RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 CCDC61Q9Y6R9 512 aa16.45■□□□□ 0.22
VNN3-214ENST00000580813 MS4A3Q96HJ5 214 aa16.4■□□□□ 0.22
VNN3-214ENST00000580813 NUBP1P53384 320 aa16.38■□□□□ 0.21
VNN3-214ENST00000580813 VASPP50552 380 aaPredicted RBP16.36■□□□□ 0.21
VNN3-214ENST00000580813 LHX8Q68G74 356 aa16.34■□□□□ 0.21
VNN3-214ENST00000580813 KIF12Q96FN5 646 aa16.34■□□□□ 0.21
VNN3-214ENST00000580813 KLHL34Q8N239 644 aa16.31■□□□□ 0.2
VNN3-214ENST00000580813 FAM212AQ96EL1 285 aa16.3■□□□□ 0.2
VNN3-214ENST00000580813 MAP3K13O43283 966 aa16.28■□□□□ 0.2
VNN3-214ENST00000580813 DCAF8Q5TAQ9 597 aa16.23■□□□□ 0.19
VNN3-214ENST00000580813 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
VNN3-214ENST00000580813 ATMINO43313 823 aaPredicted RBP16.19■□□□□ 0.18
VNN3-214ENST00000580813 ASTLQ6HA08 431 aaPredicted RBP16.19■□□□□ 0.18
VNN3-214ENST00000580813 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
VNN3-214ENST00000580813 PCDHB13Q9Y5F0 798 aa16.17■□□□□ 0.18
VNN3-214ENST00000580813 SGIP1Q9BQI5 828 aa16.12■□□□□ 0.17
VNN3-214ENST00000580813 ATN1P54259 1190 aaPredicted RBP16.11■□□□□ 0.17
VNN3-214ENST00000580813 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
VNN3-214ENST00000580813 PYGBP11216 843 aa16.09■□□□□ 0.17
VNN3-214ENST00000580813 IFNLR1Q8IU57 520 aaPredicted RBP16.09■□□□□ 0.17
VNN3-214ENST00000580813 TIE1P35590 1138 aa16.08■□□□□ 0.16
VNN3-214ENST00000580813 SLC39A7Q92504 469 aa16.08■□□□□ 0.16
VNN3-214ENST00000580813 IFNL1Q8IU54 200 aa16.07■□□□□ 0.16
VNN3-214ENST00000580813 METRNQ9UJH8 293 aa16.07■□□□□ 0.16
VNN3-214ENST00000580813 C7P10643 843 aa16.05■□□□□ 0.16
VNN3-214ENST00000580813 GSE1Q14687 1217 aa16.05■□□□□ 0.16
VNN3-214ENST00000580813 TTLL13PA6NNM8 815 aa16.02■□□□□ 0.16
VNN3-214ENST00000580813 POTEB2H3BUK9 544 aa16.01■□□□□ 0.15
VNN3-214ENST00000580813 SPOCK2Q92563 424 aa16.01■□□□□ 0.15
VNN3-214ENST00000580813 TMEM106CQ9BVX2 250 aa15.94■□□□□ 0.14
VNN3-214ENST00000580813 CIZ1Q9ULV3 898 aaPredicted RBP15.94■□□□□ 0.14
VNN3-214ENST00000580813 PCDHB8Q9UN66 801 aa15.94■□□□□ 0.14
VNN3-214ENST00000580813 TRIM35Q9UPQ4 493 aa15.94■□□□□ 0.14
VNN3-214ENST00000580813 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
VNN3-214ENST00000580813 SEC24BO95487 1268 aa15.87■□□□□ 0.13
VNN3-214ENST00000580813 POTEFA5A3E0 1075 aa15.84■□□□□ 0.13
VNN3-214ENST00000580813 CHRM1P11229 460 aaPredicted RBP15.84■□□□□ 0.13
VNN3-214ENST00000580813 ZNF467Q7Z7K2 595 aaPredicted RBP15.83■□□□□ 0.12
VNN3-214ENST00000580813 POTEJP0CG39 1038 aa15.81■□□□□ 0.12
VNN3-214ENST00000580813 IER5LQ5T953 404 aa15.81■□□□□ 0.12
VNN3-214ENST00000580813 COLQQ9Y215 455 aaPredicted RBP15.81■□□□□ 0.12
VNN3-214ENST00000580813 MAMSTRQ6ZN01 415 aa15.77■□□□□ 0.12
VNN3-214ENST00000580813 SCUBE2Q9NQ36 999 aa15.72■□□□□ 0.11
VNN3-214ENST00000580813 PLCG2P16885 1265 aa15.71■□□□□ 0.11
VNN3-214ENST00000580813 PSEN1P49768 467 aa15.7■□□□□ 0.1
VNN3-214ENST00000580813 GOLGA2Q08379 1002 aa15.67■□□□□ 0.1
VNN3-214ENST00000580813 IRX5P78411 483 aaPredicted RBP15.65■□□□□ 0.1
VNN3-214ENST00000580813 PDAP1Q13442 181 aaKnown RBP15.65■□□□□ 0.1
VNN3-214ENST00000580813 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
VNN3-214ENST00000580813 OCEL1Q9H607 264 aa15.62■□□□□ 0.09
VNN3-214ENST00000580813 MKRN3Q13064 507 aaKnown RBP15.61■□□□□ 0.09
VNN3-214ENST00000580813 CABP2Q9NPB3 220 aa15.53■□□□□ 0.08
VNN3-214ENST00000580813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.07
VNN3-214ENST00000580813 PDCD7Q8N8D1 485 aaKnown RBP15.47■□□□□ 0.07
VNN3-214ENST00000580813 RIOK3O14730 519 aaKnown RBP15.46■□□□□ 0.07
VNN3-214ENST00000580813 SLAIN1Q8ND83 568 aa15.46■□□□□ 0.07
VNN3-214ENST00000580813 RNF25Q96BH1 459 aaPredicted RBP15.44■□□□□ 0.06
VNN3-214ENST00000580813 FAM163AQ96GL9 167 aaPredicted RBP15.44■□□□□ 0.06
VNN3-214ENST00000580813 L3MBTL3Q96JM7 780 aaPredicted RBP15.39■□□□□ 0.05
VNN3-214ENST00000580813 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.39■□□□□ 0.05
VNN3-214ENST00000580813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.37■□□□□ 0.05
VNN3-214ENST00000580813 VGFO15240 615 aaPredicted RBP15.37■□□□□ 0.05
VNN3-214ENST00000580813 ZFP91Q96JP5 570 aaPredicted RBP15.37■□□□□ 0.05
VNN3-214ENST00000580813 POTEMA6NI47 508 aa15.36■□□□□ 0.05
VNN3-214ENST00000580813 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
VNN3-214ENST00000580813 EFCAB3Q8N7B9 438 aa15.36■□□□□ 0.05
VNN3-214ENST00000580813 DPY19L2Q6NUT2 758 aa15.34■□□□□ 0.05
VNN3-214ENST00000580813 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
VNN3-214ENST00000580813 C3orf67Q6ZVT6 689 aa15.34■□□□□ 0.05
VNN3-214ENST00000580813 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
VNN3-214ENST00000580813 LCE2DQ5TA82 110 aaPredicted RBP15.3■□□□□ 0.04
VNN3-214ENST00000580813 G3V3G9 751 aa15.29■□□□□ 0.04
VNN3-214ENST00000580813 PKD2Q13563 968 aa15.28■□□□□ 0.04
VNN3-214ENST00000580813 TAOK2Q9UL54 1235 aa15.28■□□□□ 0.04
VNN3-214ENST00000580813 BOLA1Q9Y3E2 137 aa15.25■□□□□ 0.03
VNN3-214ENST00000580813 BCL11BQ9C0K0 894 aaPredicted RBP15.22■□□□□ 0.03
VNN3-214ENST00000580813 SOX12O15370 315 aa15.21■□□□□ 0.03
VNN3-214ENST00000580813 RGL2O15211 777 aa15.2■□□□□ 0.02
VNN3-214ENST00000580813 STK24Q9Y6E0 443 aa15.2■□□□□ 0.02
VNN3-214ENST00000580813 SNPHO15079 494 aa15.18■□□□□ 0.02
VNN3-214ENST00000580813 STK25O00506 426 aa15.17■□□□□ 0.02
VNN3-214ENST00000580813 ST18O60284 1047 aa15.17■□□□□ 0.02
VNN3-214ENST00000580813 PHF8Q9UPP1 1060 aa15.17■□□□□ 0.02
VNN3-214ENST00000580813 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
VNN3-214ENST00000580813 PLSCR2Q9NRY7 297 aa15.1■□□□□ 0.01
VNN3-214ENST00000580813 TMEM121BQ9BXQ6 578 aaPredicted RBP15.09■□□□□ 0.01
VNN3-214ENST00000580813 NLRP6P59044 892 aa15.08■□□□□ 0
VNN3-214ENST00000580813 MICALL2Q8IY33 904 aa15.06■□□□□ 0
VNN3-214ENST00000580813 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
VNN3-214ENST00000580813 FBXO22Q8NEZ5 403 aa15.01□□□□□ -0.01
VNN3-214ENST00000580813 MFRPQ9BY79 579 aa15.01□□□□□ -0.01
VNN3-214ENST00000580813 MARVELD3Q96A59 401 aa14.99□□□□□ -0.01
VNN3-214ENST00000580813 CDAN1Q8IWY9 1227 aa14.96□□□□□ -0.01
VNN3-214ENST00000580813 TMEM92Q6UXU6 159 aa14.94□□□□□ -0.02
VNN3-214ENST00000580813 ZNF710Q8N1W2 664 aa14.91□□□□□ -0.02
VNN3-214ENST00000580813 HOXB3P14651 431 aaPredicted RBP14.9□□□□□ -0.02
VNN3-214ENST00000580813 EMP3P54852 163 aa14.9□□□□□ -0.02
VNN3-214ENST00000580813 DOK7Q18PE1 504 aa14.88□□□□□ -0.03
VNN3-214ENST00000580813 CHGAP10645 457 aaKnown RBP14.86□□□□□ -0.03
VNN3-214ENST00000580813 HS6ST3Q8IZP7 471 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms