RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 ATMINO43313 823 aaPredicted RBP14.28□□□□□ -0.12
COPS3-216ENST00000579716 POTEJP0CG39 1038 aa14.27□□□□□ -0.13
COPS3-216ENST00000579716 KIF12Q96FN5 646 aa14.26□□□□□ -0.13
COPS3-216ENST00000579716 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
COPS3-216ENST00000579716 MIER1Q8N108 512 aa14.23□□□□□ -0.13
COPS3-216ENST00000579716 TRPC6Q9Y210 931 aa14.23□□□□□ -0.13
COPS3-216ENST00000579716 ATN1P54259 1190 aaPredicted RBP14.17□□□□□ -0.14
COPS3-216ENST00000579716 MAP3K13O43283 966 aa14.15□□□□□ -0.14
COPS3-216ENST00000579716 METRNQ9UJH8 293 aa14.15□□□□□ -0.14
COPS3-216ENST00000579716 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
COPS3-216ENST00000579716 BMP2KQ9NSY1 1161 aaPredicted RBP14.12□□□□□ -0.15
COPS3-216ENST00000579716 C7P10643 843 aa14.11□□□□□ -0.15
COPS3-216ENST00000579716 NUBP1P53384 320 aa14.11□□□□□ -0.15
COPS3-216ENST00000579716 SLC39A7Q92504 469 aa14.1□□□□□ -0.15
COPS3-216ENST00000579716 FKBP8Q14318 412 aa14.07□□□□□ -0.16
COPS3-216ENST00000579716 PLCD3Q8N3E9 789 aa14.04□□□□□ -0.16
COPS3-216ENST00000579716 PLEKHG5O94827 1062 aa14.01□□□□□ -0.17
COPS3-216ENST00000579716 TIE1P35590 1138 aa14□□□□□ -0.17
COPS3-216ENST00000579716 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
COPS3-216ENST00000579716 COLQQ9Y215 455 aaPredicted RBP13.97□□□□□ -0.17
COPS3-216ENST00000579716 LCE2DQ5TA82 110 aaPredicted RBP13.95□□□□□ -0.18
COPS3-216ENST00000579716 IFNL1Q8IU54 200 aa13.92□□□□□ -0.18
COPS3-216ENST00000579716 SGIP1Q9BQI5 828 aa13.92□□□□□ -0.18
COPS3-216ENST00000579716 PCDHB13Q9Y5F0 798 aa13.9□□□□□ -0.18
COPS3-216ENST00000579716 POTEMA6NI47 508 aa13.89□□□□□ -0.19
COPS3-216ENST00000579716 POTEGQ6S5H5 508 aa13.86□□□□□ -0.19
COPS3-216ENST00000579716 ZBTB47Q9UFB7 747 aaPredicted RBP13.85□□□□□ -0.19
COPS3-216ENST00000579716 TRIM35Q9UPQ4 493 aa13.85□□□□□ -0.19
COPS3-216ENST00000579716 MAMSTRQ6ZN01 415 aa13.84□□□□□ -0.19
COPS3-216ENST00000579716 PLSCR2Q9NRY7 297 aa13.82□□□□□ -0.2
COPS3-216ENST00000579716 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
COPS3-216ENST00000579716 IER5LQ5T953 404 aa13.77□□□□□ -0.21
COPS3-216ENST00000579716 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
COPS3-216ENST00000579716 SCUBE2Q9NQ36 999 aa13.76□□□□□ -0.21
COPS3-216ENST00000579716 PYGBP11216 843 aa13.74□□□□□ -0.21
COPS3-216ENST00000579716 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
COPS3-216ENST00000579716 SEC24BO95487 1268 aa13.73□□□□□ -0.21
COPS3-216ENST00000579716 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
COPS3-216ENST00000579716 IRX5P78411 483 aaPredicted RBP13.7□□□□□ -0.22
COPS3-216ENST00000579716 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
COPS3-216ENST00000579716 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
COPS3-216ENST00000579716 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
COPS3-216ENST00000579716 PCDH10Q9P2E7 1040 aa13.58□□□□□ -0.24
COPS3-216ENST00000579716 PLCG2P16885 1265 aa13.56□□□□□ -0.24
COPS3-216ENST00000579716 SLAIN1Q8ND83 568 aa13.55□□□□□ -0.24
COPS3-216ENST00000579716 OCEL1Q9H607 264 aa13.55□□□□□ -0.24
COPS3-216ENST00000579716 CHRM1P11229 460 aaPredicted RBP13.54□□□□□ -0.24
COPS3-216ENST00000579716 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
COPS3-216ENST00000579716 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
COPS3-216ENST00000579716 ST18O60284 1047 aa13.5□□□□□ -0.25
COPS3-216ENST00000579716 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
COPS3-216ENST00000579716 GSE1Q14687 1217 aa13.49□□□□□ -0.25
COPS3-216ENST00000579716 ZNF467Q7Z7K2 595 aaPredicted RBP13.43□□□□□ -0.26
COPS3-216ENST00000579716 PSEN1P49768 467 aa13.41□□□□□ -0.26
COPS3-216ENST00000579716 ILDR1Q86SU0 546 aaPredicted RBP13.41□□□□□ -0.26
COPS3-216ENST00000579716 CDAN1Q8IWY9 1227 aa13.4□□□□□ -0.26
COPS3-216ENST00000579716 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
COPS3-216ENST00000579716 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
COPS3-216ENST00000579716 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
COPS3-216ENST00000579716 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.33□□□□□ -0.28
COPS3-216ENST00000579716 MKRN3Q13064 507 aaKnown RBP13.31□□□□□ -0.28
COPS3-216ENST00000579716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.28
COPS3-216ENST00000579716 PDAP1Q13442 181 aaKnown RBP13.3□□□□□ -0.28
COPS3-216ENST00000579716 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
COPS3-216ENST00000579716 MARVELD3Q96A59 401 aa13.25□□□□□ -0.29
COPS3-216ENST00000579716 L3MBTL3Q96JM7 780 aaPredicted RBP13.24□□□□□ -0.29
COPS3-216ENST00000579716 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
COPS3-216ENST00000579716 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
COPS3-216ENST00000579716 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
COPS3-216ENST00000579716 POTEB3A0JP26 581 aa13.22□□□□□ -0.29
COPS3-216ENST00000579716 POTEBQ6S5H4 581 aa13.22□□□□□ -0.29
COPS3-216ENST00000579716 SNPHO15079 494 aa13.19□□□□□ -0.3
COPS3-216ENST00000579716 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
COPS3-216ENST00000579716 HOXB3P14651 431 aaPredicted RBP13.13□□□□□ -0.31
COPS3-216ENST00000579716 SPNS2Q8IVW8 549 aa13.13□□□□□ -0.31
COPS3-216ENST00000579716 RNF25Q96BH1 459 aaPredicted RBP13.13□□□□□ -0.31
COPS3-216ENST00000579716 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
COPS3-216ENST00000579716 BOLA1Q9Y3E2 137 aa13.12□□□□□ -0.31
COPS3-216ENST00000579716 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
COPS3-216ENST00000579716 KRTAP3-3Q9BYR6 98 aa13.07□□□□□ -0.32
COPS3-216ENST00000579716 KRTAP3-2Q9BYR7 98 aa13.07□□□□□ -0.32
COPS3-216ENST00000579716 TMEM92Q6UXU6 159 aa13.04□□□□□ -0.32
COPS3-216ENST00000579716 EMP3P54852 163 aa13.03□□□□□ -0.32
COPS3-216ENST00000579716 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
COPS3-216ENST00000579716 MS4A4AQ96JQ5 239 aa13.03□□□□□ -0.32
COPS3-216ENST00000579716 HS3ST6Q96QI5 342 aa13.03□□□□□ -0.32
COPS3-216ENST00000579716 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
COPS3-216ENST00000579716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.97□□□□□ -0.33
COPS3-216ENST00000579716 RIOK3O14730 519 aaKnown RBP12.97□□□□□ -0.33
COPS3-216ENST00000579716 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
COPS3-216ENST00000579716 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
COPS3-216ENST00000579716 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
COPS3-216ENST00000579716 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
COPS3-216ENST00000579716 SOX12O15370 315 aa12.91□□□□□ -0.34
COPS3-216ENST00000579716 G3V3G9 751 aa12.89□□□□□ -0.35
COPS3-216ENST00000579716 VGFO15240 615 aaPredicted RBP12.88□□□□□ -0.35
COPS3-216ENST00000579716 FBXO22Q8NEZ5 403 aa12.85□□□□□ -0.35
COPS3-216ENST00000579716 DOK7Q18PE1 504 aa12.83□□□□□ -0.36
COPS3-216ENST00000579716 GPR153Q6NV75 609 aa12.83□□□□□ -0.36
COPS3-216ENST00000579716 ZNF710Q8N1W2 664 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms