RNA–Protein interactions for RNA: ENST00000582182.6

TRIM16-223, Transcript of tripartite motif containing 16, human

TSL 5

Gene TRIM16, Length 581 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-223	ENST00000582182	ATMIN	O43313	823 aa	Predicted RBP	12.46	□□□□□ -0.41
TRIM16-223	ENST00000582182	POTEG	Q6S5H5	508 aa		12.44	□□□□□ -0.42
TRIM16-223	ENST00000582182	SLC39A7	Q92504	469 aa		12.44	□□□□□ -0.42
TRIM16-223	ENST00000582182	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.43	□□□□□ -0.42
TRIM16-223	ENST00000582182	POTEJ	P0CG39	1038 aa		12.42	□□□□□ -0.42
TRIM16-223	ENST00000582182	C7	P10643	843 aa		12.41	□□□□□ -0.42
TRIM16-223	ENST00000582182	CCDC61	Q9Y6R9	512 aa		12.37	□□□□□ -0.43
TRIM16-223	ENST00000582182	ATN1	P54259	1190 aa	Predicted RBP	12.35	□□□□□ -0.43
TRIM16-223	ENST00000582182	MAMSTR	Q6ZN01	415 aa		12.33	□□□□□ -0.44
TRIM16-223	ENST00000582182	PROM2	Q8N271	834 aa		12.33	□□□□□ -0.44
TRIM16-223	ENST00000582182	KIF12	Q96FN5	646 aa		12.31	□□□□□ -0.44
TRIM16-223	ENST00000582182	TRPC6	Q9Y210	931 aa		12.28	□□□□□ -0.44
TRIM16-223	ENST00000582182	SCUBE2	Q9NQ36	999 aa		12.26	□□□□□ -0.45
TRIM16-223	ENST00000582182	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.26	□□□□□ -0.45
TRIM16-223	ENST00000582182	LCE2D	Q5TA82	110 aa	Predicted RBP	12.25	□□□□□ -0.45
TRIM16-223	ENST00000582182	POTEF	A5A3E0	1075 aa		12.24	□□□□□ -0.45
TRIM16-223	ENST00000582182	FAM163A	Q96GL9	167 aa	Predicted RBP	12.24	□□□□□ -0.45
TRIM16-223	ENST00000582182	MAP3K13	O43283	966 aa		12.23	□□□□□ -0.45
TRIM16-223	ENST00000582182	PCDH10	Q9P2E7	1040 aa		12.23	□□□□□ -0.45
TRIM16-223	ENST00000582182	RASEF	Q8IZ41	740 aa		12.21	□□□□□ -0.45
TRIM16-223	ENST00000582182	PLEKHG5	O94827	1062 aa		12.2	□□□□□ -0.46
TRIM16-223	ENST00000582182	MIER1	Q8N108	512 aa		12.2	□□□□□ -0.46
TRIM16-223	ENST00000582182	TIE1	P35590	1138 aa		12.19	□□□□□ -0.46
TRIM16-223	ENST00000582182	COLQ	Q9Y215	455 aa	Predicted RBP	12.14	□□□□□ -0.47
TRIM16-223	ENST00000582182	TTLL13P	A6NNM8	815 aa		12.13	□□□□□ -0.47
TRIM16-223	ENST00000582182	SEC24B	O95487	1268 aa		12.12	□□□□□ -0.47
TRIM16-223	ENST00000582182	PLCD3	Q8N3E9	789 aa		12.07	□□□□□ -0.48
TRIM16-223	ENST00000582182	TRIM35	Q9UPQ4	493 aa		12.07	□□□□□ -0.48
TRIM16-223	ENST00000582182	PCDHB13	Q9Y5F0	798 aa		12.07	□□□□□ -0.48
TRIM16-223	ENST00000582182	IER5L	Q5T953	404 aa		12.02	□□□□□ -0.49
TRIM16-223	ENST00000582182	SGIP1	Q9BQI5	828 aa		12.01	□□□□□ -0.49
TRIM16-223	ENST00000582182	NUBP1	P53384	320 aa		11.99	□□□□□ -0.49
TRIM16-223	ENST00000582182	IFNL1	Q8IU54	200 aa		11.98	□□□□□ -0.49
TRIM16-223	ENST00000582182	CDAN1	Q8IWY9	1227 aa		11.97	□□□□□ -0.49
TRIM16-223	ENST00000582182	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.96	□□□□□ -0.49
TRIM16-223	ENST00000582182	SLAIN1	Q8ND83	568 aa		11.95	□□□□□ -0.5
TRIM16-223	ENST00000582182	TMEM106C	Q9BVX2	250 aa		11.95	□□□□□ -0.5
TRIM16-223	ENST00000582182	FAM212A	Q96EL1	285 aa		11.92	□□□□□ -0.5
TRIM16-223	ENST00000582182	ST18	O60284	1047 aa		11.91	□□□□□ -0.5
TRIM16-223	ENST00000582182	PLCG2	P16885	1265 aa		11.9	□□□□□ -0.5
TRIM16-223	ENST00000582182	IRX5	P78411	483 aa	Predicted RBP	11.85	□□□□□ -0.51
TRIM16-223	ENST00000582182	PYGB	P11216	843 aa		11.8	□□□□□ -0.52
TRIM16-223	ENST00000582182	DCAF8	Q5TAQ9	597 aa		11.78	□□□□□ -0.52
TRIM16-223	ENST00000582182	OCEL1	Q9H607	264 aa		11.78	□□□□□ -0.52
TRIM16-223	ENST00000582182	FKBP8	Q14318	412 aa		11.76	□□□□□ -0.53
TRIM16-223	ENST00000582182	PCDHB8	Q9UN66	801 aa		11.76	□□□□□ -0.53
TRIM16-223	ENST00000582182	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.73	□□□□□ -0.53
TRIM16-223	ENST00000582182	SNPH	O15079	494 aa		11.7	□□□□□ -0.54
TRIM16-223	ENST00000582182	MARVELD3	Q96A59	401 aa		11.7	□□□□□ -0.54
TRIM16-223	ENST00000582182	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.7	□□□□□ -0.54
TRIM16-223	ENST00000582182	MMRN1	Q13201	1228 aa		11.68	□□□□□ -0.54
TRIM16-223	ENST00000582182	SPNS2	Q8IVW8	549 aa		11.68	□□□□□ -0.54
TRIM16-223	ENST00000582182	PDCD7	Q8N8D1	485 aa	Known RBP	11.63	□□□□□ -0.55
TRIM16-223	ENST00000582182	C3orf67	Q6ZVT6	689 aa		11.61	□□□□□ -0.55
TRIM16-223	ENST00000582182	GOLGA2	Q08379	1002 aa		11.59	□□□□□ -0.55
TRIM16-223	ENST00000582182	MKRN3	Q13064	507 aa	Known RBP	11.58	□□□□□ -0.56
TRIM16-223	ENST00000582182	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.58	□□□□□ -0.56
TRIM16-223	ENST00000582182	FBXO3	Q9UK99	471 aa		11.58	□□□□□ -0.56
TRIM16-223	ENST00000582182	EMP3	P54852	163 aa		11.57	□□□□□ -0.56
TRIM16-223	ENST00000582182	KLHL34	Q8N239	644 aa		11.56	□□□□□ -0.56
TRIM16-223	ENST00000582182	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.56	□□□□□ -0.56
TRIM16-223	ENST00000582182	GSE1	Q14687	1217 aa		11.55	□□□□□ -0.56
TRIM16-223	ENST00000582182	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
TRIM16-223	ENST00000582182	PSEN1	P49768	467 aa		11.51	□□□□□ -0.57
TRIM16-223	ENST00000582182	POTEB3	A0JP26	581 aa		11.49	□□□□□ -0.57
TRIM16-223	ENST00000582182	POTEB	Q6S5H4	581 aa		11.49	□□□□□ -0.57
TRIM16-223	ENST00000582182	HS3ST6	Q96QI5	342 aa		11.49	□□□□□ -0.57
TRIM16-223	ENST00000582182	FAM205C	A6NFA0	338 aa		11.48	□□□□□ -0.57
TRIM16-223	ENST00000582182	CHRM1	P11229	460 aa	Predicted RBP	11.48	□□□□□ -0.57
TRIM16-223	ENST00000582182	VASP	P50552	380 aa	Predicted RBP	11.48	□□□□□ -0.57
TRIM16-223	ENST00000582182	KRTAP3-3	Q9BYR6	98 aa		11.47	□□□□□ -0.57
TRIM16-223	ENST00000582182	KRTAP3-2	Q9BYR7	98 aa		11.47	□□□□□ -0.57
TRIM16-223	ENST00000582182	DPY19L2	Q6NUT2	758 aa		11.45	□□□□□ -0.58
TRIM16-223	ENST00000582182	PDAP1	Q13442	181 aa	Known RBP	11.41	□□□□□ -0.58
TRIM16-223	ENST00000582182	ILDR1	Q86SU0	546 aa	Predicted RBP	11.41	□□□□□ -0.58
TRIM16-223	ENST00000582182	CABP2	Q9NPB3	220 aa		11.39	□□□□□ -0.59
TRIM16-223	ENST00000582182		G3V3G9	751 aa		11.37	□□□□□ -0.59
TRIM16-223	ENST00000582182	BOLA1	Q9Y3E2	137 aa		11.37	□□□□□ -0.59
TRIM16-223	ENST00000582182	HOXB3	P14651	431 aa	Predicted RBP	11.36	□□□□□ -0.59
TRIM16-223	ENST00000582182	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.33	□□□□□ -0.6
TRIM16-223	ENST00000582182	ZNF710	Q8N1W2	664 aa		11.3	□□□□□ -0.6
TRIM16-223	ENST00000582182	HOXB1	P14653	301 aa	Predicted RBP	11.28	□□□□□ -0.6
TRIM16-223	ENST00000582182	SPOCK2	Q92563	424 aa		11.28	□□□□□ -0.6
TRIM16-223	ENST00000582182	ERBB3	P21860	1342 aa		11.27	□□□□□ -0.61
TRIM16-223	ENST00000582182	DOK7	Q18PE1	504 aa		11.26	□□□□□ -0.61
TRIM16-223	ENST00000582182	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.25	□□□□□ -0.61
TRIM16-223	ENST00000582182	VARS2	Q5ST30	1063 aa	Known RBP	11.2	□□□□□ -0.62
TRIM16-223	ENST00000582182	EFCAB3	Q8N7B9	438 aa		11.2	□□□□□ -0.62
TRIM16-223	ENST00000582182	RNF166	Q96A37	237 aa	Predicted RBP	11.19	□□□□□ -0.62
TRIM16-223	ENST00000582182	RIMBP2	O15034	1052 aa		11.18	□□□□□ -0.62
TRIM16-223	ENST00000582182	TMEM92	Q6UXU6	159 aa		11.15	□□□□□ -0.62
TRIM16-223	ENST00000582182	MICALL2	Q8IY33	904 aa		11.14	□□□□□ -0.63
TRIM16-223	ENST00000582182	MYT1L	Q9UL68	1186 aa		11.13	□□□□□ -0.63
TRIM16-223	ENST00000582182	ZNF687	Q8N1G0	1237 aa		11.09	□□□□□ -0.63
TRIM16-223	ENST00000582182	ZSWIM6	Q9HCJ5	1215 aa		11.09	□□□□□ -0.63
TRIM16-223	ENST00000582182	GPR153	Q6NV75	609 aa		11.08	□□□□□ -0.64
TRIM16-223	ENST00000582182	TRIM41	Q8WV44	630 aa		11.07	□□□□□ -0.64
TRIM16-223	ENST00000582182	MS4A4A	Q96JQ5	239 aa		11.05	□□□□□ -0.64
TRIM16-223	ENST00000582182	SOX12	O15370	315 aa		11.03	□□□□□ -0.64
TRIM16-223	ENST00000582182	PHF8	Q9UPP1	1060 aa		11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms