RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 ASTLQ6HA08 431 aaPredicted RBP12.82□□□□□ -0.36
PTPRM-212ENST00000580838 ATMINO43313 823 aaPredicted RBP12.8□□□□□ -0.36
PTPRM-212ENST00000580838 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
PTPRM-212ENST00000580838 RASEFQ8IZ41 740 aa12.79□□□□□ -0.36
PTPRM-212ENST00000580838 OTUD5Q96G74 571 aa12.79□□□□□ -0.36
PTPRM-212ENST00000580838 FKBP8Q14318 412 aa12.76□□□□□ -0.37
PTPRM-212ENST00000580838 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
PTPRM-212ENST00000580838 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
PTPRM-212ENST00000580838 SLC39A7Q92504 469 aa12.72□□□□□ -0.37
PTPRM-212ENST00000580838 MAP3K13O43283 966 aa12.71□□□□□ -0.37
PTPRM-212ENST00000580838 C7P10643 843 aa12.7□□□□□ -0.38
PTPRM-212ENST00000580838 ATN1P54259 1190 aaPredicted RBP12.7□□□□□ -0.38
PTPRM-212ENST00000580838 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
PTPRM-212ENST00000580838 BMP2KQ9NSY1 1161 aaPredicted RBP12.67□□□□□ -0.38
PTPRM-212ENST00000580838 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
PTPRM-212ENST00000580838 NUBP1P53384 320 aa12.66□□□□□ -0.38
PTPRM-212ENST00000580838 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
PTPRM-212ENST00000580838 TIE1P35590 1138 aa12.61□□□□□ -0.39
PTPRM-212ENST00000580838 POTEFA5A3E0 1075 aa12.58□□□□□ -0.4
PTPRM-212ENST00000580838 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
PTPRM-212ENST00000580838 SGIP1Q9BQI5 828 aa12.55□□□□□ -0.4
PTPRM-212ENST00000580838 PCDHB13Q9Y5F0 798 aa12.55□□□□□ -0.4
PTPRM-212ENST00000580838 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
PTPRM-212ENST00000580838 MAMSTRQ6ZN01 415 aa12.52□□□□□ -0.41
PTPRM-212ENST00000580838 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
PTPRM-212ENST00000580838 COLQQ9Y215 455 aaPredicted RBP12.49□□□□□ -0.41
PTPRM-212ENST00000580838 FBXO3Q9UK99 471 aa12.48□□□□□ -0.41
PTPRM-212ENST00000580838 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
PTPRM-212ENST00000580838 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
PTPRM-212ENST00000580838 POTEMA6NI47 508 aa12.44□□□□□ -0.42
PTPRM-212ENST00000580838 SEC24BO95487 1268 aa12.43□□□□□ -0.42
PTPRM-212ENST00000580838 DCAF8Q5TAQ9 597 aa12.43□□□□□ -0.42
PTPRM-212ENST00000580838 IER5LQ5T953 404 aa12.42□□□□□ -0.42
PTPRM-212ENST00000580838 POTEGQ6S5H5 508 aa12.41□□□□□ -0.42
PTPRM-212ENST00000580838 TMEM106CQ9BVX2 250 aa12.41□□□□□ -0.42
PTPRM-212ENST00000580838 PLSCR2Q9NRY7 297 aa12.4□□□□□ -0.42
PTPRM-212ENST00000580838 PYGBP11216 843 aa12.39□□□□□ -0.43
PTPRM-212ENST00000580838 VASPP50552 380 aaPredicted RBP12.37□□□□□ -0.43
PTPRM-212ENST00000580838 LCE2DQ5TA82 110 aaPredicted RBP12.37□□□□□ -0.43
PTPRM-212ENST00000580838 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
PTPRM-212ENST00000580838 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
PTPRM-212ENST00000580838 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
PTPRM-212ENST00000580838 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
PTPRM-212ENST00000580838 PLCG2P16885 1265 aa12.27□□□□□ -0.45
PTPRM-212ENST00000580838 GSE1Q14687 1217 aa12.25□□□□□ -0.45
PTPRM-212ENST00000580838 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
PTPRM-212ENST00000580838 SLAIN1Q8ND83 568 aa12.21□□□□□ -0.45
PTPRM-212ENST00000580838 PCDH10Q9P2E7 1040 aa12.21□□□□□ -0.45
PTPRM-212ENST00000580838 CHRM1P11229 460 aaPredicted RBP12.19□□□□□ -0.46
PTPRM-212ENST00000580838 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
PTPRM-212ENST00000580838 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
PTPRM-212ENST00000580838 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
PTPRM-212ENST00000580838 PSEN1P49768 467 aa12.11□□□□□ -0.47
PTPRM-212ENST00000580838 PDCD7Q8N8D1 485 aaKnown RBP12.11□□□□□ -0.47
PTPRM-212ENST00000580838 ST18O60284 1047 aa12.09□□□□□ -0.47
PTPRM-212ENST00000580838 MKRN3Q13064 507 aaKnown RBP12.07□□□□□ -0.48
PTPRM-212ENST00000580838 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
PTPRM-212ENST00000580838 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
PTPRM-212ENST00000580838 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.06□□□□□ -0.48
PTPRM-212ENST00000580838 PDAP1Q13442 181 aaKnown RBP12.03□□□□□ -0.48
PTPRM-212ENST00000580838 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.492e-6■■□□□ 11.7
PTPRM-212ENST00000580838 CDAN1Q8IWY9 1227 aa12.01□□□□□ -0.49
PTPRM-212ENST00000580838 ILDR1Q86SU0 546 aaPredicted RBP11.99□□□□□ -0.49
PTPRM-212ENST00000580838 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
PTPRM-212ENST00000580838 SNPHO15079 494 aa11.96□□□□□ -0.49
PTPRM-212ENST00000580838 C3orf67Q6ZVT6 689 aa11.96□□□□□ -0.49
PTPRM-212ENST00000580838 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
PTPRM-212ENST00000580838 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
PTPRM-212ENST00000580838 TMEM121BQ9BXQ6 578 aaPredicted RBP11.93□□□□□ -0.5
PTPRM-212ENST00000580838 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
PTPRM-212ENST00000580838 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
PTPRM-212ENST00000580838 BOLA1Q9Y3E2 137 aa11.85□□□□□ -0.51
PTPRM-212ENST00000580838 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
PTPRM-212ENST00000580838 G3V3G9 751 aa11.79□□□□□ -0.52
PTPRM-212ENST00000580838 EMP3P54852 163 aa11.78□□□□□ -0.52
PTPRM-212ENST00000580838 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
PTPRM-212ENST00000580838 POTEB3A0JP26 581 aa11.75□□□□□ -0.53
PTPRM-212ENST00000580838 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
PTPRM-212ENST00000580838 POTEBQ6S5H4 581 aa11.75□□□□□ -0.53
PTPRM-212ENST00000580838 HOXB3P14651 431 aaPredicted RBP11.74□□□□□ -0.53
PTPRM-212ENST00000580838 SPNS2Q8IVW8 549 aa11.74□□□□□ -0.53
PTPRM-212ENST00000580838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.72□□□□□ -0.53
PTPRM-212ENST00000580838 ZFP91Q96JP5 570 aaPredicted RBP11.72□□□□□ -0.53
PTPRM-212ENST00000580838 HS3ST6Q96QI5 342 aa11.71□□□□□ -0.53
PTPRM-212ENST00000580838 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
PTPRM-212ENST00000580838 MMRN1Q13201 1228 aa11.7□□□□□ -0.54
PTPRM-212ENST00000580838 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
PTPRM-212ENST00000580838 MS4A4AQ96JQ5 239 aa11.68□□□□□ -0.54
PTPRM-212ENST00000580838 SOX12O15370 315 aa11.67□□□□□ -0.54
PTPRM-212ENST00000580838 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
PTPRM-212ENST00000580838 TMEM92Q6UXU6 159 aa11.66□□□□□ -0.54
PTPRM-212ENST00000580838 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
PTPRM-212ENST00000580838 KRTAP3-2Q9BYR7 98 aa11.66□□□□□ -0.54
PTPRM-212ENST00000580838 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
PTPRM-212ENST00000580838 HOXB1P14653 301 aaPredicted RBP11.63□□□□□ -0.55
PTPRM-212ENST00000580838 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
PTPRM-212ENST00000580838 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
PTPRM-212ENST00000580838 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
PTPRM-212ENST00000580838 NISCHQ9Y2I1 1504 aa11.55□□□□□ -0.56
PTPRM-212ENST00000580838 RIMBP2O15034 1052 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms