RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
NLK-206ENST00000584878 FAM212AQ96EL1 285 aa14.12□□□□□ -0.15
NLK-206ENST00000584878 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
NLK-206ENST00000584878 DCAF8Q5TAQ9 597 aa14.09□□□□□ -0.15
NLK-206ENST00000584878 GALR2O43603 387 aaPredicted RBP14.07□□□□□ -0.16
NLK-206ENST00000584878 MS4A3Q96HJ5 214 aa14.03□□□□□ -0.16
NLK-206ENST00000584878 KIF12Q96FN5 646 aa14.02□□□□□ -0.17
NLK-206ENST00000584878 MAP3K13O43283 966 aa14□□□□□ -0.17
NLK-206ENST00000584878 PYGBP11216 843 aa13.99□□□□□ -0.17
NLK-206ENST00000584878 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
NLK-206ENST00000584878 CLCN6P51797 869 aa13.97□□□□□ -0.17
NLK-206ENST00000584878 GSE1Q14687 1217 aa13.96□□□□□ -0.17
NLK-206ENST00000584878 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
NLK-206ENST00000584878 TRPC6Q9Y210 931 aa13.91□□□□□ -0.18
NLK-206ENST00000584878 PCDHB13Q9Y5F0 798 aa13.91□□□□□ -0.18
NLK-206ENST00000584878 DCBLD2Q96PD2 775 aa13.9□□□□□ -0.18
NLK-206ENST00000584878 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
NLK-206ENST00000584878 LHX8Q68G74 356 aa13.83□□□□□ -0.2
NLK-206ENST00000584878 PCDHB8Q9UN66 801 aa13.82□□□□□ -0.2
NLK-206ENST00000584878 SGIP1Q9BQI5 828 aa13.81□□□□□ -0.2
NLK-206ENST00000584878 CHRM1P11229 460 aaPredicted RBP13.78□□□□□ -0.2
NLK-206ENST00000584878 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
NLK-206ENST00000584878 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
NLK-206ENST00000584878 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
NLK-206ENST00000584878 ASTLQ6HA08 431 aaPredicted RBP13.75□□□□□ -0.21
NLK-206ENST00000584878 ATN1P54259 1190 aaPredicted RBP13.74□□□□□ -0.21
NLK-206ENST00000584878 TIE1P35590 1138 aa13.73□□□□□ -0.21
NLK-206ENST00000584878 TTLL13PA6NNM8 815 aa13.72□□□□□ -0.21
NLK-206ENST00000584878 ZNF467Q7Z7K2 595 aaPredicted RBP13.71□□□□□ -0.21
NLK-206ENST00000584878 PKD2Q13563 968 aa13.7□□□□□ -0.22
NLK-206ENST00000584878 TRIM41Q8WV44 630 aa13.69□□□□□ -0.22
NLK-206ENST00000584878 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
NLK-206ENST00000584878 RNF25Q96BH1 459 aaPredicted RBP13.68□□□□□ -0.22
NLK-206ENST00000584878 ECM2O94769 699 aaPredicted RBP13.65□□□□□ -0.22
NLK-206ENST00000584878 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
NLK-206ENST00000584878 PSEN1P49768 467 aa13.62□□□□□ -0.23
NLK-206ENST00000584878 METRNQ9UJH8 293 aa13.6□□□□□ -0.23
NLK-206ENST00000584878 PDAP1Q13442 181 aaKnown RBP13.59□□□□□ -0.23
NLK-206ENST00000584878 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
NLK-206ENST00000584878 RGL2O15211 777 aa13.57□□□□□ -0.24
NLK-206ENST00000584878 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
NLK-206ENST00000584878 C7P10643 843 aa13.53□□□□□ -0.24
NLK-206ENST00000584878 POTEFA5A3E0 1075 aa13.51□□□□□ -0.25
NLK-206ENST00000584878 POTEB2H3BUK9 544 aa13.5□□□□□ -0.25
NLK-206ENST00000584878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.49□□□□□ -0.25
NLK-206ENST00000584878 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
NLK-206ENST00000584878 COLQQ9Y215 455 aaPredicted RBP13.49□□□□□ -0.25
NLK-206ENST00000584878 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
NLK-206ENST00000584878 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
NLK-206ENST00000584878 SEC24BO95487 1268 aa13.45□□□□□ -0.26
NLK-206ENST00000584878 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
NLK-206ENST00000584878 IER5LQ5T953 404 aa13.45□□□□□ -0.26
NLK-206ENST00000584878 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
NLK-206ENST00000584878 MKRN3Q13064 507 aaKnown RBP13.41□□□□□ -0.26
NLK-206ENST00000584878 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
NLK-206ENST00000584878 POTEJP0CG39 1038 aa13.39□□□□□ -0.27
NLK-206ENST00000584878 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
NLK-206ENST00000584878 PLCG2P16885 1265 aa13.38□□□□□ -0.27
NLK-206ENST00000584878 EFCAB3Q8N7B9 438 aa13.38□□□□□ -0.27
NLK-206ENST00000584878 STK25O00506 426 aa13.37□□□□□ -0.27
NLK-206ENST00000584878 STK24Q9Y6E0 443 aa13.36□□□□□ -0.27
NLK-206ENST00000584878 RTN4Q9NQC3 1192 aaKnown RBP13.35□□□□□ -0.27
NLK-206ENST00000584878 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
NLK-206ENST00000584878 OCEL1Q9H607 264 aa13.34□□□□□ -0.27
NLK-206ENST00000584878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
NLK-206ENST00000584878 PDCD7Q8N8D1 485 aaKnown RBP13.33□□□□□ -0.28
NLK-206ENST00000584878 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
NLK-206ENST00000584878 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
NLK-206ENST00000584878 DPY19L2Q6NUT2 758 aa13.27□□□□□ -0.29
NLK-206ENST00000584878 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
NLK-206ENST00000584878 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
NLK-206ENST00000584878 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
NLK-206ENST00000584878 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
NLK-206ENST00000584878 HS6ST3Q8IZP7 471 aa13.21□□□□□ -0.29
NLK-206ENST00000584878 SOX12O15370 315 aa13.2□□□□□ -0.3
NLK-206ENST00000584878 MS4A4AQ96JQ5 239 aa13.2□□□□□ -0.3
NLK-206ENST00000584878 MFRPQ9BY79 579 aa13.19□□□□□ -0.3
NLK-206ENST00000584878 SCUBE2Q9NQ36 999 aa13.19□□□□□ -0.3
NLK-206ENST00000584878 MAMSTRQ6ZN01 415 aa13.18□□□□□ -0.3
NLK-206ENST00000584878 FBXO22Q8NEZ5 403 aa13.16□□□□□ -0.3
NLK-206ENST00000584878 NLRP6P59044 892 aa13.13□□□□□ -0.31
NLK-206ENST00000584878 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
NLK-206ENST00000584878 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
NLK-206ENST00000584878 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
NLK-206ENST00000584878 G3V3G9 751 aa13.07□□□□□ -0.32
NLK-206ENST00000584878 C3orf67Q6ZVT6 689 aa13.07□□□□□ -0.32
NLK-206ENST00000584878 SLAIN1Q8ND83 568 aa13.07□□□□□ -0.32
NLK-206ENST00000584878 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
NLK-206ENST00000584878 POTEMA6NI47 508 aa13.05□□□□□ -0.32
NLK-206ENST00000584878 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
NLK-206ENST00000584878 PPP1R37O75864 691 aa13.02□□□□□ -0.33
NLK-206ENST00000584878 TMEM121BQ9BXQ6 578 aaPredicted RBP13.02□□□□□ -0.33
NLK-206ENST00000584878 DNAJC5Q9H3Z4 198 aa13.01□□□□□ -0.33
NLK-206ENST00000584878 POTEGQ6S5H5 508 aa12.99□□□□□ -0.33
NLK-206ENST00000584878 TMEM92Q6UXU6 159 aa12.95□□□□□ -0.34
NLK-206ENST00000584878 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
NLK-206ENST00000584878 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
NLK-206ENST00000584878 FAM163AQ96GL9 167 aaPredicted RBP12.89□□□□□ -0.35
NLK-206ENST00000584878 LCE2DQ5TA82 110 aaPredicted RBP12.86□□□□□ -0.35
NLK-206ENST00000584878 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms