RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 FBXO3Q9UK99 471 aa10.44□□□□□ -0.74
CDH8-206ENST00000580044 MS4A3Q96HJ5 214 aa10.37□□□□□ -0.75
CDH8-206ENST00000580044 CCDC61Q9Y6R9 512 aa10.36□□□□□ -0.75
CDH8-206ENST00000580044 SLC39A7Q92504 469 aa10.34□□□□□ -0.75
CDH8-206ENST00000580044 FAM212AQ96EL1 285 aa10.34□□□□□ -0.75
CDH8-206ENST00000580044 C7P10643 843 aa10.32□□□□□ -0.76
CDH8-206ENST00000580044 RASEFQ8IZ41 740 aa10.31□□□□□ -0.76
CDH8-206ENST00000580044 KIF12Q96FN5 646 aa10.31□□□□□ -0.76
CDH8-206ENST00000580044 ASTLQ6HA08 431 aaPredicted RBP10.3□□□□□ -0.76
CDH8-206ENST00000580044 ATMINO43313 823 aaPredicted RBP10.28□□□□□ -0.76
CDH8-206ENST00000580044 KLHL34Q8N239 644 aa10.27□□□□□ -0.77
CDH8-206ENST00000580044 SGIP1Q9BQI5 828 aa10.27□□□□□ -0.77
CDH8-206ENST00000580044 METRNQ9UJH8 293 aa10.27□□□□□ -0.77
CDH8-206ENST00000580044 MAP3K13O43283 966 aa10.26□□□□□ -0.77
CDH8-206ENST00000580044 MAMSTRQ6ZN01 415 aa10.26□□□□□ -0.77
CDH8-206ENST00000580044 DCAF8Q5TAQ9 597 aa10.25□□□□□ -0.77
CDH8-206ENST00000580044 PCDHB13Q9Y5F0 798 aa10.25□□□□□ -0.77
CDH8-206ENST00000580044 TIE1P35590 1138 aa10.24□□□□□ -0.77
CDH8-206ENST00000580044 SEC24BO95487 1268 aa10.21□□□□□ -0.77
CDH8-206ENST00000580044 NUBP1P53384 320 aa10.21□□□□□ -0.77
CDH8-206ENST00000580044 PELP1Q8IZL8 1130 aaKnown RBP10.21□□□□□ -0.77
CDH8-206ENST00000580044 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
CDH8-206ENST00000580044 SCUBE2Q9NQ36 999 aa10.19□□□□□ -0.78
CDH8-206ENST00000580044 BMP2KQ9NSY1 1161 aaPredicted RBP10.17□□□□□ -0.78
CDH8-206ENST00000580044 GSE1Q14687 1217 aa10.16□□□□□ -0.78
CDH8-206ENST00000580044 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
CDH8-206ENST00000580044 OTUD5Q96G74 571 aa10.14□□□□□ -0.79
CDH8-206ENST00000580044 TTLL13PA6NNM8 815 aa10.12□□□□□ -0.79
CDH8-206ENST00000580044 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
CDH8-206ENST00000580044 IER5LQ5T953 404 aa10.11□□□□□ -0.79
CDH8-206ENST00000580044 TMEM106CQ9BVX2 250 aa10.1□□□□□ -0.79
CDH8-206ENST00000580044 TRIM35Q9UPQ4 493 aa10.1□□□□□ -0.79
CDH8-206ENST00000580044 PYGBP11216 843 aa10.09□□□□□ -0.79
CDH8-206ENST00000580044 IFNL1Q8IU54 200 aa10.09□□□□□ -0.79
CDH8-206ENST00000580044 TRPC6Q9Y210 931 aa10.09□□□□□ -0.79
CDH8-206ENST00000580044 PLCG2P16885 1265 aa10.06□□□□□ -0.8
CDH8-206ENST00000580044 GOLGA2Q08379 1002 aa10.06□□□□□ -0.8
CDH8-206ENST00000580044 ZNF467Q7Z7K2 595 aaPredicted RBP10.05□□□□□ -0.8
CDH8-206ENST00000580044 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
CDH8-206ENST00000580044 CIZ1Q9ULV3 898 aaPredicted RBP10□□□□□ -0.81
CDH8-206ENST00000580044 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
CDH8-206ENST00000580044 FAM163AQ96GL9 167 aaPredicted RBP9.97□□□□□ -0.81
CDH8-206ENST00000580044 COLQQ9Y215 455 aaPredicted RBP9.97□□□□□ -0.81
CDH8-206ENST00000580044 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
CDH8-206ENST00000580044 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.82
CDH8-206ENST00000580044 OCEL1Q9H607 264 aa9.96□□□□□ -0.82
CDH8-206ENST00000580044 POTEMA6NI47 508 aa9.95□□□□□ -0.82
CDH8-206ENST00000580044 POTEFA5A3E0 1075 aa9.94□□□□□ -0.82
CDH8-206ENST00000580044 POTEJP0CG39 1038 aa9.94□□□□□ -0.82
CDH8-206ENST00000580044 PLSCR2Q9NRY7 297 aa9.94□□□□□ -0.82
CDH8-206ENST00000580044 POTEGQ6S5H5 508 aa9.92□□□□□ -0.82
CDH8-206ENST00000580044 PCDH10Q9P2E7 1040 aa9.92□□□□□ -0.82
CDH8-206ENST00000580044 SLAIN1Q8ND83 568 aa9.91□□□□□ -0.82
CDH8-206ENST00000580044 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
CDH8-206ENST00000580044 PSEN1P49768 467 aa9.89□□□□□ -0.83
CDH8-206ENST00000580044 IFNLR1Q8IU57 520 aaPredicted RBP9.89□□□□□ -0.83
CDH8-206ENST00000580044 IRX5P78411 483 aaPredicted RBP9.88□□□□□ -0.83
CDH8-206ENST00000580044 PDAP1Q13442 181 aaKnown RBP9.88□□□□□ -0.83
CDH8-206ENST00000580044 L3MBTL3Q96JM7 780 aaPredicted RBP9.88□□□□□ -0.83
CDH8-206ENST00000580044 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.88□□□□□ -0.83
CDH8-206ENST00000580044 G3V3G9 751 aa9.87□□□□□ -0.83
CDH8-206ENST00000580044 SNPHO15079 494 aa9.86□□□□□ -0.83
CDH8-206ENST00000580044 C3orf67Q6ZVT6 689 aa9.84□□□□□ -0.83
CDH8-206ENST00000580044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDH8-206ENST00000580044 CABP2Q9NPB3 220 aa9.77□□□□□ -0.85
CDH8-206ENST00000580044 TAOK2Q9UL54 1235 aa9.76□□□□□ -0.85
CDH8-206ENST00000580044 TMEM121BQ9BXQ6 578 aaPredicted RBP9.72□□□□□ -0.85
CDH8-206ENST00000580044 PDCD7Q8N8D1 485 aaKnown RBP9.71□□□□□ -0.86
CDH8-206ENST00000580044 ST18O60284 1047 aa9.69□□□□□ -0.86
CDH8-206ENST00000580044 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
CDH8-206ENST00000580044 LCE2DQ5TA82 110 aaPredicted RBP9.66□□□□□ -0.86
CDH8-206ENST00000580044 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
CDH8-206ENST00000580044 BOLA1Q9Y3E2 137 aa9.66□□□□□ -0.86
CDH8-206ENST00000580044 VGFO15240 615 aaPredicted RBP9.65□□□□□ -0.86
CDH8-206ENST00000580044 SOX12O15370 315 aa9.61□□□□□ -0.87
CDH8-206ENST00000580044 EFCAB3Q8N7B9 438 aa9.61□□□□□ -0.87
CDH8-206ENST00000580044 ILDR1Q86SU0 546 aaPredicted RBP9.59□□□□□ -0.87
CDH8-206ENST00000580044 ZNF710Q8N1W2 664 aa9.59□□□□□ -0.87
CDH8-206ENST00000580044 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
CDH8-206ENST00000580044 EMP3P54852 163 aa9.58□□□□□ -0.88
CDH8-206ENST00000580044 DPY19L2Q6NUT2 758 aa9.58□□□□□ -0.88
CDH8-206ENST00000580044 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.56□□□□□ -0.88
CDH8-206ENST00000580044 DOK7Q18PE1 504 aa9.56□□□□□ -0.88
CDH8-206ENST00000580044 ZFP91Q96JP5 570 aaPredicted RBP9.56□□□□□ -0.88
CDH8-206ENST00000580044 MARVELD3Q96A59 401 aa9.55□□□□□ -0.88
CDH8-206ENST00000580044 ECM2O94769 699 aaPredicted RBP9.53□□□□□ -0.88
CDH8-206ENST00000580044 NLRP6P59044 892 aa9.52□□□□□ -0.89
CDH8-206ENST00000580044 STK24Q9Y6E0 443 aa9.51□□□□□ -0.89
CDH8-206ENST00000580044 BCL11BQ9C0K0 894 aaPredicted RBP9.49□□□□□ -0.89
CDH8-206ENST00000580044 FAM205CA6NFA0 338 aa9.48□□□□□ -0.89
CDH8-206ENST00000580044 STK25O00506 426 aa9.48□□□□□ -0.89
CDH8-206ENST00000580044 RNF25Q96BH1 459 aaPredicted RBP9.48□□□□□ -0.89
CDH8-206ENST00000580044 MICALL2Q8IY33 904 aa9.47□□□□□ -0.89
CDH8-206ENST00000580044 PHF8Q9UPP1 1060 aa9.46□□□□□ -0.9
CDH8-206ENST00000580044 HS3ST6Q96QI5 342 aa9.44□□□□□ -0.9
CDH8-206ENST00000580044 ERBB3P21860 1342 aa9.44□□□□□ -0.9
CDH8-206ENST00000580044 ZSWIM6Q9HCJ5 1215 aa9.42□□□□□ -0.9
CDH8-206ENST00000580044 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
CDH8-206ENST00000580044 HOXB3P14651 431 aaPredicted RBP9.39□□□□□ -0.91
CDH8-206ENST00000580044 SPNS2Q8IVW8 549 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms