RNA–Protein interactions for RNA: ENST00000585714.1

ABCA9-208, Transcript of ATP binding cassette subfamily A member 9, human

TSL 4

Gene ABCA9, Length 582 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA9-208	ENST00000585714	PLCD3	Q8N3E9	789 aa		14.79	□□□□□ -0.04
ABCA9-208	ENST00000585714	PELP1	Q8IZL8	1130 aa	Known RBP	14.78	□□□□□ -0.04
ABCA9-208	ENST00000585714	KIF12	Q96FN5	646 aa		14.74	□□□□□ -0.05
ABCA9-208	ENST00000585714	ASTL	Q6HA08	431 aa	Predicted RBP	14.73	□□□□□ -0.05
ABCA9-208	ENST00000585714	ATMIN	O43313	823 aa	Predicted RBP	14.7	□□□□□ -0.06
ABCA9-208	ENST00000585714	POTEB2	H3BUK9	544 aa		14.69	□□□□□ -0.06
ABCA9-208	ENST00000585714	NUBP1	P53384	320 aa		14.66	□□□□□ -0.06
ABCA9-208	ENST00000585714	ZBTB47	Q9UFB7	747 aa	Predicted RBP	14.66	□□□□□ -0.06
ABCA9-208	ENST00000585714	MAP3K13	O43283	966 aa		14.65	□□□□□ -0.06
ABCA9-208	ENST00000585714	TRPC6	Q9Y210	931 aa		14.63	□□□□□ -0.07
ABCA9-208	ENST00000585714	OTUD5	Q96G74	571 aa		14.61	□□□□□ -0.07
ABCA9-208	ENST00000585714	METRN	Q9UJH8	293 aa		14.61	□□□□□ -0.07
ABCA9-208	ENST00000585714	ATN1	P54259	1190 aa	Predicted RBP	14.6	□□□□□ -0.07
ABCA9-208	ENST00000585714	SLC39A7	Q92504	469 aa		14.59	□□□□□ -0.07
ABCA9-208	ENST00000585714	BMP2K	Q9NSY1	1161 aa	Predicted RBP	14.58	□□□□□ -0.08
ABCA9-208	ENST00000585714	C7	P10643	843 aa		14.57	□□□□□ -0.08
ABCA9-208	ENST00000585714	FBXO3	Q9UK99	471 aa		14.55	□□□□□ -0.08
ABCA9-208	ENST00000585714	TIE1	P35590	1138 aa		14.52	□□□□□ -0.09
ABCA9-208	ENST00000585714	FAM212A	Q96EL1	285 aa		14.51	□□□□□ -0.09
ABCA9-208	ENST00000585714	POTEJ	P0CG39	1038 aa		14.5	□□□□□ -0.09
ABCA9-208	ENST00000585714	SGIP1	Q9BQI5	828 aa		14.49	□□□□□ -0.09
ABCA9-208	ENST00000585714	PCDHB13	Q9Y5F0	798 aa		14.49	□□□□□ -0.09
ABCA9-208	ENST00000585714	TTLL13P	A6NNM8	815 aa		14.47	□□□□□ -0.09
ABCA9-208	ENST00000585714	POTEF	A5A3E0	1075 aa		14.45	□□□□□ -0.1
ABCA9-208	ENST00000585714	IFNL1	Q8IU54	200 aa		14.44	□□□□□ -0.1
ABCA9-208	ENST00000585714	VASP	P50552	380 aa	Predicted RBP	14.43	□□□□□ -0.1
ABCA9-208	ENST00000585714	DCAF8	Q5TAQ9	597 aa		14.38	□□□□□ -0.11
ABCA9-208	ENST00000585714	TRIM35	Q9UPQ4	493 aa		14.37	□□□□□ -0.11
ABCA9-208	ENST00000585714	COLQ	Q9Y215	455 aa	Predicted RBP	14.35	□□□□□ -0.11
ABCA9-208	ENST00000585714	PYGB	P11216	843 aa		14.34	□□□□□ -0.11
ABCA9-208	ENST00000585714	MAMSTR	Q6ZN01	415 aa		14.33	□□□□□ -0.12
ABCA9-208	ENST00000585714	KLHL34	Q8N239	644 aa		14.32	□□□□□ -0.12
ABCA9-208	ENST00000585714	TMEM106C	Q9BVX2	250 aa		14.31	□□□□□ -0.12
ABCA9-208	ENST00000585714	IER5L	Q5T953	404 aa		14.3	□□□□□ -0.12
ABCA9-208	ENST00000585714	SEC24B	O95487	1268 aa		14.28	□□□□□ -0.12
ABCA9-208	ENST00000585714	SCUBE2	Q9NQ36	999 aa		14.27	□□□□□ -0.13
ABCA9-208	ENST00000585714	PCDHB8	Q9UN66	801 aa		14.24	□□□□□ -0.13
ABCA9-208	ENST00000585714	GSE1	Q14687	1217 aa		14.22	□□□□□ -0.13
ABCA9-208	ENST00000585714	IFNLR1	Q8IU57	520 aa	Predicted RBP	14.2	□□□□□ -0.14
ABCA9-208	ENST00000585714	POTEM	A6NI47	508 aa		14.16	□□□□□ -0.14
ABCA9-208	ENST00000585714	IRX5	P78411	483 aa	Predicted RBP	14.16	□□□□□ -0.14
ABCA9-208	ENST00000585714	CHRM1	P11229	460 aa	Predicted RBP	14.14	□□□□□ -0.15
ABCA9-208	ENST00000585714	LCE2D	Q5TA82	110 aa	Predicted RBP	14.14	□□□□□ -0.15
ABCA9-208	ENST00000585714	POTEG	Q6S5H5	508 aa		14.14	□□□□□ -0.15
ABCA9-208	ENST00000585714	PLCG2	P16885	1265 aa		14.13	□□□□□ -0.15
ABCA9-208	ENST00000585714	ZNF467	Q7Z7K2	595 aa	Predicted RBP	14.11	□□□□□ -0.15
ABCA9-208	ENST00000585714	SPOCK2	Q92563	424 aa		14.11	□□□□□ -0.15
ABCA9-208	ENST00000585714	FAM163A	Q96GL9	167 aa	Predicted RBP	14.07	□□□□□ -0.16
ABCA9-208	ENST00000585714	OCEL1	Q9H607	264 aa		14.06	□□□□□ -0.16
ABCA9-208	ENST00000585714	PLSCR2	Q9NRY7	297 aa		14.02	□□□□□ -0.17
ABCA9-208	ENST00000585714	CIZ1	Q9ULV3	898 aa	Predicted RBP	14.02	□□□□□ -0.17
ABCA9-208	ENST00000585714	PSEN1	P49768	467 aa		14.01	□□□□□ -0.17
ABCA9-208	ENST00000585714	SLAIN1	Q8ND83	568 aa		14	□□□□□ -0.17
ABCA9-208	ENST00000585714	PDCD7	Q8N8D1	485 aa	Known RBP	13.97	□□□□□ -0.17
ABCA9-208	ENST00000585714	PDAP1	Q13442	181 aa	Known RBP	13.95	□□□□□ -0.18
ABCA9-208	ENST00000585714	GOLGA2	Q08379	1002 aa		13.94	□□□□□ -0.18
ABCA9-208	ENST00000585714	MKRN3	Q13064	507 aa	Known RBP	13.94	□□□□□ -0.18
ABCA9-208	ENST00000585714	PCDH10	Q9P2E7	1040 aa		13.9	□□□□□ -0.18
ABCA9-208	ENST00000585714	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
ABCA9-208	ENST00000585714	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCA9-208	ENST00000585714	ILDR1	Q86SU0	546 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCA9-208	ENST00000585714	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.86	□□□□□ -0.19
ABCA9-208	ENST00000585714	ST18	O60284	1047 aa		13.85	□□□□□ -0.19
ABCA9-208	ENST00000585714	CABP2	Q9NPB3	220 aa		13.84	□□□□□ -0.19
ABCA9-208	ENST00000585714	RTN4	Q9NQC3	1192 aa	Known RBP	13.83	□□□□□ -0.2
ABCA9-208	ENST00000585714	TRIM41	Q8WV44	630 aa		13.82	□□□□□ -0.2
ABCA9-208	ENST00000585714	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.81	□□□□□ -0.2
ABCA9-208	ENST00000585714	DPY19L2	Q6NUT2	758 aa		13.78	□□□□□ -0.2
ABCA9-208	ENST00000585714	C3orf67	Q6ZVT6	689 aa		13.78	□□□□□ -0.2
ABCA9-208	ENST00000585714	RNF25	Q96BH1	459 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA9-208	ENST00000585714	SNPH	O15079	494 aa		13.72	□□□□□ -0.21
ABCA9-208	ENST00000585714	CDAN1	Q8IWY9	1227 aa		13.71	□□□□□ -0.21
ABCA9-208	ENST00000585714	EFCAB3	Q8N7B9	438 aa		13.69	□□□□□ -0.22
ABCA9-208	ENST00000585714	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.69	□□□□□ -0.22
ABCA9-208	ENST00000585714	RIOK3	O14730	519 aa	Known RBP	13.67	□□□□□ -0.22
ABCA9-208	ENST00000585714	BOLA1	Q9Y3E2	137 aa		13.67	□□□□□ -0.22
ABCA9-208	ENST00000585714	MARVELD3	Q96A59	401 aa		13.63	□□□□□ -0.23
ABCA9-208	ENST00000585714	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCA9-208	ENST00000585714	ZFP91	Q96JP5	570 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCA9-208	ENST00000585714		G3V3G9	751 aa		13.6	□□□□□ -0.23
ABCA9-208	ENST00000585714	VGF	O15240	615 aa	Predicted RBP	13.59	□□□□□ -0.23
ABCA9-208	ENST00000585714	SOX12	O15370	315 aa		13.53	□□□□□ -0.24
ABCA9-208	ENST00000585714	MS4A4A	Q96JQ5	239 aa		13.53	□□□□□ -0.24
ABCA9-208	ENST00000585714	HOXB3	P14651	431 aa	Predicted RBP	13.52	□□□□□ -0.25
ABCA9-208	ENST00000585714	PHF8	Q9UPP1	1060 aa		13.51	□□□□□ -0.25
ABCA9-208	ENST00000585714	EMP3	P54852	163 aa		13.5	□□□□□ -0.25
ABCA9-208	ENST00000585714	MICALL2	Q8IY33	904 aa		13.5	□□□□□ -0.25
ABCA9-208	ENST00000585714	POTEB3	A0JP26	581 aa		13.46	□□□□□ -0.25
ABCA9-208	ENST00000585714	POTEB	Q6S5H4	581 aa		13.46	□□□□□ -0.25
ABCA9-208	ENST00000585714	TMEM92	Q6UXU6	159 aa		13.46	□□□□□ -0.25
ABCA9-208	ENST00000585714	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCA9-208	ENST00000585714	HS3ST6	Q96QI5	342 aa		13.43	□□□□□ -0.26
ABCA9-208	ENST00000585714	FAM205C	A6NFA0	338 aa		13.42	□□□□□ -0.26
ABCA9-208	ENST00000585714	ECM2	O94769	699 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCA9-208	ENST00000585714	PKD2	Q13563	968 aa		13.41	□□□□□ -0.26
ABCA9-208	ENST00000585714	TAOK2	Q9UL54	1235 aa		13.41	□□□□□ -0.26
ABCA9-208	ENST00000585714	FBXO22	Q8NEZ5	403 aa		13.4	□□□□□ -0.26
ABCA9-208	ENST00000585714	STK24	Q9Y6E0	443 aa		13.4	□□□□□ -0.26
ABCA9-208	ENST00000585714	DOK7	Q18PE1	504 aa		13.39	□□□□□ -0.27
ABCA9-208	ENST00000585714	SPNS2	Q8IVW8	549 aa		13.39	□□□□□ -0.27

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