RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
CDH8-207ENST00000582242 ZBTB47Q9UFB7 747 aaPredicted RBP18.38■□□□□ 0.53
CDH8-207ENST00000582242 ECM2O94769 699 aaPredicted RBP18.37■□□□□ 0.53
CDH8-207ENST00000582242 NPM1P06748 294 aaKnown RBP eCLIP18.37■□□□□ 0.53
CDH8-207ENST00000582242 POTEIP0CG38 1075 aa18.32■□□□□ 0.52
CDH8-207ENST00000582242 PAK3O75914 559 aaPredicted RBP18.31■□□□□ 0.52
CDH8-207ENST00000582242 GALR2O43603 387 aaPredicted RBP18.2■□□□□ 0.5
CDH8-207ENST00000582242 PHF12Q96QT6 1004 aa18.2■□□□□ 0.5
CDH8-207ENST00000582242 DCBLD2Q96PD2 775 aa18.19■□□□□ 0.5
CDH8-207ENST00000582242 RGL2O15211 777 aa18.18■□□□□ 0.5
CDH8-207ENST00000582242 LHX8Q68G74 356 aa18.17■□□□□ 0.5
CDH8-207ENST00000582242 CIZ1Q9ULV3 898 aaPredicted RBP18.16■□□□□ 0.5
CDH8-207ENST00000582242 BBXQ8WY36 941 aaPredicted RBP18.13■□□□□ 0.49
CDH8-207ENST00000582242 HAP1P54257 671 aaPredicted RBP18.12■□□□□ 0.49
CDH8-207ENST00000582242 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
CDH8-207ENST00000582242 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.48
CDH8-207ENST00000582242 TSPYL2Q9H2G4 693 aaPredicted RBP18.03■□□□□ 0.48
CDH8-207ENST00000582242 NUBP1P53384 320 aa18.02■□□□□ 0.48
CDH8-207ENST00000582242 GSE1Q14687 1217 aa18.02■□□□□ 0.48
CDH8-207ENST00000582242 CCDC61Q9Y6R9 512 aa17.99■□□□□ 0.47
CDH8-207ENST00000582242 MS4A3Q96HJ5 214 aa17.96■□□□□ 0.47
CDH8-207ENST00000582242 PAXIP1Q6ZW49 1069 aaPredicted RBP17.92■□□□□ 0.46
CDH8-207ENST00000582242 RASEFQ8IZ41 740 aa17.92■□□□□ 0.46
CDH8-207ENST00000582242 VSIG10Q8N0Z9 540 aa17.92■□□□□ 0.46
CDH8-207ENST00000582242 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
CDH8-207ENST00000582242 DCAF8Q5TAQ9 597 aa17.86■□□□□ 0.45
CDH8-207ENST00000582242 KIF12Q96FN5 646 aa17.86■□□□□ 0.45
CDH8-207ENST00000582242 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
CDH8-207ENST00000582242 RNF25Q96BH1 459 aaPredicted RBP17.85■□□□□ 0.45
CDH8-207ENST00000582242 ASTLQ6HA08 431 aaPredicted RBP17.84■□□□□ 0.45
CDH8-207ENST00000582242 FAM212AQ96EL1 285 aa17.84■□□□□ 0.45
CDH8-207ENST00000582242 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.44
CDH8-207ENST00000582242 HS6ST3Q8IZP7 471 aa17.83■□□□□ 0.44
CDH8-207ENST00000582242 SPRYD3Q8NCJ5 442 aa17.83■□□□□ 0.44
CDH8-207ENST00000582242 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
CDH8-207ENST00000582242 MAP3K13O43283 966 aa17.75■□□□□ 0.43
CDH8-207ENST00000582242 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
CDH8-207ENST00000582242 TAOK2Q9UL54 1235 aa17.75■□□□□ 0.43
CDH8-207ENST00000582242 RIOK3O14730 519 aaKnown RBP17.74■□□□□ 0.43
CDH8-207ENST00000582242 CHRM1P11229 460 aaPredicted RBP17.72■□□□□ 0.43
CDH8-207ENST00000582242 POTEB2H3BUK9 544 aa17.7■□□□□ 0.42
CDH8-207ENST00000582242 KDM2AQ9Y2K7 1162 aa17.7■□□□□ 0.42
CDH8-207ENST00000582242 SLC39A7Q92504 469 aa17.69■□□□□ 0.42
CDH8-207ENST00000582242 METRNQ9UJH8 293 aa17.68■□□□□ 0.42
CDH8-207ENST00000582242 TRPC6Q9Y210 931 aa17.68■□□□□ 0.42
CDH8-207ENST00000582242 ATN1P54259 1190 aaPredicted RBP17.67■□□□□ 0.42
CDH8-207ENST00000582242 C7P10643 843 aa17.66■□□□□ 0.42
CDH8-207ENST00000582242 BCANQ96GW7 911 aa17.66■□□□□ 0.42
CDH8-207ENST00000582242 BMP2KQ9NSY1 1161 aaPredicted RBP17.65■□□□□ 0.42
CDH8-207ENST00000582242 VGFO15240 615 aaPredicted RBP17.63■□□□□ 0.41
CDH8-207ENST00000582242 TIE1P35590 1138 aa17.63■□□□□ 0.41
CDH8-207ENST00000582242 TSHZ2Q9NRE2 1034 aa17.63■□□□□ 0.41
CDH8-207ENST00000582242 OTUD5Q96G74 571 aa17.62■□□□□ 0.41
CDH8-207ENST00000582242 SGIP1Q9BQI5 828 aa17.62■□□□□ 0.41
CDH8-207ENST00000582242 PCDHB13Q9Y5F0 798 aa17.58■□□□□ 0.4
CDH8-207ENST00000582242 STK25O00506 426 aa17.54■□□□□ 0.4
CDH8-207ENST00000582242 NKX1-1Q15270 411 aaPredicted RBP17.54■□□□□ 0.4
CDH8-207ENST00000582242 PYGBP11216 843 aa17.53■□□□□ 0.4
CDH8-207ENST00000582242 TTLL13PA6NNM8 815 aa17.52■□□□□ 0.4
CDH8-207ENST00000582242 IFNL1Q8IU54 200 aa17.49■□□□□ 0.39
CDH8-207ENST00000582242 POTEJP0CG39 1038 aa17.48■□□□□ 0.39
CDH8-207ENST00000582242 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.46■□□□□ 0.39
CDH8-207ENST00000582242 ZFP91Q96JP5 570 aaPredicted RBP17.46■□□□□ 0.39
CDH8-207ENST00000582242 POTEFA5A3E0 1075 aa17.45■□□□□ 0.38
CDH8-207ENST00000582242 GTPBP6O43824 516 aaPredicted RBP17.45■□□□□ 0.38
CDH8-207ENST00000582242 BCL11BQ9C0K0 894 aaPredicted RBP17.43■□□□□ 0.38
CDH8-207ENST00000582242 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
CDH8-207ENST00000582242 STK24Q9Y6E0 443 aa17.41■□□□□ 0.38
CDH8-207ENST00000582242 MAMSTRQ6ZN01 415 aa17.39■□□□□ 0.37
CDH8-207ENST00000582242 ZNF467Q7Z7K2 595 aaPredicted RBP17.37■□□□□ 0.37
CDH8-207ENST00000582242 IER5LQ5T953 404 aa17.36■□□□□ 0.37
CDH8-207ENST00000582242 TMEM106CQ9BVX2 250 aa17.35■□□□□ 0.37
CDH8-207ENST00000582242 RYDENQ9NUL5 291 aaKnown RBP17.35■□□□□ 0.37
CDH8-207ENST00000582242 COLQQ9Y215 455 aaPredicted RBP17.34■□□□□ 0.37
CDH8-207ENST00000582242 SEC24BO95487 1268 aa17.31■□□□□ 0.36
CDH8-207ENST00000582242 SCUBE2Q9NQ36 999 aa17.3■□□□□ 0.36
CDH8-207ENST00000582242 PCDHB8Q9UN66 801 aa17.26■□□□□ 0.35
CDH8-207ENST00000582242 PDAP1Q13442 181 aaKnown RBP17.25■□□□□ 0.35
CDH8-207ENST00000582242 IRX5P78411 483 aaPredicted RBP17.16■□□□□ 0.34
CDH8-207ENST00000582242 PRKCSHP14314 528 aaPredicted RBP17.15■□□□□ 0.34
CDH8-207ENST00000582242 PLCG2P16885 1265 aa17.14■□□□□ 0.33
CDH8-207ENST00000582242 PSEN1P49768 467 aa17.13■□□□□ 0.33
CDH8-207ENST00000582242 NBR1Q14596 966 aa17.11■□□□□ 0.33
CDH8-207ENST00000582242 POTEMA6NI47 508 aa17.09■□□□□ 0.33
CDH8-207ENST00000582242 POTEGQ6S5H5 508 aa17.06■□□□□ 0.32
CDH8-207ENST00000582242 OCEL1Q9H607 264 aa17.06■□□□□ 0.32
CDH8-207ENST00000582242 TPRNQ4KMQ1 711 aa17.05■□□□□ 0.32
CDH8-207ENST00000582242 LCE2DQ5TA82 110 aaPredicted RBP17.03■□□□□ 0.32
CDH8-207ENST00000582242 MFRPQ9BY79 579 aa17.01■□□□□ 0.31
CDH8-207ENST00000582242 FAM163AQ96GL9 167 aaPredicted RBP16.99■□□□□ 0.31
CDH8-207ENST00000582242 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
CDH8-207ENST00000582242 SLAIN1Q8ND83 568 aa16.95■□□□□ 0.3
CDH8-207ENST00000582242 MKRN3Q13064 507 aaKnown RBP16.93■□□□□ 0.3
CDH8-207ENST00000582242 PDCD7Q8N8D1 485 aaKnown RBP16.93■□□□□ 0.3
CDH8-207ENST00000582242 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
CDH8-207ENST00000582242 CABP2Q9NPB3 220 aa16.91■□□□□ 0.3
CDH8-207ENST00000582242 SOX12O15370 315 aa16.9■□□□□ 0.3
CDH8-207ENST00000582242 P3H3Q8IVL6 736 aa16.9■□□□□ 0.3
CDH8-207ENST00000582242 EFCAB3Q8N7B9 438 aa16.9■□□□□ 0.3
CDH8-207ENST00000582242 FBXO22Q8NEZ5 403 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms