RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 GALR2O43603 387 aaPredicted RBP14.82□□□□□ -0.04
SMARCE1-219ENST00000583294 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
SMARCE1-219ENST00000583294 KLHL34Q8N239 644 aa14.76□□□□□ -0.05
SMARCE1-219ENST00000583294 DCBLD2Q96PD2 775 aa14.76□□□□□ -0.05
SMARCE1-219ENST00000583294 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
SMARCE1-219ENST00000583294 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
SMARCE1-219ENST00000583294 NUBP1P53384 320 aa14.71□□□□□ -0.05
SMARCE1-219ENST00000583294 MS4A3Q96HJ5 214 aa14.68□□□□□ -0.06
SMARCE1-219ENST00000583294 KIF12Q96FN5 646 aa14.65□□□□□ -0.06
SMARCE1-219ENST00000583294 SPOCK2Q92563 424 aa14.63□□□□□ -0.07
SMARCE1-219ENST00000583294 MAP3K13O43283 966 aa14.6□□□□□ -0.07
SMARCE1-219ENST00000583294 LHX8Q68G74 356 aa14.58□□□□□ -0.08
SMARCE1-219ENST00000583294 FAM212AQ96EL1 285 aa14.55□□□□□ -0.08
SMARCE1-219ENST00000583294 PELP1Q8IZL8 1130 aaKnown RBP14.54□□□□□ -0.08
SMARCE1-219ENST00000583294 DCAF8Q5TAQ9 597 aa14.53□□□□□ -0.08
SMARCE1-219ENST00000583294 TRPC6Q9Y210 931 aa14.52□□□□□ -0.09
SMARCE1-219ENST00000583294 PKD2Q13563 968 aa14.51□□□□□ -0.09
SMARCE1-219ENST00000583294 ATMINO43313 823 aaPredicted RBP14.5□□□□□ -0.09
SMARCE1-219ENST00000583294 ASTLQ6HA08 431 aaPredicted RBP14.49□□□□□ -0.09
SMARCE1-219ENST00000583294 PCDHB13Q9Y5F0 798 aa14.46□□□□□ -0.09
SMARCE1-219ENST00000583294 ATN1P54259 1190 aaPredicted RBP14.43□□□□□ -0.1
SMARCE1-219ENST00000583294 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
SMARCE1-219ENST00000583294 PYGBP11216 843 aa14.42□□□□□ -0.1
SMARCE1-219ENST00000583294 SGIP1Q9BQI5 828 aa14.42□□□□□ -0.1
SMARCE1-219ENST00000583294 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
SMARCE1-219ENST00000583294 IFNL1Q8IU54 200 aa14.4□□□□□ -0.1
SMARCE1-219ENST00000583294 CIZ1Q9ULV3 898 aaPredicted RBP14.4□□□□□ -0.1
SMARCE1-219ENST00000583294 ECM2O94769 699 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-219ENST00000583294 TIE1P35590 1138 aa14.38□□□□□ -0.11
SMARCE1-219ENST00000583294 POTEB2H3BUK9 544 aa14.37□□□□□ -0.11
SMARCE1-219ENST00000583294 GSE1Q14687 1217 aa14.35□□□□□ -0.11
SMARCE1-219ENST00000583294 SLC39A7Q92504 469 aa14.35□□□□□ -0.11
SMARCE1-219ENST00000583294 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
SMARCE1-219ENST00000583294 TTLL13PA6NNM8 815 aa14.34□□□□□ -0.11
SMARCE1-219ENST00000583294 C7P10643 843 aa14.33□□□□□ -0.12
SMARCE1-219ENST00000583294 PCDHB8Q9UN66 801 aa14.29□□□□□ -0.12
SMARCE1-219ENST00000583294 TMEM106CQ9BVX2 250 aa14.25□□□□□ -0.13
SMARCE1-219ENST00000583294 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
SMARCE1-219ENST00000583294 SLC24A1O60721 1099 aa14.24□□□□□ -0.13
SMARCE1-219ENST00000583294 POTEFA5A3E0 1075 aa14.23□□□□□ -0.13
SMARCE1-219ENST00000583294 RGL2O15211 777 aa14.23□□□□□ -0.13
SMARCE1-219ENST00000583294 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
SMARCE1-219ENST00000583294 CHRM1P11229 460 aaPredicted RBP14.22□□□□□ -0.13
SMARCE1-219ENST00000583294 POTEJP0CG39 1038 aa14.21□□□□□ -0.13
SMARCE1-219ENST00000583294 COLQQ9Y215 455 aaPredicted RBP14.18□□□□□ -0.14
SMARCE1-219ENST00000583294 ZNF467Q7Z7K2 595 aaPredicted RBP14.15□□□□□ -0.14
SMARCE1-219ENST00000583294 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
SMARCE1-219ENST00000583294 SEC24BO95487 1268 aa14.14□□□□□ -0.15
SMARCE1-219ENST00000583294 IER5LQ5T953 404 aa14.12□□□□□ -0.15
SMARCE1-219ENST00000583294 PSEN1P49768 467 aa14.07□□□□□ -0.16
SMARCE1-219ENST00000583294 RNF25Q96BH1 459 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-219ENST00000583294 IRX5P78411 483 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-219ENST00000583294 MAMSTRQ6ZN01 415 aa14.03□□□□□ -0.16
SMARCE1-219ENST00000583294 CHGAP10645 457 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-219ENST00000583294 PLCG2P16885 1265 aa14.01□□□□□ -0.17
SMARCE1-219ENST00000583294 PLCB2Q00722 1185 aa14.01□□□□□ -0.17
SMARCE1-219ENST00000583294 PDAP1Q13442 181 aaKnown RBP14□□□□□ -0.17
SMARCE1-219ENST00000583294 SCUBE2Q9NQ36 999 aa13.99□□□□□ -0.17
SMARCE1-219ENST00000583294 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
SMARCE1-219ENST00000583294 BBXQ8WY36 941 aaPredicted RBP13.97□□□□□ -0.17
SMARCE1-219ENST00000583294 OCEL1Q9H607 264 aa13.97□□□□□ -0.17
SMARCE1-219ENST00000583294 GOLGA2Q08379 1002 aa13.95□□□□□ -0.18
SMARCE1-219ENST00000583294 MKRN3Q13064 507 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-219ENST00000583294 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.94□□□□□ -0.18
SMARCE1-219ENST00000583294 CABP2Q9NPB3 220 aa13.9□□□□□ -0.18
SMARCE1-219ENST00000583294 HAP1P54257 671 aaPredicted RBP13.88□□□□□ -0.19
SMARCE1-219ENST00000583294 PAXIP1Q6ZW49 1069 aaPredicted RBP13.88□□□□□ -0.19
SMARCE1-219ENST00000583294 TAOK2Q9UL54 1235 aa13.88□□□□□ -0.19
SMARCE1-219ENST00000583294 HS6ST3Q8IZP7 471 aa13.87□□□□□ -0.19
SMARCE1-219ENST00000583294 PDCD7Q8N8D1 485 aaKnown RBP13.87□□□□□ -0.19
SMARCE1-219ENST00000583294 CFAP44Q96MT7 982 aa13.87□□□□□ -0.19
SMARCE1-219ENST00000583294 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.192e-8■■■□□ 16.8
SMARCE1-219ENST00000583294 VGFO15240 615 aaPredicted RBP13.86□□□□□ -0.19
SMARCE1-219ENST00000583294 STK25O00506 426 aa13.83□□□□□ -0.2
SMARCE1-219ENST00000583294 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-219ENST00000583294 ZFP91Q96JP5 570 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-219ENST00000583294 SLAIN1Q8ND83 568 aa13.8□□□□□ -0.2
SMARCE1-219ENST00000583294 DPY19L2Q6NUT2 758 aa13.79□□□□□ -0.2
SMARCE1-219ENST00000583294 SPRYD3Q8NCJ5 442 aa13.79□□□□□ -0.2
SMARCE1-219ENST00000583294 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
SMARCE1-219ENST00000583294 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-219ENST00000583294 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
SMARCE1-219ENST00000583294 STK24Q9Y6E0 443 aa13.77□□□□□ -0.21
SMARCE1-219ENST00000583294 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-219ENST00000583294 LCE2DQ5TA82 110 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-219ENST00000583294 L3MBTL3Q96JM7 780 aaPredicted RBP13.73□□□□□ -0.21
SMARCE1-219ENST00000583294 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.73□□□□□ -0.21
SMARCE1-219ENST00000583294 NKX1-1Q15270 411 aaPredicted RBP13.71□□□□□ -0.21
SMARCE1-219ENST00000583294 POTEMA6NI47 508 aa13.7□□□□□ -0.22
SMARCE1-219ENST00000583294 DNAJC5Q9H3Z4 198 aa13.7□□□□□ -0.22
SMARCE1-219ENST00000583294 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
SMARCE1-219ENST00000583294 C3orf67Q6ZVT6 689 aa13.66□□□□□ -0.22
SMARCE1-219ENST00000583294 TSHZ2Q9NRE2 1034 aa13.63□□□□□ -0.23
SMARCE1-219ENST00000583294 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
SMARCE1-219ENST00000583294 SOX12O15370 315 aa13.62□□□□□ -0.23
SMARCE1-219ENST00000583294 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
SMARCE1-219ENST00000583294 GTPBP6O43824 516 aaPredicted RBP13.6□□□□□ -0.23
SMARCE1-219ENST00000583294 G3V3G9 751 aa13.59□□□□□ -0.23
SMARCE1-219ENST00000583294 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
SMARCE1-219ENST00000583294 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms