RNA–Protein interactions for RNA: ENST00000587539.1

ZNF404-202, Transcript of zinc finger protein 404, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF404, Length 1,851 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-202ENST00000587539 PHF12Q96QT6 1004 aa10.2□□□□□ -0.78
ZNF404-202ENST00000587539 ATMINO43313 823 aaPredicted RBP10.19□□□□□ -0.78
ZNF404-202ENST00000587539 SPNS2Q8IVW8 549 aa10.17□□□□□ -0.78
ZNF404-202ENST00000587539 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
ZNF404-202ENST00000587539 MS4A3Q96HJ5 214 aa10.06□□□□□ -0.8
ZNF404-202ENST00000587539 ST18O60284 1047 aa10.01□□□□□ -0.81
ZNF404-202ENST00000587539 SLC4A1APQ9BWU0 796 aaKnown RBP10□□□□□ -0.81
ZNF404-202ENST00000587539 NPM1P06748 294 aaKnown RBP eCLIP9.99□□□□□ -0.81
ZNF404-202ENST00000587539 ATN1P54259 1190 aaPredicted RBP9.99□□□□□ -0.81
ZNF404-202ENST00000587539 POTEFA5A3E0 1075 aa9.98□□□□□ -0.81
ZNF404-202ENST00000587539 STAG3Q9UJ98 1225 aa9.98□□□□□ -0.81
ZNF404-202ENST00000587539 TMEM121BQ9BXQ6 578 aaPredicted RBP9.94□□□□□ -0.82
ZNF404-202ENST00000587539 SLAIN1Q8ND83 568 aa9.86□□□□□ -0.83
ZNF404-202ENST00000587539 SEC24BO95487 1268 aa9.85□□□□□ -0.83
ZNF404-202ENST00000587539 BMP2KQ9NSY1 1161 aaPredicted RBP9.84□□□□□ -0.83
ZNF404-202ENST00000587539 ZBTB22O15209 634 aa9.82□□□□□ -0.84
ZNF404-202ENST00000587539 TIE1P35590 1138 aa9.81□□□□□ -0.84
ZNF404-202ENST00000587539 COLQQ9Y215 455 aaPredicted RBP9.81□□□□□ -0.84
ZNF404-202ENST00000587539 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
ZNF404-202ENST00000587539 SNPHO15079 494 aa9.78□□□□□ -0.84
ZNF404-202ENST00000587539 IER5LQ5T953 404 aa9.77□□□□□ -0.85
ZNF404-202ENST00000587539 KIF12Q96FN5 646 aa9.72□□□□□ -0.85
ZNF404-202ENST00000587539 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.85
ZNF404-202ENST00000587539 MARVELD3Q96A59 401 aa9.68□□□□□ -0.86
ZNF404-202ENST00000587539 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
ZNF404-202ENST00000587539 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
ZNF404-202ENST00000587539 TTLL13PA6NNM8 815 aa9.66□□□□□ -0.86
ZNF404-202ENST00000587539 TRPC6Q9Y210 931 aa9.66□□□□□ -0.86
ZNF404-202ENST00000587539 TSPYL2Q9H2G4 693 aaPredicted RBP9.64□□□□□ -0.87
ZNF404-202ENST00000587539 EMP3P54852 163 aa9.6□□□□□ -0.87
ZNF404-202ENST00000587539 TRIM35Q9UPQ4 493 aa9.59□□□□□ -0.87
ZNF404-202ENST00000587539 MAP3K13O43283 966 aa9.57□□□□□ -0.88
ZNF404-202ENST00000587539 PLCG2P16885 1265 aa9.56□□□□□ -0.88
ZNF404-202ENST00000587539 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
ZNF404-202ENST00000587539 RNF166Q96A37 237 aaPredicted RBP9.53□□□□□ -0.88
ZNF404-202ENST00000587539 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.52□□□□□ -0.89
ZNF404-202ENST00000587539 SGIP1Q9BQI5 828 aa9.5□□□□□ -0.89
ZNF404-202ENST00000587539 POTEB3A0JP26 581 aa9.49□□□□□ -0.89
ZNF404-202ENST00000587539 POTEBQ6S5H4 581 aa9.49□□□□□ -0.89
ZNF404-202ENST00000587539 FAM205CA6NFA0 338 aa9.48□□□□□ -0.89
ZNF404-202ENST00000587539 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
ZNF404-202ENST00000587539 EHMT2Q96KQ7 1210 aa9.42□□□□□ -0.9
ZNF404-202ENST00000587539 OCEL1Q9H607 264 aa9.39□□□□□ -0.91
ZNF404-202ENST00000587539 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
ZNF404-202ENST00000587539 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
ZNF404-202ENST00000587539 SPDYE4A6NLX3 237 aa9.35□□□□□ -0.91
ZNF404-202ENST00000587539 TMEM106CQ9BVX2 250 aa9.34□□□□□ -0.91
ZNF404-202ENST00000587539 PTGER2P43116 358 aa9.32□□□□□ -0.92
ZNF404-202ENST00000587539 CSRNP3Q8WYN3 585 aa9.31□□□□□ -0.92
ZNF404-202ENST00000587539 C3orf67Q6ZVT6 689 aa9.3□□□□□ -0.92
ZNF404-202ENST00000587539 RASEFQ8IZ41 740 aa9.28□□□□□ -0.92
ZNF404-202ENST00000587539 IFNL1Q8IU54 200 aa9.25□□□□□ -0.93
ZNF404-202ENST00000587539 PLEKHG5O94827 1062 aa9.22□□□□□ -0.93
ZNF404-202ENST00000587539 L3MBTL3Q96JM7 780 aaPredicted RBP9.21□□□□□ -0.94
ZNF404-202ENST00000587539 ERBB3P21860 1342 aa9.19□□□□□ -0.94
ZNF404-202ENST00000587539 HOXB1P14653 301 aaPredicted RBP9.19□□□□□ -0.94
ZNF404-202ENST00000587539 PLA2G2EQ9NZK7 142 aa9.15□□□□□ -0.95
ZNF404-202ENST00000587539 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
ZNF404-202ENST00000587539 HOXB3P14651 431 aaPredicted RBP9.11□□□□□ -0.95
ZNF404-202ENST00000587539 ZNF710Q8N1W2 664 aa9.11□□□□□ -0.95
ZNF404-202ENST00000587539 ZNF687Q8N1G0 1237 aa9.08□□□□□ -0.96
ZNF404-202ENST00000587539 VARS2Q5ST30 1063 aaKnown RBP9.07□□□□□ -0.96
ZNF404-202ENST00000587539 DOK7Q18PE1 504 aa9.06□□□□□ -0.96
ZNF404-202ENST00000587539 MIER1Q8N108 512 aa9.02□□□□□ -0.96
ZNF404-202ENST00000587539 RIMBP2O15034 1052 aa9.01□□□□□ -0.97
ZNF404-202ENST00000587539 PROM2Q8N271 834 aa9.01□□□□□ -0.97
ZNF404-202ENST00000587539 FAM212AQ96EL1 285 aa8.99□□□□□ -0.97
ZNF404-202ENST00000587539 HCSTQ9UBK5 93 aa8.99□□□□□ -0.97
ZNF404-202ENST00000587539 NUBP1P53384 320 aa8.98□□□□□ -0.97
ZNF404-202ENST00000587539 RGS20O76081 388 aa8.97□□□□□ -0.97
ZNF404-202ENST00000587539 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
ZNF404-202ENST00000587539 ZBTB47Q9UFB7 747 aaPredicted RBP8.97□□□□□ -0.97
ZNF404-202ENST00000587539 GOLGA2Q08379 1002 aa8.95□□□□□ -0.98
ZNF404-202ENST00000587539 ANKRD13DQ6ZTN6 518 aa8.94□□□□□ -0.98
ZNF404-202ENST00000587539 IRX2Q9BZI1 471 aaPredicted RBP8.94□□□□□ -0.98
ZNF404-202ENST00000587539 ZSWIM6Q9HCJ5 1215 aa8.94□□□□□ -0.98
ZNF404-202ENST00000587539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.92□□□□□ -0.98
ZNF404-202ENST00000587539 G3V3G9 751 aa8.89□□□□□ -0.99
ZNF404-202ENST00000587539 DCAF8Q5TAQ9 597 aa8.89□□□□□ -0.99
ZNF404-202ENST00000587539 LSM11P83369 360 aaKnown RBP eCLIP8.88□□□□□ -0.99
ZNF404-202ENST00000587539 ILDR1Q86SU0 546 aaPredicted RBP8.87□□□□□ -0.99
ZNF404-202ENST00000587539 PCDHB8Q9UN66 801 aa8.85□□□□□ -0.99
ZNF404-202ENST00000587539 BOLA1Q9Y3E2 137 aa8.85□□□□□ -0.99
ZNF404-202ENST00000587539 PLCD3Q8N3E9 789 aa8.84□□□□□ -0.99
ZNF404-202ENST00000587539 PYGBP11216 843 aa8.79□□□□□ -1
ZNF404-202ENST00000587539 GPR153Q6NV75 609 aa8.79□□□□□ -1
ZNF404-202ENST00000587539 PBX2P40425 430 aa8.78□□□□□ -1
ZNF404-202ENST00000587539 ZNF467Q7Z7K2 595 aaPredicted RBP8.77□□□□□ -1.01
ZNF404-202ENST00000587539 DPY19L2Q6NUT2 758 aa8.75□□□□□ -1.01
ZNF404-202ENST00000587539 IFFO2Q5TF58 517 aa8.72□□□□□ -1.01
ZNF404-202ENST00000587539 ZNF316A6NFI3 1004 aaPredicted RBP8.72□□□□□ -1.01
ZNF404-202ENST00000587539 PSEN1P49768 467 aa8.66□□□□□ -1.02
ZNF404-202ENST00000587539 Q6ZNB5 142 aa8.65□□□□□ -1.02
ZNF404-202ENST00000587539 A0A0G2JS52 829 aa8.62□□□□□ -1.03
ZNF404-202ENST00000587539 ARSIQ5FYB1 569 aa8.62□□□□□ -1.03
ZNF404-202ENST00000587539 ADGRD1Q6QNK2 874 aa8.6□□□□□ -1.03
ZNF404-202ENST00000587539 CHRM1P11229 460 aaPredicted RBP8.56□□□□□ -1.04
ZNF404-202ENST00000587539 PDAP1Q13442 181 aaKnown RBP8.55□□□□□ -1.04
ZNF404-202ENST00000587539 POTEEQ6S8J3 1075 aa8.55□□□□□ -1.04
ZNF404-202ENST00000587539 TMEM92Q6UXU6 159 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms