RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
PPP4R1-229ENST00000584754 TSPYL2Q9H2G4 693 aaPredicted RBP10.45□□□□□ -0.74
PPP4R1-229ENST00000584754 RASEFQ8IZ41 740 aa10.44□□□□□ -0.74
PPP4R1-229ENST00000584754 NUBP1P53384 320 aa10.41□□□□□ -0.74
PPP4R1-229ENST00000584754 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-229ENST00000584754 PLSCR2Q9NRY7 297 aa10.37□□□□□ -0.75
PPP4R1-229ENST00000584754 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
PPP4R1-229ENST00000584754 MS4A3Q96HJ5 214 aa10.35□□□□□ -0.75
PPP4R1-229ENST00000584754 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
PPP4R1-229ENST00000584754 POTEB2H3BUK9 544 aa10.33□□□□□ -0.76
PPP4R1-229ENST00000584754 DCAF8Q5TAQ9 597 aa10.32□□□□□ -0.76
PPP4R1-229ENST00000584754 SPOCK2Q92563 424 aa10.32□□□□□ -0.76
PPP4R1-229ENST00000584754 METRNQ9UJH8 293 aa10.3□□□□□ -0.76
PPP4R1-229ENST00000584754 CCDC61Q9Y6R9 512 aa10.3□□□□□ -0.76
PPP4R1-229ENST00000584754 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
PPP4R1-229ENST00000584754 ASTLQ6HA08 431 aaPredicted RBP10.28□□□□□ -0.76
PPP4R1-229ENST00000584754 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
PPP4R1-229ENST00000584754 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
PPP4R1-229ENST00000584754 C7P10643 843 aa10.27□□□□□ -0.77
PPP4R1-229ENST00000584754 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
PPP4R1-229ENST00000584754 PYGBP11216 843 aa10.24□□□□□ -0.77
PPP4R1-229ENST00000584754 KIF12Q96FN5 646 aa10.23□□□□□ -0.77
PPP4R1-229ENST00000584754 MAP3K13O43283 966 aa10.22□□□□□ -0.77
PPP4R1-229ENST00000584754 POTEMA6NI47 508 aa10.2□□□□□ -0.78
PPP4R1-229ENST00000584754 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
PPP4R1-229ENST00000584754 MAMSTRQ6ZN01 415 aa10.2□□□□□ -0.78
PPP4R1-229ENST00000584754 GSE1Q14687 1217 aa10.18□□□□□ -0.78
PPP4R1-229ENST00000584754 POTEGQ6S5H5 508 aa10.17□□□□□ -0.78
PPP4R1-229ENST00000584754 TRPC6Q9Y210 931 aa10.17□□□□□ -0.78
PPP4R1-229ENST00000584754 SCUBE2Q9NQ36 999 aa10.15□□□□□ -0.78
PPP4R1-229ENST00000584754 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
PPP4R1-229ENST00000584754 BMP2KQ9NSY1 1161 aaPredicted RBP10.14□□□□□ -0.79
PPP4R1-229ENST00000584754 PCDHB13Q9Y5F0 798 aa10.14□□□□□ -0.79
PPP4R1-229ENST00000584754 IFNL1Q8IU54 200 aa10.13□□□□□ -0.79
PPP4R1-229ENST00000584754 PCDHB8Q9UN66 801 aa10.13□□□□□ -0.79
PPP4R1-229ENST00000584754 SEC24BO95487 1268 aa10.1□□□□□ -0.79
PPP4R1-229ENST00000584754 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
PPP4R1-229ENST00000584754 TIE1P35590 1138 aa10.09□□□□□ -0.79
PPP4R1-229ENST00000584754 PKD2Q13563 968 aa10.07□□□□□ -0.8
PPP4R1-229ENST00000584754 TTLL13PA6NNM8 815 aa10.05□□□□□ -0.8
PPP4R1-229ENST00000584754 CHRM1P11229 460 aaPredicted RBP10.05□□□□□ -0.8
PPP4R1-229ENST00000584754 POTEFA5A3E0 1075 aa10.03□□□□□ -0.8
PPP4R1-229ENST00000584754 SGIP1Q9BQI5 828 aa10.03□□□□□ -0.8
PPP4R1-229ENST00000584754 ECM2O94769 699 aaPredicted RBP10.02□□□□□ -0.81
PPP4R1-229ENST00000584754 PCDH10Q9P2E7 1040 aa10.01□□□□□ -0.81
PPP4R1-229ENST00000584754 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
PPP4R1-229ENST00000584754 COLQQ9Y215 455 aaPredicted RBP10.01□□□□□ -0.81
PPP4R1-229ENST00000584754 RNF25Q96BH1 459 aaPredicted RBP10□□□□□ -0.81
PPP4R1-229ENST00000584754 TMEM106CQ9BVX2 250 aa9.99□□□□□ -0.81
PPP4R1-229ENST00000584754 ZNF467Q7Z7K2 595 aaPredicted RBP9.97□□□□□ -0.81
PPP4R1-229ENST00000584754 RGL2O15211 777 aa9.96□□□□□ -0.82
PPP4R1-229ENST00000584754 IER5LQ5T953 404 aa9.96□□□□□ -0.82
PPP4R1-229ENST00000584754 TRIM41Q8WV44 630 aa9.96□□□□□ -0.82
PPP4R1-229ENST00000584754 PSEN1P49768 467 aa9.95□□□□□ -0.82
PPP4R1-229ENST00000584754 LCE2DQ5TA82 110 aaPredicted RBP9.94□□□□□ -0.82
PPP4R1-229ENST00000584754 RIOK3O14730 519 aaKnown RBP9.92□□□□□ -0.82
PPP4R1-229ENST00000584754 PLCG2P16885 1265 aa9.91□□□□□ -0.82
PPP4R1-229ENST00000584754 PDAP1Q13442 181 aaKnown RBP9.9□□□□□ -0.82
PPP4R1-229ENST00000584754 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
PPP4R1-229ENST00000584754 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.88□□□□□ -0.83
PPP4R1-229ENST00000584754 ZFP91Q96JP5 570 aaPredicted RBP9.88□□□□□ -0.83
PPP4R1-229ENST00000584754 RTN4Q9NQC3 1192 aaKnown RBP9.87□□□□□ -0.83
PPP4R1-229ENST00000584754 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
PPP4R1-229ENST00000584754 VGFO15240 615 aaPredicted RBP9.83□□□□□ -0.84
PPP4R1-229ENST00000584754 CDAN1Q8IWY9 1227 aa9.82□□□□□ -0.84
PPP4R1-229ENST00000584754 IRX5P78411 483 aaPredicted RBP9.8□□□□□ -0.84
PPP4R1-229ENST00000584754 GOLGA2Q08379 1002 aa9.8□□□□□ -0.84
PPP4R1-229ENST00000584754 BCL11BQ9C0K0 894 aaPredicted RBP9.8□□□□□ -0.84
PPP4R1-229ENST00000584754 OCEL1Q9H607 264 aa9.8□□□□□ -0.84
PPP4R1-229ENST00000584754 STK25O00506 426 aa9.79□□□□□ -0.84
PPP4R1-229ENST00000584754 ST18O60284 1047 aa9.79□□□□□ -0.84
PPP4R1-229ENST00000584754 EFCAB3Q8N7B9 438 aa9.79□□□□□ -0.84
PPP4R1-229ENST00000584754 STK24Q9Y6E0 443 aa9.79□□□□□ -0.84
PPP4R1-229ENST00000584754 DCAF8L2P0C7V8 631 aa9.78□□□□□ -0.84
PPP4R1-229ENST00000584754 MKRN3Q13064 507 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-229ENST00000584754 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-229ENST00000584754 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-229ENST00000584754 CHGAP10645 457 aaKnown RBP9.74□□□□□ -0.85
PPP4R1-229ENST00000584754 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.74□□□□□ -0.851e-6■■■□□ 18.5
PPP4R1-229ENST00000584754 DPY19L2Q6NUT2 758 aa9.73□□□□□ -0.85
PPP4R1-229ENST00000584754 SNPHO15079 494 aa9.72□□□□□ -0.85
PPP4R1-229ENST00000584754 TAOK2Q9UL54 1235 aa9.72□□□□□ -0.85
PPP4R1-229ENST00000584754 PDCD7Q8N8D1 485 aaKnown RBP9.7□□□□□ -0.86
PPP4R1-229ENST00000584754 PHF8Q9UPP1 1060 aa9.7□□□□□ -0.86
PPP4R1-229ENST00000584754 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
PPP4R1-229ENST00000584754 MARVELD3Q96A59 401 aa9.66□□□□□ -0.86
PPP4R1-229ENST00000584754 TMEM121BQ9BXQ6 578 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-229ENST00000584754 HS6ST3Q8IZP7 471 aa9.65□□□□□ -0.86
PPP4R1-229ENST00000584754 L3MBTL3Q96JM7 780 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-229ENST00000584754 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
PPP4R1-229ENST00000584754 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
PPP4R1-229ENST00000584754 MFRPQ9BY79 579 aa9.64□□□□□ -0.87
PPP4R1-229ENST00000584754 SOX12O15370 315 aa9.63□□□□□ -0.87
PPP4R1-229ENST00000584754 NKX1-1Q15270 411 aaPredicted RBP9.62□□□□□ -0.87
PPP4R1-229ENST00000584754 FBXO22Q8NEZ5 403 aa9.61□□□□□ -0.87
PPP4R1-229ENST00000584754 G3V3G9 751 aa9.58□□□□□ -0.88
PPP4R1-229ENST00000584754 EMP3P54852 163 aa9.58□□□□□ -0.88
PPP4R1-229ENST00000584754 NLRP6P59044 892 aa9.58□□□□□ -0.88
PPP4R1-229ENST00000584754 PPP1R37O75864 691 aa9.57□□□□□ -0.88
PPP4R1-229ENST00000584754 SPNS2Q8IVW8 549 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms