RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
PTPRM-215ENST00000583289 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
PTPRM-215ENST00000583289 NUBP1P53384 320 aa11.28□□□□□ -0.6
PTPRM-215ENST00000583289 FAM212AQ96EL1 285 aa11.27□□□□□ -0.61
PTPRM-215ENST00000583289 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
PTPRM-215ENST00000583289 KIF12Q96FN5 646 aa11.24□□□□□ -0.61
PTPRM-215ENST00000583289 KLHL34Q8N239 644 aa11.22□□□□□ -0.61
PTPRM-215ENST00000583289 MAP3K13O43283 966 aa11.17□□□□□ -0.62
PTPRM-215ENST00000583289 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
PTPRM-215ENST00000583289 SGIP1Q9BQI5 828 aa11.16□□□□□ -0.62
PTPRM-215ENST00000583289 DCAF8Q5TAQ9 597 aa11.15□□□□□ -0.62
PTPRM-215ENST00000583289 LHX8Q68G74 356 aa11.15□□□□□ -0.62
PTPRM-215ENST00000583289 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
PTPRM-215ENST00000583289 ATMINO43313 823 aaPredicted RBP11.11□□□□□ -0.63
PTPRM-215ENST00000583289 GSE1Q14687 1217 aa11.11□□□□□ -0.63
PTPRM-215ENST00000583289 IFNLR1Q8IU57 520 aaPredicted RBP11.1□□□□□ -0.63
PTPRM-215ENST00000583289 TIE1P35590 1138 aa11.09□□□□□ -0.63
PTPRM-215ENST00000583289 SPOCK2Q92563 424 aa11.08□□□□□ -0.64
PTPRM-215ENST00000583289 PELP1Q8IZL8 1130 aaKnown RBP11.06□□□□□ -0.64
PTPRM-215ENST00000583289 SLC39A7Q92504 469 aa11.06□□□□□ -0.64
PTPRM-215ENST00000583289 BMP2KQ9NSY1 1161 aaPredicted RBP11.06□□□□□ -0.64
PTPRM-215ENST00000583289 TRPC6Q9Y210 931 aa11.05□□□□□ -0.64
PTPRM-215ENST00000583289 C7P10643 843 aa11.04□□□□□ -0.64
PTPRM-215ENST00000583289 PYGBP11216 843 aa11.04□□□□□ -0.64
PTPRM-215ENST00000583289 ATN1P54259 1190 aaPredicted RBP11.04□□□□□ -0.64
PTPRM-215ENST00000583289 IFNL1Q8IU54 200 aa11.04□□□□□ -0.64
PTPRM-215ENST00000583289 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
PTPRM-215ENST00000583289 TTLL13PA6NNM8 815 aa11□□□□□ -0.65
PTPRM-215ENST00000583289 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
PTPRM-215ENST00000583289 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-215ENST00000583289 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-215ENST00000583289 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
PTPRM-215ENST00000583289 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
PTPRM-215ENST00000583289 IER5LQ5T953 404 aa10.93□□□□□ -0.66
PTPRM-215ENST00000583289 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
PTPRM-215ENST00000583289 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
PTPRM-215ENST00000583289 TRIM41Q8WV44 630 aa10.9□□□□□ -0.66
PTPRM-215ENST00000583289 SEC24BO95487 1268 aa10.88□□□□□ -0.67
PTPRM-215ENST00000583289 MAMSTRQ6ZN01 415 aa10.86□□□□□ -0.67
PTPRM-215ENST00000583289 OTUD5Q96G74 571 aa10.85□□□□□ -0.67
PTPRM-215ENST00000583289 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
PTPRM-215ENST00000583289 COLQQ9Y215 455 aaPredicted RBP10.82□□□□□ -0.68
PTPRM-215ENST00000583289 PSEN1P49768 467 aa10.81□□□□□ -0.68
PTPRM-215ENST00000583289 PDAP1Q13442 181 aaKnown RBP10.81□□□□□ -0.68
PTPRM-215ENST00000583289 GOLGA2Q08379 1002 aa10.8□□□□□ -0.68
PTPRM-215ENST00000583289 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
PTPRM-215ENST00000583289 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
PTPRM-215ENST00000583289 PLCG2P16885 1265 aa10.79□□□□□ -0.68
PTPRM-215ENST00000583289 IRX5P78411 483 aaPredicted RBP10.77□□□□□ -0.69
PTPRM-215ENST00000583289 MKRN3Q13064 507 aaKnown RBP10.75□□□□□ -0.69
PTPRM-215ENST00000583289 OCEL1Q9H607 264 aa10.75□□□□□ -0.69
PTPRM-215ENST00000583289 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
PTPRM-215ENST00000583289 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
PTPRM-215ENST00000583289 PDCD7Q8N8D1 485 aaKnown RBP10.66□□□□□ -0.7
PTPRM-215ENST00000583289 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
PTPRM-215ENST00000583289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.66□□□□□ -0.71e-7■■□□□ 13.2
PTPRM-215ENST00000583289 VGFO15240 615 aaPredicted RBP10.65□□□□□ -0.7
PTPRM-215ENST00000583289 TAOK2Q9UL54 1235 aa10.65□□□□□ -0.7
PTPRM-215ENST00000583289 ILDR1Q86SU0 546 aaPredicted RBP10.62□□□□□ -0.71
PTPRM-215ENST00000583289 L3MBTL3Q96JM7 780 aaPredicted RBP10.62□□□□□ -0.71
PTPRM-215ENST00000583289 ECM2O94769 699 aaPredicted RBP10.61□□□□□ -0.71
PTPRM-215ENST00000583289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.59□□□□□ -0.71
PTPRM-215ENST00000583289 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
PTPRM-215ENST00000583289 ZFP91Q96JP5 570 aaPredicted RBP10.59□□□□□ -0.71
PTPRM-215ENST00000583289 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.58□□□□□ -0.72
PTPRM-215ENST00000583289 PKD2Q13563 968 aa10.57□□□□□ -0.72
PTPRM-215ENST00000583289 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
PTPRM-215ENST00000583289 EFCAB3Q8N7B9 438 aa10.56□□□□□ -0.72
PTPRM-215ENST00000583289 G3V3G9 751 aa10.54□□□□□ -0.72
PTPRM-215ENST00000583289 SOX12O15370 315 aa10.53□□□□□ -0.72
PTPRM-215ENST00000583289 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
PTPRM-215ENST00000583289 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
PTPRM-215ENST00000583289 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
PTPRM-215ENST00000583289 RGL2O15211 777 aa10.49□□□□□ -0.73
PTPRM-215ENST00000583289 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
PTPRM-215ENST00000583289 POTEMA6NI47 508 aa10.48□□□□□ -0.73
PTPRM-215ENST00000583289 STK25O00506 426 aa10.47□□□□□ -0.73
PTPRM-215ENST00000583289 SNPHO15079 494 aa10.47□□□□□ -0.73
PTPRM-215ENST00000583289 STK24Q9Y6E0 443 aa10.47□□□□□ -0.73
PTPRM-215ENST00000583289 POTEGQ6S5H5 508 aa10.46□□□□□ -0.73
PTPRM-215ENST00000583289 LCE2DQ5TA82 110 aaPredicted RBP10.45□□□□□ -0.74
PTPRM-215ENST00000583289 NLRP6P59044 892 aa10.43□□□□□ -0.74
PTPRM-215ENST00000583289 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
PTPRM-215ENST00000583289 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
PTPRM-215ENST00000583289 MS4A4AQ96JQ5 239 aa10.4□□□□□ -0.74
PTPRM-215ENST00000583289 ST18O60284 1047 aa10.38□□□□□ -0.75
PTPRM-215ENST00000583289 MICALL2Q8IY33 904 aa10.38□□□□□ -0.75
PTPRM-215ENST00000583289 FBXO22Q8NEZ5 403 aa10.37□□□□□ -0.75
PTPRM-215ENST00000583289 PCDH10Q9P2E7 1040 aa10.37□□□□□ -0.75
PTPRM-215ENST00000583289 MFRPQ9BY79 579 aa10.36□□□□□ -0.75
PTPRM-215ENST00000583289 HS6ST3Q8IZP7 471 aa10.32□□□□□ -0.76
PTPRM-215ENST00000583289 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
PTPRM-215ENST00000583289 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
PTPRM-215ENST00000583289 TMEM92Q6UXU6 159 aa10.25□□□□□ -0.77
PTPRM-215ENST00000583289 HOXB3P14651 431 aaPredicted RBP10.24□□□□□ -0.77
PTPRM-215ENST00000583289 ZNF710Q8N1W2 664 aa10.24□□□□□ -0.77
PTPRM-215ENST00000583289 RIMBP2O15034 1052 aa10.22□□□□□ -0.77
PTPRM-215ENST00000583289 EMP3P54852 163 aa10.22□□□□□ -0.77
PTPRM-215ENST00000583289 CDAN1Q8IWY9 1227 aa10.22□□□□□ -0.77
PTPRM-215ENST00000583289 MARVELD3Q96A59 401 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms