RNA–Protein interactions for RNA: ENST00000579511.1

DDX42-209, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-209ENST00000579511 CLCN6P51797 869 aa12.97□□□□□ -0.33
DDX42-209ENST00000579511 CCDC61Q9Y6R9 512 aa12.96□□□□□ -0.33
DDX42-209ENST00000579511 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
DDX42-209ENST00000579511 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
DDX42-209ENST00000579511 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
DDX42-209ENST00000579511 GALR2O43603 387 aaPredicted RBP12.88□□□□□ -0.35
DDX42-209ENST00000579511 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
DDX42-209ENST00000579511 MAP3K13O43283 966 aa12.81□□□□□ -0.36
DDX42-209ENST00000579511 GSE1Q14687 1217 aa12.81□□□□□ -0.36
DDX42-209ENST00000579511 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
DDX42-209ENST00000579511 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
DDX42-209ENST00000579511 DCBLD2Q96PD2 775 aa12.78□□□□□ -0.36
DDX42-209ENST00000579511 PYGBP11216 843 aa12.76□□□□□ -0.37
DDX42-209ENST00000579511 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
DDX42-209ENST00000579511 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
DDX42-209ENST00000579511 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
DDX42-209ENST00000579511 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
DDX42-209ENST00000579511 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
DDX42-209ENST00000579511 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
DDX42-209ENST00000579511 ASTLQ6HA08 431 aaPredicted RBP12.64□□□□□ -0.39
DDX42-209ENST00000579511 ATMINO43313 823 aaPredicted RBP12.63□□□□□ -0.39
DDX42-209ENST00000579511 BMP2KQ9NSY1 1161 aaPredicted RBP12.62□□□□□ -0.39
DDX42-209ENST00000579511 PCDHB8Q9UN66 801 aa12.62□□□□□ -0.39
DDX42-209ENST00000579511 TIE1P35590 1138 aa12.61□□□□□ -0.39
DDX42-209ENST00000579511 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
DDX42-209ENST00000579511 ATN1P54259 1190 aaPredicted RBP12.58□□□□□ -0.4
DDX42-209ENST00000579511 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
DDX42-209ENST00000579511 TTLL13PA6NNM8 815 aa12.57□□□□□ -0.4
DDX42-209ENST00000579511 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
DDX42-209ENST00000579511 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
DDX42-209ENST00000579511 SLC39A7Q92504 469 aa12.49□□□□□ -0.41
DDX42-209ENST00000579511 C7P10643 843 aa12.48□□□□□ -0.41
DDX42-209ENST00000579511 PKD2Q13563 968 aa12.48□□□□□ -0.41
DDX42-209ENST00000579511 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
DDX42-209ENST00000579511 METRNQ9UJH8 293 aa12.47□□□□□ -0.41
DDX42-209ENST00000579511 PSEN1P49768 467 aa12.46□□□□□ -0.41
DDX42-209ENST00000579511 PDAP1Q13442 181 aaKnown RBP12.45□□□□□ -0.42
DDX42-209ENST00000579511 LHX8Q68G74 356 aa12.45□□□□□ -0.42
DDX42-209ENST00000579511 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
DDX42-209ENST00000579511 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
DDX42-209ENST00000579511 RIOK3O14730 519 aaKnown RBP12.42□□□□□ -0.42
DDX42-209ENST00000579511 IER5LQ5T953 404 aa12.39□□□□□ -0.43
DDX42-209ENST00000579511 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
DDX42-209ENST00000579511 POTEFA5A3E0 1075 aa12.36□□□□□ -0.43
DDX42-209ENST00000579511 COLQQ9Y215 455 aaPredicted RBP12.36□□□□□ -0.43
DDX42-209ENST00000579511 SEC24BO95487 1268 aa12.35□□□□□ -0.43
DDX42-209ENST00000579511 RGL2O15211 777 aa12.33□□□□□ -0.44
DDX42-209ENST00000579511 VGFO15240 615 aaPredicted RBP12.33□□□□□ -0.44
DDX42-209ENST00000579511 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
DDX42-209ENST00000579511 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.31□□□□□ -0.44
DDX42-209ENST00000579511 ZFP91Q96JP5 570 aaPredicted RBP12.31□□□□□ -0.44
DDX42-209ENST00000579511 IRX5P78411 483 aaPredicted RBP12.3□□□□□ -0.44
DDX42-209ENST00000579511 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
DDX42-209ENST00000579511 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
DDX42-209ENST00000579511 POTEJP0CG39 1038 aa12.28□□□□□ -0.44
DDX42-209ENST00000579511 PLCG2P16885 1265 aa12.27□□□□□ -0.45
DDX42-209ENST00000579511 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
DDX42-209ENST00000579511 TAOK2Q9UL54 1235 aa12.27□□□□□ -0.45
DDX42-209ENST00000579511 OTUD5Q96G74 571 aa12.23□□□□□ -0.45
DDX42-209ENST00000579511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.459e-13■□□□□ 9.6
DDX42-209ENST00000579511 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
DDX42-209ENST00000579511 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
DDX42-209ENST00000579511 PDCD7Q8N8D1 485 aaKnown RBP12.2□□□□□ -0.46
DDX42-209ENST00000579511 STK25O00506 426 aa12.19□□□□□ -0.46
DDX42-209ENST00000579511 ILDR1Q86SU0 546 aaPredicted RBP12.19□□□□□ -0.46
DDX42-209ENST00000579511 MAMSTRQ6ZN01 415 aa12.18□□□□□ -0.46
DDX42-209ENST00000579511 STK24Q9Y6E0 443 aa12.18□□□□□ -0.46
DDX42-209ENST00000579511 SCUBE2Q9NQ36 999 aa12.14□□□□□ -0.47
DDX42-209ENST00000579511 SOX12O15370 315 aa12.12□□□□□ -0.47
DDX42-209ENST00000579511 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
DDX42-209ENST00000579511 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
DDX42-209ENST00000579511 PHF8Q9UPP1 1060 aa12.08□□□□□ -0.48
DDX42-209ENST00000579511 CHGAP10645 457 aaKnown RBP12.06□□□□□ -0.48
DDX42-209ENST00000579511 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
DDX42-209ENST00000579511 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
DDX42-209ENST00000579511 MS4A4AQ96JQ5 239 aa12.04□□□□□ -0.48
DDX42-209ENST00000579511 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
DDX42-209ENST00000579511 NLRP6P59044 892 aa12.03□□□□□ -0.48
DDX42-209ENST00000579511 MFRPQ9BY79 579 aa12.03□□□□□ -0.48
DDX42-209ENST00000579511 FBXO22Q8NEZ5 403 aa12.02□□□□□ -0.49
DDX42-209ENST00000579511 BOLA1Q9Y3E2 137 aa12.02□□□□□ -0.49
DDX42-209ENST00000579511 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
DDX42-209ENST00000579511 EIF2AK3Q9NZJ5 1116 aaKnown RBP12□□□□□ -0.49
DDX42-209ENST00000579511 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
DDX42-209ENST00000579511 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
DDX42-209ENST00000579511 G3V3G9 751 aa11.98□□□□□ -0.49
DDX42-209ENST00000579511 TMEM121BQ9BXQ6 578 aaPredicted RBP11.97□□□□□ -0.49
DDX42-209ENST00000579511 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
DDX42-209ENST00000579511 MICALL2Q8IY33 904 aa11.93□□□□□ -0.5
DDX42-209ENST00000579511 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
DDX42-209ENST00000579511 PPP1R37O75864 691 aa11.86□□□□□ -0.51
DDX42-209ENST00000579511 FAM163AQ96GL9 167 aaPredicted RBP11.85□□□□□ -0.51
DDX42-209ENST00000579511 TMEM92Q6UXU6 159 aa11.81□□□□□ -0.52
DDX42-209ENST00000579511 LCE2DQ5TA82 110 aaPredicted RBP11.79□□□□□ -0.52
DDX42-209ENST00000579511 RYDENQ9NUL5 291 aaKnown RBP11.79□□□□□ -0.52
DDX42-209ENST00000579511 SNPHO15079 494 aa11.78□□□□□ -0.52
DDX42-209ENST00000579511 GTPBP6O43824 516 aaPredicted RBP11.77□□□□□ -0.53
DDX42-209ENST00000579511 ST18O60284 1047 aa11.73□□□□□ -0.53
DDX42-209ENST00000579511 BBXQ8WY36 941 aaPredicted RBP11.73□□□□□ -0.53
DDX42-209ENST00000579511 KIF3CO14782 793 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms