RNA–Protein interactions for RNA: ENST00000584130.1

RIOK3-209, Transcript of RIO kinase 3, humanhuman

TSL 4

Gene RIOK3, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-209ENST00000584130 VASPP50552 380 aaPredicted RBP13.61□□□□□ -0.23
RIOK3-209ENST00000584130 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
RIOK3-209ENST00000584130 NUBP1P53384 320 aa13.58□□□□□ -0.24
RIOK3-209ENST00000584130 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
RIOK3-209ENST00000584130 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
RIOK3-209ENST00000584130 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
RIOK3-209ENST00000584130 MAP3K13O43283 966 aa13.44□□□□□ -0.26
RIOK3-209ENST00000584130 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
RIOK3-209ENST00000584130 LHX8Q68G74 356 aa13.4□□□□□ -0.26
RIOK3-209ENST00000584130 ASTLQ6HA08 431 aaPredicted RBP13.4□□□□□ -0.26
RIOK3-209ENST00000584130 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
RIOK3-209ENST00000584130 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
RIOK3-209ENST00000584130 DCAF8Q5TAQ9 597 aa13.35□□□□□ -0.27
RIOK3-209ENST00000584130 IFNLR1Q8IU57 520 aaPredicted RBP13.35□□□□□ -0.27
RIOK3-209ENST00000584130 PCDHB13Q9Y5F0 798 aa13.35□□□□□ -0.27
RIOK3-209ENST00000584130 PELP1Q8IZL8 1130 aaKnown RBP13.34□□□□□ -0.27
RIOK3-209ENST00000584130 TRPC6Q9Y210 931 aa13.34□□□□□ -0.27
RIOK3-209ENST00000584130 BMP2KQ9NSY1 1161 aaPredicted RBP13.32□□□□□ -0.28
RIOK3-209ENST00000584130 TIE1P35590 1138 aa13.31□□□□□ -0.28
RIOK3-209ENST00000584130 GSE1Q14687 1217 aa13.3□□□□□ -0.28
RIOK3-209ENST00000584130 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
RIOK3-209ENST00000584130 PYGBP11216 843 aa13.28□□□□□ -0.28
RIOK3-209ENST00000584130 ATN1P54259 1190 aaPredicted RBP13.28□□□□□ -0.28
RIOK3-209ENST00000584130 IFNL1Q8IU54 200 aa13.28□□□□□ -0.28
RIOK3-209ENST00000584130 SLC39A7Q92504 469 aa13.27□□□□□ -0.29
RIOK3-209ENST00000584130 METRNQ9UJH8 293 aa13.27□□□□□ -0.29
RIOK3-209ENST00000584130 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
RIOK3-209ENST00000584130 C7P10643 843 aa13.23□□□□□ -0.29
RIOK3-209ENST00000584130 POTEB2H3BUK9 544 aa13.16□□□□□ -0.3
RIOK3-209ENST00000584130 TMEM106CQ9BVX2 250 aa13.16□□□□□ -0.3
RIOK3-209ENST00000584130 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
RIOK3-209ENST00000584130 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
RIOK3-209ENST00000584130 CIZ1Q9ULV3 898 aaPredicted RBP13.15□□□□□ -0.3
RIOK3-209ENST00000584130 PCDHB8Q9UN66 801 aa13.15□□□□□ -0.3
RIOK3-209ENST00000584130 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
RIOK3-209ENST00000584130 IER5LQ5T953 404 aa13.1□□□□□ -0.31
RIOK3-209ENST00000584130 POTEFA5A3E0 1075 aa13.08□□□□□ -0.32
RIOK3-209ENST00000584130 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
RIOK3-209ENST00000584130 SEC24BO95487 1268 aa13.04□□□□□ -0.32
RIOK3-209ENST00000584130 COLQQ9Y215 455 aaPredicted RBP13.04□□□□□ -0.32
RIOK3-209ENST00000584130 POTEJP0CG39 1038 aa13.03□□□□□ -0.32
RIOK3-209ENST00000584130 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
RIOK3-209ENST00000584130 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
RIOK3-209ENST00000584130 PSEN1P49768 467 aa12.98□□□□□ -0.33
RIOK3-209ENST00000584130 PDAP1Q13442 181 aaKnown RBP12.98□□□□□ -0.33
RIOK3-209ENST00000584130 PLCG2P16885 1265 aa12.96□□□□□ -0.33
RIOK3-209ENST00000584130 IRX5P78411 483 aaPredicted RBP12.96□□□□□ -0.33
RIOK3-209ENST00000584130 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
RIOK3-209ENST00000584130 RTN4Q9NQC3 1192 aaKnown RBP12.93□□□□□ -0.34
RIOK3-209ENST00000584130 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
RIOK3-209ENST00000584130 OCEL1Q9H607 264 aa12.89□□□□□ -0.35
RIOK3-209ENST00000584130 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
RIOK3-209ENST00000584130 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
RIOK3-209ENST00000584130 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
RIOK3-209ENST00000584130 RIOK3O14730 519 aaKnown RBP12.84□□□□□ -0.35
RIOK3-209ENST00000584130 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
RIOK3-209ENST00000584130 CABP2Q9NPB3 220 aa12.83□□□□□ -0.36
RIOK3-209ENST00000584130 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.364e-7■■■■□ 26.2
RIOK3-209ENST00000584130 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
RIOK3-209ENST00000584130 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
RIOK3-209ENST00000584130 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.73□□□□□ -0.37
RIOK3-209ENST00000584130 ECM2O94769 699 aaPredicted RBP12.73□□□□□ -0.37
RIOK3-209ENST00000584130 ZFP91Q96JP5 570 aaPredicted RBP12.73□□□□□ -0.37
RIOK3-209ENST00000584130 PKD2Q13563 968 aa12.72□□□□□ -0.37
RIOK3-209ENST00000584130 SLAIN1Q8ND83 568 aa12.72□□□□□ -0.37
RIOK3-209ENST00000584130 L3MBTL3Q96JM7 780 aaPredicted RBP12.7□□□□□ -0.38
RIOK3-209ENST00000584130 EFCAB3Q8N7B9 438 aa12.69□□□□□ -0.38
RIOK3-209ENST00000584130 TAOK2Q9UL54 1235 aa12.69□□□□□ -0.38
RIOK3-209ENST00000584130 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.68□□□□□ -0.38
RIOK3-209ENST00000584130 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
RIOK3-209ENST00000584130 LCE2DQ5TA82 110 aaPredicted RBP12.64□□□□□ -0.39
RIOK3-209ENST00000584130 DPY19L2Q6NUT2 758 aa12.64□□□□□ -0.39
RIOK3-209ENST00000584130 RGL2O15211 777 aa12.62□□□□□ -0.39
RIOK3-209ENST00000584130 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
RIOK3-209ENST00000584130 POTEMA6NI47 508 aa12.61□□□□□ -0.39
RIOK3-209ENST00000584130 FAM163AQ96GL9 167 aaPredicted RBP12.61□□□□□ -0.39
RIOK3-209ENST00000584130 SOX12O15370 315 aa12.6□□□□□ -0.39
RIOK3-209ENST00000584130 BOLA1Q9Y3E2 137 aa12.6□□□□□ -0.39
RIOK3-209ENST00000584130 G3V3G9 751 aa12.59□□□□□ -0.39
RIOK3-209ENST00000584130 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
RIOK3-209ENST00000584130 STK24Q9Y6E0 443 aa12.58□□□□□ -0.4
RIOK3-209ENST00000584130 STK25O00506 426 aa12.57□□□□□ -0.4
RIOK3-209ENST00000584130 PHF8Q9UPP1 1060 aa12.55□□□□□ -0.4
RIOK3-209ENST00000584130 MS4A4AQ96JQ5 239 aa12.54□□□□□ -0.4
RIOK3-209ENST00000584130 TMEM121BQ9BXQ6 578 aaPredicted RBP12.52□□□□□ -0.41
RIOK3-209ENST00000584130 SNPHO15079 494 aa12.51□□□□□ -0.41
RIOK3-209ENST00000584130 ST18O60284 1047 aa12.49□□□□□ -0.41
RIOK3-209ENST00000584130 NLRP6P59044 892 aa12.49□□□□□ -0.41
RIOK3-209ENST00000584130 MICALL2Q8IY33 904 aa12.49□□□□□ -0.41
RIOK3-209ENST00000584130 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
RIOK3-209ENST00000584130 MFRPQ9BY79 579 aa12.46□□□□□ -0.41
RIOK3-209ENST00000584130 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
RIOK3-209ENST00000584130 PCDH10Q9P2E7 1040 aa12.39□□□□□ -0.43
RIOK3-209ENST00000584130 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
RIOK3-209ENST00000584130 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
RIOK3-209ENST00000584130 CHGAP10645 457 aaKnown RBP12.31□□□□□ -0.44
RIOK3-209ENST00000584130 MARVELD3Q96A59 401 aa12.31□□□□□ -0.44
RIOK3-209ENST00000584130 DOK7Q18PE1 504 aa12.3□□□□□ -0.44
RIOK3-209ENST00000584130 PLSCR2Q9NRY7 297 aa12.29□□□□□ -0.44
RIOK3-209ENST00000584130 EMP3P54852 163 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms