.71
ATP9B-223	ENST00000590608	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.64	□□□□□ -0.71

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