RNA–Protein interactions for RNA: ENST00000580199.5

LINC00511-208, long intergenic non-protein coding RNA 511, humanhuman

TSL 3

Gene LINC00511, Length 536 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-208ENST00000580199 FBXO3Q9UK99 471 aa8.83□□□□□ -1
LINC00511-208ENST00000580199 CCDC61Q9Y6R9 512 aa8.82□□□□□ -1
LINC00511-208ENST00000580199 PLSCR2Q9NRY7 297 aa8.81□□□□□ -1
LINC00511-208ENST00000580199 RASEFQ8IZ41 740 aa8.8□□□□□ -1
LINC00511-208ENST00000580199 KIF12Q96FN5 646 aa8.77□□□□□ -1.01
LINC00511-208ENST00000580199 FAM212AQ96EL1 285 aa8.76□□□□□ -1.01
LINC00511-208ENST00000580199 ASTLQ6HA08 431 aaPredicted RBP8.75□□□□□ -1.01
LINC00511-208ENST00000580199 MAP3K13O43283 966 aa8.73□□□□□ -1.01
LINC00511-208ENST00000580199 ATMINO43313 823 aaPredicted RBP8.73□□□□□ -1.01
LINC00511-208ENST00000580199 SLC39A7Q92504 469 aa8.73□□□□□ -1.01
LINC00511-208ENST00000580199 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
LINC00511-208ENST00000580199 NUBP1P53384 320 aa8.71□□□□□ -1.02
LINC00511-208ENST00000580199 PELP1Q8IZL8 1130 aaKnown RBP8.71□□□□□ -1.02
LINC00511-208ENST00000580199 C7P10643 843 aa8.7□□□□□ -1.02
LINC00511-208ENST00000580199 PCDHB13Q9Y5F0 798 aa8.7□□□□□ -1.02
LINC00511-208ENST00000580199 KLHL34Q8N239 644 aa8.69□□□□□ -1.02
LINC00511-208ENST00000580199 TIE1P35590 1138 aa8.68□□□□□ -1.02
LINC00511-208ENST00000580199 VASPP50552 380 aaPredicted RBP8.67□□□□□ -1.02
LINC00511-208ENST00000580199 ATN1P54259 1190 aaPredicted RBP8.67□□□□□ -1.02
LINC00511-208ENST00000580199 SGIP1Q9BQI5 828 aa8.67□□□□□ -1.02
LINC00511-208ENST00000580199 BMP2KQ9NSY1 1161 aaPredicted RBP8.67□□□□□ -1.02
LINC00511-208ENST00000580199 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
LINC00511-208ENST00000580199 TRPC6Q9Y210 931 aa8.65□□□□□ -1.02
LINC00511-208ENST00000580199 POTEB2H3BUK9 544 aa8.63□□□□□ -1.03
LINC00511-208ENST00000580199 TTLL13PA6NNM8 815 aa8.62□□□□□ -1.03
LINC00511-208ENST00000580199 OTUD5Q96G74 571 aa8.62□□□□□ -1.03
LINC00511-208ENST00000580199 SEC24BO95487 1268 aa8.61□□□□□ -1.03
LINC00511-208ENST00000580199 MAMSTRQ6ZN01 415 aa8.61□□□□□ -1.03
LINC00511-208ENST00000580199 IFNL1Q8IU54 200 aa8.6□□□□□ -1.03
LINC00511-208ENST00000580199 PYGBP11216 843 aa8.59□□□□□ -1.03
LINC00511-208ENST00000580199 SCUBE2Q9NQ36 999 aa8.59□□□□□ -1.03
LINC00511-208ENST00000580199 TRIM35Q9UPQ4 493 aa8.59□□□□□ -1.03
LINC00511-208ENST00000580199 POTEMA6NI47 508 aa8.58□□□□□ -1.04
LINC00511-208ENST00000580199 GSE1Q14687 1217 aa8.58□□□□□ -1.04
LINC00511-208ENST00000580199 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
LINC00511-208ENST00000580199 IER5LQ5T953 404 aa8.55□□□□□ -1.04
LINC00511-208ENST00000580199 POTEGQ6S5H5 508 aa8.53□□□□□ -1.04
LINC00511-208ENST00000580199 PCDH10Q9P2E7 1040 aa8.52□□□□□ -1.05
LINC00511-208ENST00000580199 POTEJP0CG39 1038 aa8.5□□□□□ -1.05
LINC00511-208ENST00000580199 PLCG2P16885 1265 aa8.5□□□□□ -1.05
LINC00511-208ENST00000580199 ZNF467Q7Z7K2 595 aaPredicted RBP8.5□□□□□ -1.05
LINC00511-208ENST00000580199 SPOCK2Q92563 424 aa8.5□□□□□ -1.05
LINC00511-208ENST00000580199 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
LINC00511-208ENST00000580199 COLQQ9Y215 455 aaPredicted RBP8.5□□□□□ -1.05
LINC00511-208ENST00000580199 POTEFA5A3E0 1075 aa8.49□□□□□ -1.05
LINC00511-208ENST00000580199 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
LINC00511-208ENST00000580199 CIZ1Q9ULV3 898 aaPredicted RBP8.48□□□□□ -1.05
LINC00511-208ENST00000580199 IFNLR1Q8IU57 520 aaPredicted RBP8.46□□□□□ -1.06
LINC00511-208ENST00000580199 CHRM1P11229 460 aaPredicted RBP8.43□□□□□ -1.06
LINC00511-208ENST00000580199 IRX5P78411 483 aaPredicted RBP8.41□□□□□ -1.06
LINC00511-208ENST00000580199 MKRN3Q13064 507 aaKnown RBP8.41□□□□□ -1.06
LINC00511-208ENST00000580199 OCEL1Q9H607 264 aa8.41□□□□□ -1.06
LINC00511-208ENST00000580199 FAM163AQ96GL9 167 aaPredicted RBP8.4□□□□□ -1.06
LINC00511-208ENST00000580199 PSEN1P49768 467 aa8.39□□□□□ -1.07
LINC00511-208ENST00000580199 PDAP1Q13442 181 aaKnown RBP8.38□□□□□ -1.07
LINC00511-208ENST00000580199 SLAIN1Q8ND83 568 aa8.38□□□□□ -1.07
LINC00511-208ENST00000580199 TRIM41Q8WV44 630 aa8.36□□□□□ -1.07
LINC00511-208ENST00000580199 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.34□□□□□ -1.07
LINC00511-208ENST00000580199 C3orf67Q6ZVT6 689 aa8.33□□□□□ -1.08
LINC00511-208ENST00000580199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00511-208ENST00000580199 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
LINC00511-208ENST00000580199 L3MBTL3Q96JM7 780 aaPredicted RBP8.31□□□□□ -1.08
LINC00511-208ENST00000580199 CABP2Q9NPB3 220 aa8.31□□□□□ -1.08
LINC00511-208ENST00000580199 G3V3G9 751 aa8.3□□□□□ -1.08
LINC00511-208ENST00000580199 PDCD7Q8N8D1 485 aaKnown RBP8.29□□□□□ -1.08
LINC00511-208ENST00000580199 SNPHO15079 494 aa8.27□□□□□ -1.09
LINC00511-208ENST00000580199 RIOK3O14730 519 aaKnown RBP8.23□□□□□ -1.09
LINC00511-208ENST00000580199 ST18O60284 1047 aa8.22□□□□□ -1.09
LINC00511-208ENST00000580199 VGFO15240 615 aaPredicted RBP8.19□□□□□ -1.1
LINC00511-208ENST00000580199 TMEM121BQ9BXQ6 578 aaPredicted RBP8.19□□□□□ -1.1
LINC00511-208ENST00000580199 TAOK2Q9UL54 1235 aa8.19□□□□□ -1.1
LINC00511-208ENST00000580199 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
LINC00511-208ENST00000580199 ILDR1Q86SU0 546 aaPredicted RBP8.18□□□□□ -1.1
LINC00511-208ENST00000580199 CDAN1Q8IWY9 1227 aa8.18□□□□□ -1.1
LINC00511-208ENST00000580199 EFCAB3Q8N7B9 438 aa8.18□□□□□ -1.1
LINC00511-208ENST00000580199 DPY19L2Q6NUT2 758 aa8.17□□□□□ -1.1
LINC00511-208ENST00000580199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.16□□□□□ -1.1
LINC00511-208ENST00000580199 ZFP91Q96JP5 570 aaPredicted RBP8.16□□□□□ -1.1
LINC00511-208ENST00000580199 RNF25Q96BH1 459 aaPredicted RBP8.15□□□□□ -1.1
LINC00511-208ENST00000580199 SOX12O15370 315 aa8.12□□□□□ -1.11
LINC00511-208ENST00000580199 ECM2O94769 699 aaPredicted RBP8.12□□□□□ -1.11
LINC00511-208ENST00000580199 MARVELD3Q96A59 401 aa8.12□□□□□ -1.11
LINC00511-208ENST00000580199 EMP3P54852 163 aa8.11□□□□□ -1.11
LINC00511-208ENST00000580199 BCL11BQ9C0K0 894 aaPredicted RBP8.09□□□□□ -1.11
LINC00511-208ENST00000580199 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
LINC00511-208ENST00000580199 ZNF710Q8N1W2 664 aa8.08□□□□□ -1.12
LINC00511-208ENST00000580199 PHF8Q9UPP1 1060 aa8.08□□□□□ -1.12
LINC00511-208ENST00000580199 STK25O00506 426 aa8.07□□□□□ -1.12
LINC00511-208ENST00000580199 DOK7Q18PE1 504 aa8.07□□□□□ -1.12
LINC00511-208ENST00000580199 MICALL2Q8IY33 904 aa8.07□□□□□ -1.12
LINC00511-208ENST00000580199 RIMBP2O15034 1052 aa8.06□□□□□ -1.12
LINC00511-208ENST00000580199 NLRP6P59044 892 aa8.06□□□□□ -1.12
LINC00511-208ENST00000580199 FAM205CA6NFA0 338 aa8.03□□□□□ -1.12
LINC00511-208ENST00000580199 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
LINC00511-208ENST00000580199 HS3ST6Q96QI5 342 aa8.01□□□□□ -1.13
LINC00511-208ENST00000580199 HOXB3P14651 431 aaPredicted RBP8□□□□□ -1.13
LINC00511-208ENST00000580199 MMRN1Q13201 1228 aa8□□□□□ -1.13
LINC00511-208ENST00000580199 RGL2O15211 777 aa7.99□□□□□ -1.13
LINC00511-208ENST00000580199 PKD2Q13563 968 aa7.99□□□□□ -1.13
LINC00511-208ENST00000580199 SPNS2Q8IVW8 549 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms