RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
TTC39C-208ENST00000584095 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
TTC39C-208ENST00000584095 SPRYD3Q8NCJ5 442 aa13.35□□□□□ -0.27
TTC39C-208ENST00000584095 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
TTC39C-208ENST00000584095 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
TTC39C-208ENST00000584095 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
TTC39C-208ENST00000584095 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
TTC39C-208ENST00000584095 RIOK3O14730 519 aaKnown RBP13.28□□□□□ -0.28
TTC39C-208ENST00000584095 TSHZ2Q9NRE2 1034 aa13.26□□□□□ -0.29
TTC39C-208ENST00000584095 DNAJC5Q9H3Z4 198 aa13.25□□□□□ -0.29
TTC39C-208ENST00000584095 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
TTC39C-208ENST00000584095 BCANQ96GW7 911 aa13.23□□□□□ -0.29
TTC39C-208ENST00000584095 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
TTC39C-208ENST00000584095 NKX1-1Q15270 411 aaPredicted RBP13.19□□□□□ -0.3
TTC39C-208ENST00000584095 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
TTC39C-208ENST00000584095 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
TTC39C-208ENST00000584095 PYGBP11216 843 aa13.15□□□□□ -0.3
TTC39C-208ENST00000584095 STK25O00506 426 aa13.14□□□□□ -0.31
TTC39C-208ENST00000584095 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
TTC39C-208ENST00000584095 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.09□□□□□ -0.31
TTC39C-208ENST00000584095 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
TTC39C-208ENST00000584095 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.32
TTC39C-208ENST00000584095 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
TTC39C-208ENST00000584095 BCL11BQ9C0K0 894 aaPredicted RBP13.07□□□□□ -0.32
TTC39C-208ENST00000584095 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
TTC39C-208ENST00000584095 STK24Q9Y6E0 443 aa13.05□□□□□ -0.32
TTC39C-208ENST00000584095 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
TTC39C-208ENST00000584095 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
TTC39C-208ENST00000584095 PRKCSHP14314 528 aaPredicted RBP12.97□□□□□ -0.33
TTC39C-208ENST00000584095 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
TTC39C-208ENST00000584095 CCDC61Q9Y6R9 512 aa12.95□□□□□ -0.34
TTC39C-208ENST00000584095 PCDHB8Q9UN66 801 aa12.92□□□□□ -0.34
TTC39C-208ENST00000584095 PCDHB13Q9Y5F0 798 aa12.92□□□□□ -0.34
TTC39C-208ENST00000584095 PDAP1Q13442 181 aaKnown RBP12.9□□□□□ -0.34
TTC39C-208ENST00000584095 RYDENQ9NUL5 291 aaKnown RBP12.9□□□□□ -0.34
TTC39C-208ENST00000584095 CHRDL2Q6WN34 429 aa12.87□□□□□ -0.35
TTC39C-208ENST00000584095 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
TTC39C-208ENST00000584095 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
TTC39C-208ENST00000584095 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
TTC39C-208ENST00000584095 PSEN1P49768 467 aa12.83□□□□□ -0.36
TTC39C-208ENST00000584095 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
TTC39C-208ENST00000584095 NBR1Q14596 966 aa12.81□□□□□ -0.36
TTC39C-208ENST00000584095 IFNL1Q8IU54 200 aa12.8□□□□□ -0.36
TTC39C-208ENST00000584095 MAP3K13O43283 966 aa12.77□□□□□ -0.37
TTC39C-208ENST00000584095 KIF12Q96FN5 646 aa12.77□□□□□ -0.37
TTC39C-208ENST00000584095 MFRPQ9BY79 579 aa12.76□□□□□ -0.37
TTC39C-208ENST00000584095 CADPS2Q86UW7 1296 aa12.73□□□□□ -0.37
TTC39C-208ENST00000584095 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
TTC39C-208ENST00000584095 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
TTC39C-208ENST00000584095 EFCAB3Q8N7B9 438 aa12.68□□□□□ -0.38
TTC39C-208ENST00000584095 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
TTC39C-208ENST00000584095 PHF12Q96QT6 1004 aa12.66□□□□□ -0.38
TTC39C-208ENST00000584095 FBXO22Q8NEZ5 403 aa12.65□□□□□ -0.38
TTC39C-208ENST00000584095 PPP1R37O75864 691 aa12.63□□□□□ -0.39
TTC39C-208ENST00000584095 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
TTC39C-208ENST00000584095 SOX12O15370 315 aa12.62□□□□□ -0.39
TTC39C-208ENST00000584095 NLRP6P59044 892 aa12.62□□□□□ -0.39
TTC39C-208ENST00000584095 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
TTC39C-208ENST00000584095 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
TTC39C-208ENST00000584095 WDR70Q9NW82 654 aa12.58□□□□□ -0.4
TTC39C-208ENST00000584095 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
TTC39C-208ENST00000584095 C19orf67A6NJJ6 358 aa12.52□□□□□ -0.41
TTC39C-208ENST00000584095 MS4A3Q96HJ5 214 aa12.52□□□□□ -0.41
TTC39C-208ENST00000584095 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
TTC39C-208ENST00000584095 TMEM106CQ9BVX2 250 aa12.51□□□□□ -0.41
TTC39C-208ENST00000584095 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
TTC39C-208ENST00000584095 NCKAP5LQ9HCH0 1330 aa12.44□□□□□ -0.42
TTC39C-208ENST00000584095 E2F4Q16254 413 aa12.41□□□□□ -0.42
TTC39C-208ENST00000584095 TIE1P35590 1138 aa12.4□□□□□ -0.42
TTC39C-208ENST00000584095 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
TTC39C-208ENST00000584095 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.42
TTC39C-208ENST00000584095 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
TTC39C-208ENST00000584095 LARP6Q9BRS8 491 aaKnown RBP12.37□□□□□ -0.43
TTC39C-208ENST00000584095 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
TTC39C-208ENST00000584095 MFSD10Q14728 455 aa12.36□□□□□ -0.43
TTC39C-208ENST00000584095 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
TTC39C-208ENST00000584095 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.36□□□□□ -0.43
TTC39C-208ENST00000584095 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
TTC39C-208ENST00000584095 PDE4AP27815 886 aa12.35□□□□□ -0.43
TTC39C-208ENST00000584095 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
TTC39C-208ENST00000584095 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
TTC39C-208ENST00000584095 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
TTC39C-208ENST00000584095 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.44
TTC39C-208ENST00000584095 TRIM35Q9UPQ4 493 aa12.3□□□□□ -0.44
TTC39C-208ENST00000584095 SEMA3EO15041 775 aa12.29□□□□□ -0.44
TTC39C-208ENST00000584095 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
TTC39C-208ENST00000584095 EVX2Q03828 476 aa12.26□□□□□ -0.45
TTC39C-208ENST00000584095 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
TTC39C-208ENST00000584095 CAMK2BQ13554 666 aa12.25□□□□□ -0.45
TTC39C-208ENST00000584095 HAX1O00165 279 aa12.24□□□□□ -0.45
TTC39C-208ENST00000584095 ARIH1Q9Y4X5 557 aaPredicted RBP12.24□□□□□ -0.45
TTC39C-208ENST00000584095 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
TTC39C-208ENST00000584095 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
TTC39C-208ENST00000584095 ATN1P54259 1190 aaPredicted RBP12.19□□□□□ -0.46
TTC39C-208ENST00000584095 PPP1R15BQ5SWA1 713 aa12.19□□□□□ -0.46
TTC39C-208ENST00000584095 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
TTC39C-208ENST00000584095 CLCN6P51797 869 aa12.18□□□□□ -0.46
TTC39C-208ENST00000584095 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
TTC39C-208ENST00000584095 ZC3H15Q8WU90 426 aaKnown RBP12.18□□□□□ -0.46
TTC39C-208ENST00000584095 ATMINO43313 823 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms