RNA–Protein interactions for RNA: ENST00000579815.1

CLTC-211, Transcript of clathrin heavy chain, humanhuman

TSL 5

Gene CLTC, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-211ENST00000579815 CCDC61Q9Y6R9 512 aa13.18□□□□□ -0.3
CLTC-211ENST00000579815 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
CLTC-211ENST00000579815 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
CLTC-211ENST00000579815 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
CLTC-211ENST00000579815 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
CLTC-211ENST00000579815 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
CLTC-211ENST00000579815 MAP3K13O43283 966 aa13.03□□□□□ -0.32
CLTC-211ENST00000579815 TRPC6Q9Y210 931 aa13.03□□□□□ -0.32
CLTC-211ENST00000579815 CLCN6P51797 869 aa13.01□□□□□ -0.33
CLTC-211ENST00000579815 FAM212AQ96EL1 285 aa13□□□□□ -0.33
CLTC-211ENST00000579815 DCBLD2Q96PD2 775 aa12.99□□□□□ -0.33
CLTC-211ENST00000579815 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
CLTC-211ENST00000579815 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.33
CLTC-211ENST00000579815 PYGBP11216 843 aa12.94□□□□□ -0.34
CLTC-211ENST00000579815 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
CLTC-211ENST00000579815 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
CLTC-211ENST00000579815 ATMINO43313 823 aaPredicted RBP12.89□□□□□ -0.35
CLTC-211ENST00000579815 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
CLTC-211ENST00000579815 BMP2KQ9NSY1 1161 aaPredicted RBP12.88□□□□□ -0.35
CLTC-211ENST00000579815 ASTLQ6HA08 431 aaPredicted RBP12.87□□□□□ -0.35
CLTC-211ENST00000579815 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
CLTC-211ENST00000579815 GSE1Q14687 1217 aa12.82□□□□□ -0.36
CLTC-211ENST00000579815 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
CLTC-211ENST00000579815 PCDHB8Q9UN66 801 aa12.82□□□□□ -0.36
CLTC-211ENST00000579815 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
CLTC-211ENST00000579815 TTLL13PA6NNM8 815 aa12.79□□□□□ -0.36
CLTC-211ENST00000579815 LHX8Q68G74 356 aa12.78□□□□□ -0.36
CLTC-211ENST00000579815 POTEB2H3BUK9 544 aa12.77□□□□□ -0.37
CLTC-211ENST00000579815 TIE1P35590 1138 aa12.77□□□□□ -0.37
CLTC-211ENST00000579815 METRNQ9UJH8 293 aa12.73□□□□□ -0.37
CLTC-211ENST00000579815 CHRM1P11229 460 aaPredicted RBP12.72□□□□□ -0.37
CLTC-211ENST00000579815 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
CLTC-211ENST00000579815 POTEFA5A3E0 1075 aa12.71□□□□□ -0.37
CLTC-211ENST00000579815 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
CLTC-211ENST00000579815 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
CLTC-211ENST00000579815 POTEJP0CG39 1038 aa12.67□□□□□ -0.38
CLTC-211ENST00000579815 COLQQ9Y215 455 aaPredicted RBP12.66□□□□□ -0.38
CLTC-211ENST00000579815 C7P10643 843 aa12.65□□□□□ -0.38
CLTC-211ENST00000579815 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
CLTC-211ENST00000579815 RNF25Q96BH1 459 aaPredicted RBP12.63□□□□□ -0.39
CLTC-211ENST00000579815 PSEN1P49768 467 aa12.6□□□□□ -0.39
CLTC-211ENST00000579815 OTUD5Q96G74 571 aa12.58□□□□□ -0.4
CLTC-211ENST00000579815 PKD2Q13563 968 aa12.55□□□□□ -0.4
CLTC-211ENST00000579815 PDAP1Q13442 181 aaKnown RBP12.54□□□□□ -0.4
CLTC-211ENST00000579815 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
CLTC-211ENST00000579815 IER5LQ5T953 404 aa12.52□□□□□ -0.41
CLTC-211ENST00000579815 TRIM41Q8WV44 630 aa12.52□□□□□ -0.41
CLTC-211ENST00000579815 SEC24BO95487 1268 aa12.5□□□□□ -0.41
CLTC-211ENST00000579815 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
CLTC-211ENST00000579815 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
CLTC-211ENST00000579815 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
CLTC-211ENST00000579815 RGL2O15211 777 aa12.44□□□□□ -0.42
CLTC-211ENST00000579815 PLCG2P16885 1265 aa12.44□□□□□ -0.42
CLTC-211ENST00000579815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
CLTC-211ENST00000579815 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
CLTC-211ENST00000579815 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
CLTC-211ENST00000579815 OCEL1Q9H607 264 aa12.4□□□□□ -0.42
CLTC-211ENST00000579815 MKRN3Q13064 507 aaKnown RBP12.39□□□□□ -0.43
CLTC-211ENST00000579815 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
CLTC-211ENST00000579815 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
CLTC-211ENST00000579815 DPY19L2Q6NUT2 758 aa12.37□□□□□ -0.43
CLTC-211ENST00000579815 EFCAB3Q8N7B9 438 aa12.37□□□□□ -0.43
CLTC-211ENST00000579815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.36□□□□□ -0.431e-11■□□□□ 11.3
CLTC-211ENST00000579815 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
CLTC-211ENST00000579815 MAMSTRQ6ZN01 415 aa12.31□□□□□ -0.44
CLTC-211ENST00000579815 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
CLTC-211ENST00000579815 SCUBE2Q9NQ36 999 aa12.31□□□□□ -0.44
CLTC-211ENST00000579815 MS4A4AQ96JQ5 239 aa12.26□□□□□ -0.45
CLTC-211ENST00000579815 STK24Q9Y6E0 443 aa12.26□□□□□ -0.45
CLTC-211ENST00000579815 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
CLTC-211ENST00000579815 STK25O00506 426 aa12.24□□□□□ -0.45
CLTC-211ENST00000579815 LCE2DQ5TA82 110 aaPredicted RBP12.22□□□□□ -0.45
CLTC-211ENST00000579815 SLAIN1Q8ND83 568 aa12.21□□□□□ -0.45
CLTC-211ENST00000579815 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
CLTC-211ENST00000579815 MFRPQ9BY79 579 aa12.17□□□□□ -0.46
CLTC-211ENST00000579815 SOX12O15370 315 aa12.16□□□□□ -0.46
CLTC-211ENST00000579815 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
CLTC-211ENST00000579815 BOLA1Q9Y3E2 137 aa12.16□□□□□ -0.46
CLTC-211ENST00000579815 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.14□□□□□ -0.47
CLTC-211ENST00000579815 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
CLTC-211ENST00000579815 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
CLTC-211ENST00000579815 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
CLTC-211ENST00000579815 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
CLTC-211ENST00000579815 TMEM121BQ9BXQ6 578 aaPredicted RBP12.1□□□□□ -0.47
CLTC-211ENST00000579815 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
CLTC-211ENST00000579815 TMEM92Q6UXU6 159 aa12.08□□□□□ -0.48
CLTC-211ENST00000579815 HS6ST3Q8IZP7 471 aa12.08□□□□□ -0.48
CLTC-211ENST00000579815 NLRP6P59044 892 aa12.07□□□□□ -0.48
CLTC-211ENST00000579815 PPP1R37O75864 691 aa12.04□□□□□ -0.48
CLTC-211ENST00000579815 NKX1-1Q15270 411 aaPredicted RBP12.04□□□□□ -0.48
CLTC-211ENST00000579815 POTEMA6NI47 508 aa12.02□□□□□ -0.49
CLTC-211ENST00000579815 G3V3G9 751 aa12.02□□□□□ -0.49
CLTC-211ENST00000579815 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
CLTC-211ENST00000579815 ST18O60284 1047 aa12.01□□□□□ -0.49
CLTC-211ENST00000579815 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
CLTC-211ENST00000579815 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
CLTC-211ENST00000579815 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
CLTC-211ENST00000579815 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
CLTC-211ENST00000579815 MARVELD3Q96A59 401 aa11.9□□□□□ -0.5
CLTC-211ENST00000579815 SNPHO15079 494 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms