RNA–Protein interactions for RNA: ENST00000580157.2

CDH19-205, Transcript of cadherin 19, humanhuman

TSL 4

Gene CDH19, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-205ENST00000580157 METRNQ9UJH8 293 aa11.11□□□□□ -0.63
CDH19-205ENST00000580157 POTEMA6NI47 508 aa11.1□□□□□ -0.63
CDH19-205ENST00000580157 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
CDH19-205ENST00000580157 C7P10643 843 aa11.06□□□□□ -0.64
CDH19-205ENST00000580157 TSPYL2Q9H2G4 693 aaPredicted RBP11.06□□□□□ -0.64
CDH19-205ENST00000580157 PROM2Q8N271 834 aa11.05□□□□□ -0.64
CDH19-205ENST00000580157 SLC39A7Q92504 469 aa11.05□□□□□ -0.64
CDH19-205ENST00000580157 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
CDH19-205ENST00000580157 ATN1P54259 1190 aaPredicted RBP11.01□□□□□ -0.65
CDH19-205ENST00000580157 KIF12Q96FN5 646 aa10.99□□□□□ -0.65
CDH19-205ENST00000580157 TRPC6Q9Y210 931 aa10.97□□□□□ -0.65
CDH19-205ENST00000580157 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
CDH19-205ENST00000580157 MAMSTRQ6ZN01 415 aa10.95□□□□□ -0.66
CDH19-205ENST00000580157 POTEFA5A3E0 1075 aa10.94□□□□□ -0.66
CDH19-205ENST00000580157 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
CDH19-205ENST00000580157 MAP3K13O43283 966 aa10.91□□□□□ -0.66
CDH19-205ENST00000580157 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
CDH19-205ENST00000580157 FAM163AQ96GL9 167 aaPredicted RBP10.89□□□□□ -0.67
CDH19-205ENST00000580157 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
CDH19-205ENST00000580157 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
CDH19-205ENST00000580157 MIER1Q8N108 512 aa10.86□□□□□ -0.67
CDH19-205ENST00000580157 TIE1P35590 1138 aa10.85□□□□□ -0.67
CDH19-205ENST00000580157 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
CDH19-205ENST00000580157 TTLL13PA6NNM8 815 aa10.82□□□□□ -0.68
CDH19-205ENST00000580157 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
CDH19-205ENST00000580157 SEC24BO95487 1268 aa10.76□□□□□ -0.69
CDH19-205ENST00000580157 TRIM35Q9UPQ4 493 aa10.74□□□□□ -0.69
CDH19-205ENST00000580157 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
CDH19-205ENST00000580157 PLCD3Q8N3E9 789 aa10.72□□□□□ -0.69
CDH19-205ENST00000580157 NUBP1P53384 320 aa10.71□□□□□ -0.69
CDH19-205ENST00000580157 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
CDH19-205ENST00000580157 IER5LQ5T953 404 aa10.7□□□□□ -0.7
CDH19-205ENST00000580157 IFNL1Q8IU54 200 aa10.69□□□□□ -0.7
CDH19-205ENST00000580157 CDAN1Q8IWY9 1227 aa10.64□□□□□ -0.71
CDH19-205ENST00000580157 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
CDH19-205ENST00000580157 SLAIN1Q8ND83 568 aa10.63□□□□□ -0.71
CDH19-205ENST00000580157 ST18O60284 1047 aa10.61□□□□□ -0.71
CDH19-205ENST00000580157 ZBTB47Q9UFB7 747 aaPredicted RBP10.61□□□□□ -0.71
CDH19-205ENST00000580157 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
CDH19-205ENST00000580157 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
CDH19-205ENST00000580157 PLCG2P16885 1265 aa10.57□□□□□ -0.72
CDH19-205ENST00000580157 PYGBP11216 843 aa10.5□□□□□ -0.73
CDH19-205ENST00000580157 OCEL1Q9H607 264 aa10.5□□□□□ -0.73
CDH19-205ENST00000580157 DCAF8Q5TAQ9 597 aa10.48□□□□□ -0.73
CDH19-205ENST00000580157 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
CDH19-205ENST00000580157 FKBP8Q14318 412 aa10.47□□□□□ -0.73
CDH19-205ENST00000580157 MARVELD3Q96A59 401 aa10.42□□□□□ -0.74
CDH19-205ENST00000580157 TMEM121BQ9BXQ6 578 aaPredicted RBP10.42□□□□□ -0.74
CDH19-205ENST00000580157 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
CDH19-205ENST00000580157 MMRN1Q13201 1228 aa10.4□□□□□ -0.74
CDH19-205ENST00000580157 SPNS2Q8IVW8 549 aa10.4□□□□□ -0.74
CDH19-205ENST00000580157 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
CDH19-205ENST00000580157 SNPHO15079 494 aa10.38□□□□□ -0.75
CDH19-205ENST00000580157 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
CDH19-205ENST00000580157 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
CDH19-205ENST00000580157 POTEB3A0JP26 581 aa10.29□□□□□ -0.76
CDH19-205ENST00000580157 MKRN3Q13064 507 aaKnown RBP10.29□□□□□ -0.76
CDH19-205ENST00000580157 POTEBQ6S5H4 581 aa10.29□□□□□ -0.76
CDH19-205ENST00000580157 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
CDH19-205ENST00000580157 EMP3P54852 163 aa10.27□□□□□ -0.77
CDH19-205ENST00000580157 GSE1Q14687 1217 aa10.27□□□□□ -0.77
CDH19-205ENST00000580157 L3MBTL3Q96JM7 780 aaPredicted RBP10.27□□□□□ -0.77
CDH19-205ENST00000580157 GOLGA2Q08379 1002 aa10.26□□□□□ -0.77
CDH19-205ENST00000580157 KLHL34Q8N239 644 aa10.26□□□□□ -0.77
CDH19-205ENST00000580157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH19-205ENST00000580157 CHRM1P11229 460 aaPredicted RBP10.25□□□□□ -0.77
CDH19-205ENST00000580157 PSEN1P49768 467 aa10.25□□□□□ -0.77
CDH19-205ENST00000580157 VASPP50552 380 aaPredicted RBP10.24□□□□□ -0.77
CDH19-205ENST00000580157 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
CDH19-205ENST00000580157 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
CDH19-205ENST00000580157 ILDR1Q86SU0 546 aaPredicted RBP10.23□□□□□ -0.77
CDH19-205ENST00000580157 HS3ST6Q96QI5 342 aa10.23□□□□□ -0.77
CDH19-205ENST00000580157 DPY19L2Q6NUT2 758 aa10.22□□□□□ -0.77
CDH19-205ENST00000580157 FAM205CA6NFA0 338 aa10.21□□□□□ -0.77
CDH19-205ENST00000580157 PDAP1Q13442 181 aaKnown RBP10.16□□□□□ -0.78
CDH19-205ENST00000580157 HOXB3P14651 431 aaPredicted RBP10.15□□□□□ -0.78
CDH19-205ENST00000580157 CABP2Q9NPB3 220 aa10.13□□□□□ -0.79
CDH19-205ENST00000580157 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
CDH19-205ENST00000580157 HOXB1P14653 301 aaPredicted RBP10.06□□□□□ -0.8
CDH19-205ENST00000580157 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
CDH19-205ENST00000580157 CIZ1Q9ULV3 898 aaPredicted RBP10.06□□□□□ -0.8
CDH19-205ENST00000580157 G3V3G9 751 aa10.05□□□□□ -0.8
CDH19-205ENST00000580157 SPOCK2Q92563 424 aa10.04□□□□□ -0.8
CDH19-205ENST00000580157 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
CDH19-205ENST00000580157 ERBB3P21860 1342 aa10.01□□□□□ -0.81
CDH19-205ENST00000580157 DOK7Q18PE1 504 aa10□□□□□ -0.81
CDH19-205ENST00000580157 EFCAB3Q8N7B9 438 aa9.99□□□□□ -0.81
CDH19-205ENST00000580157 TMEM92Q6UXU6 159 aa9.97□□□□□ -0.81
CDH19-205ENST00000580157 VARS2Q5ST30 1063 aaKnown RBP9.96□□□□□ -0.82
CDH19-205ENST00000580157 RNF166Q96A37 237 aaPredicted RBP9.93□□□□□ -0.82
CDH19-205ENST00000580157 MICALL2Q8IY33 904 aa9.92□□□□□ -0.82
CDH19-205ENST00000580157 RIMBP2O15034 1052 aa9.91□□□□□ -0.82
CDH19-205ENST00000580157 GPR153Q6NV75 609 aa9.89□□□□□ -0.83
CDH19-205ENST00000580157 ZNF687Q8N1G0 1237 aa9.88□□□□□ -0.83
CDH19-205ENST00000580157 MS4A4AQ96JQ5 239 aa9.88□□□□□ -0.83
CDH19-205ENST00000580157 ZSWIM6Q9HCJ5 1215 aa9.88□□□□□ -0.83
CDH19-205ENST00000580157 MYT1LQ9UL68 1186 aa9.88□□□□□ -0.83
CDH19-205ENST00000580157 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
CDH19-205ENST00000580157 SOX12O15370 315 aa9.83□□□□□ -0.84
CDH19-205ENST00000580157 RNF25Q96BH1 459 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms