RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
ZNF560-202ENST00000585974 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
ZNF560-202ENST00000585974 PHF12Q96QT6 1004 aa12.52□□□□□ -0.41
ZNF560-202ENST00000585974 SPOCK2Q92563 424 aa12.51□□□□□ -0.41
ZNF560-202ENST00000585974 GSE1Q14687 1217 aa12.49□□□□□ -0.41
ZNF560-202ENST00000585974 DCAF8Q5TAQ9 597 aa12.48□□□□□ -0.41
ZNF560-202ENST00000585974 SGIP1Q9BQI5 828 aa12.48□□□□□ -0.41
ZNF560-202ENST00000585974 KIF12Q96FN5 646 aa12.47□□□□□ -0.41
ZNF560-202ENST00000585974 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
ZNF560-202ENST00000585974 GALR2O43603 387 aaPredicted RBP12.43□□□□□ -0.42
ZNF560-202ENST00000585974 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
ZNF560-202ENST00000585974 MAP3K13O43283 966 aa12.38□□□□□ -0.43
ZNF560-202ENST00000585974 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
ZNF560-202ENST00000585974 PCDHB13Q9Y5F0 798 aa12.35□□□□□ -0.43
ZNF560-202ENST00000585974 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
ZNF560-202ENST00000585974 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
ZNF560-202ENST00000585974 TIE1P35590 1138 aa12.3□□□□□ -0.44
ZNF560-202ENST00000585974 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
ZNF560-202ENST00000585974 PYGBP11216 843 aa12.29□□□□□ -0.44
ZNF560-202ENST00000585974 ASTLQ6HA08 431 aaPredicted RBP12.29□□□□□ -0.44
ZNF560-202ENST00000585974 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
ZNF560-202ENST00000585974 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
ZNF560-202ENST00000585974 ATMINO43313 823 aaPredicted RBP12.25□□□□□ -0.45
ZNF560-202ENST00000585974 BMP2KQ9NSY1 1161 aaPredicted RBP12.21□□□□□ -0.45
ZNF560-202ENST00000585974 C7P10643 843 aa12.19□□□□□ -0.46
ZNF560-202ENST00000585974 SLC39A7Q92504 469 aa12.19□□□□□ -0.46
ZNF560-202ENST00000585974 TTLL13PA6NNM8 815 aa12.17□□□□□ -0.46
ZNF560-202ENST00000585974 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
ZNF560-202ENST00000585974 ATN1P54259 1190 aaPredicted RBP12.16□□□□□ -0.46
ZNF560-202ENST00000585974 PCDHB8Q9UN66 801 aa12.16□□□□□ -0.46
ZNF560-202ENST00000585974 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
ZNF560-202ENST00000585974 TMEM106CQ9BVX2 250 aa12.14□□□□□ -0.47
ZNF560-202ENST00000585974 IER5LQ5T953 404 aa12.12□□□□□ -0.47
ZNF560-202ENST00000585974 LHX8Q68G74 356 aa12.11□□□□□ -0.47
ZNF560-202ENST00000585974 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
ZNF560-202ENST00000585974 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
ZNF560-202ENST00000585974 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
ZNF560-202ENST00000585974 PSEN1P49768 467 aa12.07□□□□□ -0.48
ZNF560-202ENST00000585974 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
ZNF560-202ENST00000585974 RIOK3O14730 519 aaKnown RBP12.03□□□□□ -0.48
ZNF560-202ENST00000585974 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
ZNF560-202ENST00000585974 VGFO15240 615 aaPredicted RBP12□□□□□ -0.49
ZNF560-202ENST00000585974 SEC24BO95487 1268 aa12□□□□□ -0.49
ZNF560-202ENST00000585974 GOLGA2Q08379 1002 aa12□□□□□ -0.49
ZNF560-202ENST00000585974 PKD2Q13563 968 aa11.99□□□□□ -0.49
ZNF560-202ENST00000585974 MAMSTRQ6ZN01 415 aa11.97□□□□□ -0.49
ZNF560-202ENST00000585974 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
ZNF560-202ENST00000585974 RNF25Q96BH1 459 aaPredicted RBP11.95□□□□□ -0.5
ZNF560-202ENST00000585974 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
ZNF560-202ENST00000585974 PLCG2P16885 1265 aa11.93□□□□□ -0.5
ZNF560-202ENST00000585974 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
ZNF560-202ENST00000585974 POTEFA5A3E0 1075 aa11.92□□□□□ -0.5
ZNF560-202ENST00000585974 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
ZNF560-202ENST00000585974 COLQQ9Y215 455 aaPredicted RBP11.91□□□□□ -0.5
ZNF560-202ENST00000585974 CABP2Q9NPB3 220 aa11.88□□□□□ -0.51
ZNF560-202ENST00000585974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
ZNF560-202ENST00000585974 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
ZNF560-202ENST00000585974 SCUBE2Q9NQ36 999 aa11.86□□□□□ -0.51
ZNF560-202ENST00000585974 ILDR1Q86SU0 546 aaPredicted RBP11.85□□□□□ -0.51
ZNF560-202ENST00000585974 RGL2O15211 777 aa11.84□□□□□ -0.51
ZNF560-202ENST00000585974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.84□□□□□ -0.51
ZNF560-202ENST00000585974 SOX12O15370 315 aa11.83□□□□□ -0.52
ZNF560-202ENST00000585974 OTUD5Q96G74 571 aa11.83□□□□□ -0.52
ZNF560-202ENST00000585974 POTEJP0CG39 1038 aa11.82□□□□□ -0.52
ZNF560-202ENST00000585974 L3MBTL3Q96JM7 780 aaPredicted RBP11.82□□□□□ -0.52
ZNF560-202ENST00000585974 PDCD7Q8N8D1 485 aaKnown RBP11.8□□□□□ -0.52
ZNF560-202ENST00000585974 EFCAB3Q8N7B9 438 aa11.79□□□□□ -0.52
ZNF560-202ENST00000585974 STK25O00506 426 aa11.78□□□□□ -0.52
ZNF560-202ENST00000585974 BCL11BQ9C0K0 894 aaPredicted RBP11.78□□□□□ -0.52
ZNF560-202ENST00000585974 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
ZNF560-202ENST00000585974 G3V3G9 751 aa11.71□□□□□ -0.53
ZNF560-202ENST00000585974 NLRP6P59044 892 aa11.71□□□□□ -0.53
ZNF560-202ENST00000585974 AMER1Q5JTC6 1135 aaPredicted RBP11.7□□□□□ -0.54
ZNF560-202ENST00000585974 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
ZNF560-202ENST00000585974 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.69□□□□□ -0.54
ZNF560-202ENST00000585974 C3orf67Q6ZVT6 689 aa11.66□□□□□ -0.54
ZNF560-202ENST00000585974 BOLA1Q9Y3E2 137 aa11.66□□□□□ -0.54
ZNF560-202ENST00000585974 DNAJC5Q9H3Z4 198 aa11.65□□□□□ -0.54
ZNF560-202ENST00000585974 DPY19L2Q6NUT2 758 aa11.64□□□□□ -0.55
ZNF560-202ENST00000585974 SLAIN1Q8ND83 568 aa11.64□□□□□ -0.55
ZNF560-202ENST00000585974 TMEM121BQ9BXQ6 578 aaPredicted RBP11.64□□□□□ -0.55
ZNF560-202ENST00000585974 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
ZNF560-202ENST00000585974 FBXO22Q8NEZ5 403 aa11.62□□□□□ -0.55
ZNF560-202ENST00000585974 CHGAP10645 457 aaKnown RBP11.61□□□□□ -0.55
ZNF560-202ENST00000585974 MS4A4AQ96JQ5 239 aa11.61□□□□□ -0.55
ZNF560-202ENST00000585974 MFRPQ9BY79 579 aa11.61□□□□□ -0.55
ZNF560-202ENST00000585974 RYDENQ9NUL5 291 aaKnown RBP11.59□□□□□ -0.55
ZNF560-202ENST00000585974 SNPHO15079 494 aa11.58□□□□□ -0.56
ZNF560-202ENST00000585974 MICALL2Q8IY33 904 aa11.55□□□□□ -0.56
ZNF560-202ENST00000585974 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
ZNF560-202ENST00000585974 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
ZNF560-202ENST00000585974 FAM163AQ96GL9 167 aaPredicted RBP11.47□□□□□ -0.57
ZNF560-202ENST00000585974 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
ZNF560-202ENST00000585974 PPP1R37O75864 691 aa11.38□□□□□ -0.59
ZNF560-202ENST00000585974 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
ZNF560-202ENST00000585974 TMEM92Q6UXU6 159 aa11.37□□□□□ -0.59
ZNF560-202ENST00000585974 BBXQ8WY36 941 aaPredicted RBP11.37□□□□□ -0.59
ZNF560-202ENST00000585974 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
ZNF560-202ENST00000585974 ST18O60284 1047 aa11.36□□□□□ -0.59
ZNF560-202ENST00000585974 LCE2DQ5TA82 110 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms