RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
NF1-220ENST00000581113 DCAF8L2P0C7V8 631 aa11.87□□□□□ -0.51
NF1-220ENST00000581113 PYGBP11216 843 aa11.86□□□□□ -0.51
NF1-220ENST00000581113 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
NF1-220ENST00000581113 RGL2O15211 777 aa11.83□□□□□ -0.52
NF1-220ENST00000581113 POTEHQ6S545 545 aa11.83□□□□□ -0.52
NF1-220ENST00000581113 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
NF1-220ENST00000581113 C19orf67A6NJJ6 358 aa11.82□□□□□ -0.52
NF1-220ENST00000581113 HAX1O00165 279 aa11.82□□□□□ -0.52
NF1-220ENST00000581113 CHRM1P11229 460 aaPredicted RBP11.79□□□□□ -0.52
NF1-220ENST00000581113 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
NF1-220ENST00000581113 PHF12Q96QT6 1004 aa11.74□□□□□ -0.53
NF1-220ENST00000581113 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
NF1-220ENST00000581113 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
NF1-220ENST00000581113 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
NF1-220ENST00000581113 MAP3K13O43283 966 aa11.7□□□□□ -0.54
NF1-220ENST00000581113 EVX2Q03828 476 aa11.7□□□□□ -0.54
NF1-220ENST00000581113 PCDHB13Q9Y5F0 798 aa11.7□□□□□ -0.54
NF1-220ENST00000581113 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
NF1-220ENST00000581113 TAOK2Q9UL54 1235 aa11.67□□□□□ -0.54
NF1-220ENST00000581113 PCDHB8Q9UN66 801 aa11.67□□□□□ -0.54
NF1-220ENST00000581113 VGFO15240 615 aaPredicted RBP11.64□□□□□ -0.55
NF1-220ENST00000581113 IFNL1Q8IU54 200 aa11.64□□□□□ -0.55
NF1-220ENST00000581113 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
NF1-220ENST00000581113 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
NF1-220ENST00000581113 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
NF1-220ENST00000581113 MS4A3Q96HJ5 214 aa11.59□□□□□ -0.55
NF1-220ENST00000581113 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
NF1-220ENST00000581113 STK25O00506 426 aa11.58□□□□□ -0.56
NF1-220ENST00000581113 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
NF1-220ENST00000581113 PSEN1P49768 467 aa11.56□□□□□ -0.56
NF1-220ENST00000581113 HS6ST3Q8IZP7 471 aa11.56□□□□□ -0.56
NF1-220ENST00000581113 GALR2O43603 387 aaPredicted RBP11.54□□□□□ -0.56
NF1-220ENST00000581113 BCL11BQ9C0K0 894 aaPredicted RBP11.54□□□□□ -0.56
NF1-220ENST00000581113 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
NF1-220ENST00000581113 CLCN6P51797 869 aa11.52□□□□□ -0.56
NF1-220ENST00000581113 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
NF1-220ENST00000581113 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
NF1-220ENST00000581113 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.48□□□□□ -0.57
NF1-220ENST00000581113 GABBR2O75899 941 aa11.47□□□□□ -0.57
NF1-220ENST00000581113 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
NF1-220ENST00000581113 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
NF1-220ENST00000581113 TIE1P35590 1138 aa11.43□□□□□ -0.58
NF1-220ENST00000581113 CABP2Q9NPB3 220 aa11.43□□□□□ -0.58
NF1-220ENST00000581113 TTLL13PA6NNM8 815 aa11.41□□□□□ -0.58
NF1-220ENST00000581113 DNAJC5Q9H3Z4 198 aa11.41□□□□□ -0.58
NF1-220ENST00000581113 BMP2KQ9NSY1 1161 aaPredicted RBP11.41□□□□□ -0.58
NF1-220ENST00000581113 PLCB2Q00722 1185 aa11.4□□□□□ -0.58
NF1-220ENST00000581113 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
NF1-220ENST00000581113 GOLGA2Q08379 1002 aa11.39□□□□□ -0.59
NF1-220ENST00000581113 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
NF1-220ENST00000581113 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
NF1-220ENST00000581113 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
NF1-220ENST00000581113 SPRYD3Q8NCJ5 442 aa11.37□□□□□ -0.59
NF1-220ENST00000581113 DCBLD2Q96PD2 775 aa11.36□□□□□ -0.59
NF1-220ENST00000581113 TRIM35Q9UPQ4 493 aa11.34□□□□□ -0.59
NF1-220ENST00000581113 ATN1P54259 1190 aaPredicted RBP11.33□□□□□ -0.6
NF1-220ENST00000581113 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
NF1-220ENST00000581113 ATMINO43313 823 aaPredicted RBP11.32□□□□□ -0.6
NF1-220ENST00000581113 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
NF1-220ENST00000581113 SOX12O15370 315 aa11.3□□□□□ -0.6
NF1-220ENST00000581113 GTPBP6O43824 516 aaPredicted RBP11.3□□□□□ -0.6
NF1-220ENST00000581113 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
NF1-220ENST00000581113 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
NF1-220ENST00000581113 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
NF1-220ENST00000581113 SLC24A1O60721 1099 aa11.26□□□□□ -0.61
NF1-220ENST00000581113 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
NF1-220ENST00000581113 NLRP6P59044 892 aa11.26□□□□□ -0.61
NF1-220ENST00000581113 PELP1Q8IZL8 1130 aaKnown RBP11.23□□□□□ -0.61
NF1-220ENST00000581113 FBXO22Q8NEZ5 403 aa11.23□□□□□ -0.61
NF1-220ENST00000581113 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.618e-7■■□□□ 14.1
NF1-220ENST00000581113 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
NF1-220ENST00000581113 IER5LQ5T953 404 aa11.19□□□□□ -0.62
NF1-220ENST00000581113 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
NF1-220ENST00000581113 SLC39A7Q92504 469 aa11.17□□□□□ -0.62
NF1-220ENST00000581113 PPP1R37O75864 691 aa11.16□□□□□ -0.62
NF1-220ENST00000581113 SEC24BO95487 1268 aa11.16□□□□□ -0.62
NF1-220ENST00000581113 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
NF1-220ENST00000581113 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
NF1-220ENST00000581113 ILDR1Q86SU0 546 aaPredicted RBP11.15□□□□□ -0.62
NF1-220ENST00000581113 OCEL1Q9H607 264 aa11.15□□□□□ -0.62
NF1-220ENST00000581113 PLCG2P16885 1265 aa11.14□□□□□ -0.63
NF1-220ENST00000581113 METRNQ9UJH8 293 aa11.14□□□□□ -0.63
NF1-220ENST00000581113 C7P10643 843 aa11.13□□□□□ -0.63
NF1-220ENST00000581113 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
NF1-220ENST00000581113 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
NF1-220ENST00000581113 COLQQ9Y215 455 aaPredicted RBP11.11□□□□□ -0.63
NF1-220ENST00000581113 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
NF1-220ENST00000581113 G3V3G9 751 aa11.04□□□□□ -0.64
NF1-220ENST00000581113 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
NF1-220ENST00000581113 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
NF1-220ENST00000581113 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
NF1-220ENST00000581113 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
NF1-220ENST00000581113 L3MBTL3Q96JM7 780 aaPredicted RBP11.01□□□□□ -0.65
NF1-220ENST00000581113 KDM2AQ9Y2K7 1162 aa11□□□□□ -0.65
NF1-220ENST00000581113 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
NF1-220ENST00000581113 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
NF1-220ENST00000581113 C3orf67Q6ZVT6 689 aa10.92□□□□□ -0.66
NF1-220ENST00000581113 PDE4AP27815 886 aa10.9□□□□□ -0.66
NF1-220ENST00000581113 WDR70Q9NW82 654 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms