RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 EVX2Q03828 476 aa12.23□□□□□ -0.45
TUBD1-208ENST00000588009 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
TUBD1-208ENST00000588009 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
TUBD1-208ENST00000588009 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
TUBD1-208ENST00000588009 CIZ1Q9ULV3 898 aaPredicted RBP12.21□□□□□ -0.45
TUBD1-208ENST00000588009 KDM2AQ9Y2K7 1162 aa12.21□□□□□ -0.45
TUBD1-208ENST00000588009 FARP1Q9Y4F1 1045 aaPredicted RBP12.18□□□□□ -0.46
TUBD1-208ENST00000588009 SPRYD3Q8NCJ5 442 aa12.17□□□□□ -0.46
TUBD1-208ENST00000588009 TAOK2Q9UL54 1235 aa12.13□□□□□ -0.47
TUBD1-208ENST00000588009 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
TUBD1-208ENST00000588009 CLCN6P51797 869 aa12.12□□□□□ -0.47
TUBD1-208ENST00000588009 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
TUBD1-208ENST00000588009 TRIM41Q8WV44 630 aa12.11□□□□□ -0.47
TUBD1-208ENST00000588009 TSHZ2Q9NRE2 1034 aa12.1□□□□□ -0.47
TUBD1-208ENST00000588009 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
TUBD1-208ENST00000588009 GABBR2O75899 941 aa12.07□□□□□ -0.48
TUBD1-208ENST00000588009 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
TUBD1-208ENST00000588009 GSE1Q14687 1217 aa12.02□□□□□ -0.49
TUBD1-208ENST00000588009 HS6ST3Q8IZP7 471 aa12.01□□□□□ -0.49
TUBD1-208ENST00000588009 NUBP1P53384 320 aa11.98□□□□□ -0.49
TUBD1-208ENST00000588009 RNF25Q96BH1 459 aaPredicted RBP11.97□□□□□ -0.49
TUBD1-208ENST00000588009 PAK3O75914 559 aaPredicted RBP11.96□□□□□ -0.49
TUBD1-208ENST00000588009 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
TUBD1-208ENST00000588009 DNAJC5Q9H3Z4 198 aa11.95□□□□□ -0.5
TUBD1-208ENST00000588009 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
TUBD1-208ENST00000588009 ZRANB1Q9UGI0 708 aa11.93□□□□□ -0.5
TUBD1-208ENST00000588009 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
TUBD1-208ENST00000588009 RIOK3O14730 519 aaKnown RBP11.89□□□□□ -0.51
TUBD1-208ENST00000588009 NKX1-1Q15270 411 aaPredicted RBP11.85□□□□□ -0.51
TUBD1-208ENST00000588009 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
TUBD1-208ENST00000588009 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
TUBD1-208ENST00000588009 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
TUBD1-208ENST00000588009 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-208ENST00000588009 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
TUBD1-208ENST00000588009 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
TUBD1-208ENST00000588009 NBR1Q14596 966 aa11.79□□□□□ -0.52
TUBD1-208ENST00000588009 STK25O00506 426 aa11.78□□□□□ -0.52
TUBD1-208ENST00000588009 LHX8Q68G74 356 aa11.78□□□□□ -0.52
TUBD1-208ENST00000588009 RASEFQ8IZ41 740 aa11.76□□□□□ -0.53
TUBD1-208ENST00000588009 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
TUBD1-208ENST00000588009 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
TUBD1-208ENST00000588009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.69□□□□□ -0.54
TUBD1-208ENST00000588009 GALR2O43603 387 aaPredicted RBP11.69□□□□□ -0.54
TUBD1-208ENST00000588009 ZFP91Q96JP5 570 aaPredicted RBP11.69□□□□□ -0.54
TUBD1-208ENST00000588009 PHF12Q96QT6 1004 aa11.69□□□□□ -0.54
TUBD1-208ENST00000588009 BCL11BQ9C0K0 894 aaPredicted RBP11.69□□□□□ -0.54
TUBD1-208ENST00000588009 STK24Q9Y6E0 443 aa11.69□□□□□ -0.54
TUBD1-208ENST00000588009 PYGBP11216 843 aa11.66□□□□□ -0.54
TUBD1-208ENST00000588009 RYDENQ9NUL5 291 aaKnown RBP11.65□□□□□ -0.54
TUBD1-208ENST00000588009 TSPYL2Q9H2G4 693 aaPredicted RBP11.63□□□□□ -0.55
TUBD1-208ENST00000588009 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
TUBD1-208ENST00000588009 MS4A3Q96HJ5 214 aa11.55□□□□□ -0.56
TUBD1-208ENST00000588009 ASTLQ6HA08 431 aaPredicted RBP11.52□□□□□ -0.57
TUBD1-208ENST00000588009 ZNF467Q7Z7K2 595 aaPredicted RBP11.52□□□□□ -0.57
TUBD1-208ENST00000588009 KIF12Q96FN5 646 aa11.51□□□□□ -0.57
TUBD1-208ENST00000588009 SLC39A7Q92504 469 aa11.5□□□□□ -0.57
TUBD1-208ENST00000588009 C7P10643 843 aa11.48□□□□□ -0.57
TUBD1-208ENST00000588009 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
TUBD1-208ENST00000588009 PDAP1Q13442 181 aaKnown RBP11.47□□□□□ -0.57
TUBD1-208ENST00000588009 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
TUBD1-208ENST00000588009 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
TUBD1-208ENST00000588009 PCDHB13Q9Y5F0 798 aa11.44□□□□□ -0.58
TUBD1-208ENST00000588009 MAP3K13O43283 966 aa11.43□□□□□ -0.58
TUBD1-208ENST00000588009 CADPS2Q86UW7 1296 aa11.43□□□□□ -0.58
TUBD1-208ENST00000588009 WDR70Q9NW82 654 aa11.43□□□□□ -0.58
TUBD1-208ENST00000588009 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
TUBD1-208ENST00000588009 TIE1P35590 1138 aa11.42□□□□□ -0.58
TUBD1-208ENST00000588009 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
TUBD1-208ENST00000588009 PSEN1P49768 467 aa11.39□□□□□ -0.59
TUBD1-208ENST00000588009 MAMSTRQ6ZN01 415 aa11.38□□□□□ -0.59
TUBD1-208ENST00000588009 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
TUBD1-208ENST00000588009 KCNV2Q8TDN2 545 aa11.37□□□□□ -0.59
TUBD1-208ENST00000588009 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
TUBD1-208ENST00000588009 OTUD5Q96G74 571 aa11.35□□□□□ -0.59
TUBD1-208ENST00000588009 BMP2KQ9NSY1 1161 aaPredicted RBP11.35□□□□□ -0.59
TUBD1-208ENST00000588009 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
TUBD1-208ENST00000588009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.3□□□□□ -0.6
TUBD1-208ENST00000588009 TTLL13PA6NNM8 815 aa11.29□□□□□ -0.6
TUBD1-208ENST00000588009 IER5LQ5T953 404 aa11.29□□□□□ -0.6
TUBD1-208ENST00000588009 PPP1R37O75864 691 aa11.28□□□□□ -0.6
TUBD1-208ENST00000588009 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
TUBD1-208ENST00000588009 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
TUBD1-208ENST00000588009 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
TUBD1-208ENST00000588009 SEC24BO95487 1268 aa11.27□□□□□ -0.61
TUBD1-208ENST00000588009 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
TUBD1-208ENST00000588009 SOX12O15370 315 aa11.26□□□□□ -0.61
TUBD1-208ENST00000588009 NLRP6P59044 892 aa11.26□□□□□ -0.61
TUBD1-208ENST00000588009 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
TUBD1-208ENST00000588009 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
TUBD1-208ENST00000588009 GTF3C3Q9Y5Q9 886 aa11.26□□□□□ -0.61
TUBD1-208ENST00000588009 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
TUBD1-208ENST00000588009 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
TUBD1-208ENST00000588009 TMEM132AQ24JP5 1023 aa11.23□□□□□ -0.61
TUBD1-208ENST00000588009 TRIM35Q9UPQ4 493 aa11.23□□□□□ -0.61
TUBD1-208ENST00000588009 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
TUBD1-208ENST00000588009 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
TUBD1-208ENST00000588009 E2F4Q16254 413 aa11.21□□□□□ -0.61
TUBD1-208ENST00000588009 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
TUBD1-208ENST00000588009 TIMELESSQ9UNS1 1208 aa11.2□□□□□ -0.62
TUBD1-208ENST00000588009 POTEJP0CG39 1038 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms