RNA–Protein interactions for RNA: ENST00000579458.1

PCAT18-201, prostate cancer associated transcript 18, humanhuman

TSL 2 BASIC

Gene PCAT18, Length 2,598 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT18-201ENST00000579458 RAD21O60216 631 aa14.64□□□□□ -0.07
PCAT18-201ENST00000579458 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
PCAT18-201ENST00000579458 IRX6P78412 446 aaPredicted RBP14.63□□□□□ -0.07
PCAT18-201ENST00000579458 KCTD17Q8N5Z5 321 aa14.63□□□□□ -0.07
PCAT18-201ENST00000579458 PKNOX2Q96KN3 472 aa14.63□□□□□ -0.07
PCAT18-201ENST00000579458 RSPH6AQ9H0K4 717 aa14.63□□□□□ -0.07
PCAT18-201ENST00000579458 MTMR7Q9Y216 660 aa14.6□□□□□ -0.07
PCAT18-201ENST00000579458 FOXD4L5Q5VV16 416 aaPredicted RBP14.6□□□□□ -0.07
PCAT18-201ENST00000579458 FOXD4L4Q8WXT5 416 aaPredicted RBP14.6□□□□□ -0.07
PCAT18-201ENST00000579458 RGS22Q8NE09 1264 aa14.57□□□□□ -0.08
PCAT18-201ENST00000579458 RBM25P49756 843 aaKnown RBP14.56□□□□□ -0.08
PCAT18-201ENST00000579458 NEUROD2Q15784 382 aa14.53□□□□□ -0.08
PCAT18-201ENST00000579458 CCDC136Q96JN2 1154 aa14.52□□□□□ -0.09
PCAT18-201ENST00000579458 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
PCAT18-201ENST00000579458 BRPF3Q9ULD4 1205 aa14.5□□□□□ -0.09
PCAT18-201ENST00000579458 FGD1P98174 961 aa14.48□□□□□ -0.09
PCAT18-201ENST00000579458 VASPP50552 380 aaPredicted RBP14.47□□□□□ -0.09
PCAT18-201ENST00000579458 PIAS4Q8N2W9 510 aaPredicted RBP14.46□□□□□ -0.09
PCAT18-201ENST00000579458 APBB1O00213 710 aa14.44□□□□□ -0.1
PCAT18-201ENST00000579458 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
PCAT18-201ENST00000579458 BCCIPQ9P287 314 aaKnown RBP eCLIP14.4□□□□□ -0.1
PCAT18-201ENST00000579458 USP35Q9P2H5 1018 aa14.4□□□□□ -0.1
PCAT18-201ENST00000579458 CWC22Q9HCG8 908 aaKnown RBP14.39□□□□□ -0.11
PCAT18-201ENST00000579458 FAM177A1Q8N128 213 aaPredicted RBP14.38□□□□□ -0.11
PCAT18-201ENST00000579458 ZNF592Q92610 1267 aa14.38□□□□□ -0.11
PCAT18-201ENST00000579458 A0A0U1RQG5 324 aaPredicted RBP14.36□□□□□ -0.11
PCAT18-201ENST00000579458 RGL2O15211 777 aa14.36□□□□□ -0.11
PCAT18-201ENST00000579458 TMED8Q6PL24 325 aaPredicted RBP14.36□□□□□ -0.11
PCAT18-201ENST00000579458 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
PCAT18-201ENST00000579458 ECM2O94769 699 aaPredicted RBP14.31□□□□□ -0.12
PCAT18-201ENST00000579458 RSPH4AQ5TD94 716 aa14.3□□□□□ -0.12
PCAT18-201ENST00000579458 LMOD2Q6P5Q4 547 aa14.29□□□□□ -0.12
PCAT18-201ENST00000579458 CERS3Q8IU89 383 aa14.29□□□□□ -0.12
PCAT18-201ENST00000579458 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.29□□□□□ -0.12
PCAT18-201ENST00000579458 RB1CC1Q8TDY2 1594 aa14.28□□□□□ -0.12
PCAT18-201ENST00000579458 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
PCAT18-201ENST00000579458 MFAP1P55081 439 aaKnown RBP14.24□□□□□ -0.13
PCAT18-201ENST00000579458 TICAM2Q86XR7 235 aa14.23□□□□□ -0.13
PCAT18-201ENST00000579458 NACADO15069 1562 aa14.22□□□□□ -0.13
PCAT18-201ENST00000579458 PPM1GO15355 546 aaPredicted RBP14.22□□□□□ -0.13
PCAT18-201ENST00000579458 SLC24A3Q9HC58 644 aa14.22□□□□□ -0.13
PCAT18-201ENST00000579458 CHGAP10645 457 aaKnown RBP14.21□□□□□ -0.13
PCAT18-201ENST00000579458 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
PCAT18-201ENST00000579458 TMCO4Q5TGY1 634 aa14.18□□□□□ -0.14
PCAT18-201ENST00000579458 ZEB1P37275 1124 aaPredicted RBP14.16□□□□□ -0.14
PCAT18-201ENST00000579458 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
PCAT18-201ENST00000579458 ZNF526Q8TF50 670 aaPredicted RBP14.15□□□□□ -0.14
PCAT18-201ENST00000579458 PSMD1Q99460 953 aa14.14□□□□□ -0.15
PCAT18-201ENST00000579458 GZF1Q9H116 711 aaPredicted RBP14.13□□□□□ -0.15
PCAT18-201ENST00000579458 ARID4BQ4LE39 1312 aaPredicted RBP14.11□□□□□ -0.15
PCAT18-201ENST00000579458 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
PCAT18-201ENST00000579458 E9PSI1 815 aa14.1□□□□□ -0.15
PCAT18-201ENST00000579458 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
PCAT18-201ENST00000579458 MKRN3Q13064 507 aaKnown RBP14.09□□□□□ -0.15
PCAT18-201ENST00000579458 CLSTN1O94985 981 aa14.07□□□□□ -0.16
PCAT18-201ENST00000579458 NAP1L5Q96NT1 182 aaPredicted RBP14.07□□□□□ -0.16
PCAT18-201ENST00000579458 MYO15BQ96JP2 1530 aa14.07□□□□□ -0.16
PCAT18-201ENST00000579458 UNC13AQ9UPW8 1703 aa14.05□□□□□ -0.16
PCAT18-201ENST00000579458 ANO8Q9HCE9 1232 aaPredicted RBP14.05□□□□□ -0.16
PCAT18-201ENST00000579458 PRDM10Q9NQV6 1147 aa14.05□□□□□ -0.16
PCAT18-201ENST00000579458 ZCCHC6Q5VYS8 1495 aaKnown RBP14.04□□□□□ -0.16
PCAT18-201ENST00000579458 KDM4AO75164 1064 aa14.03□□□□□ -0.16
PCAT18-201ENST00000579458 ZNF326Q5BKZ1 582 aaKnown RBP14.03□□□□□ -0.16
PCAT18-201ENST00000579458 IL27Q8NEV9 243 aa14.02□□□□□ -0.16
PCAT18-201ENST00000579458 GPBP1L1Q9HC44 474 aaPredicted RBP14.02□□□□□ -0.16
PCAT18-201ENST00000579458 ZC3H15Q8WU90 426 aaKnown RBP14.02□□□□□ -0.17
PCAT18-201ENST00000579458 TRAIPQ9BWF2 469 aa14.01□□□□□ -0.17
PCAT18-201ENST00000579458 ZNF316A6NFI3 1004 aaPredicted RBP14□□□□□ -0.17
PCAT18-201ENST00000579458 AAMPQ13685 434 aa13.98□□□□□ -0.17
PCAT18-201ENST00000579458 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
PCAT18-201ENST00000579458 CC2D2BQ6DHV5 1058 aa13.97□□□□□ -0.17
PCAT18-201ENST00000579458 ATF5Q9Y2D1 282 aaPredicted RBP13.96□□□□□ -0.17
PCAT18-201ENST00000579458 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
PCAT18-201ENST00000579458 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCAT18-201ENST00000579458 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
PCAT18-201ENST00000579458 BICRAQ9NZM4 1560 aa13.91□□□□□ -0.18
PCAT18-201ENST00000579458 IRF5Q13568 498 aa13.89□□□□□ -0.19
PCAT18-201ENST00000579458 CCDC125Q86Z20 511 aa13.87□□□□□ -0.19
PCAT18-201ENST00000579458 NKX1-1Q15270 411 aaPredicted RBP13.86□□□□□ -0.19
PCAT18-201ENST00000579458 WDR70Q9NW82 654 aa13.85□□□□□ -0.19
PCAT18-201ENST00000579458 CLUAP1Q96AJ1 413 aa13.84□□□□□ -0.19
PCAT18-201ENST00000579458 NCLP19338 710 aaKnown RBP13.83□□□□□ -0.2
PCAT18-201ENST00000579458 TEX2Q8IWB9 1127 aa13.83□□□□□ -0.2
PCAT18-201ENST00000579458 RETREG2Q8NC44 543 aa13.82□□□□□ -0.2
PCAT18-201ENST00000579458 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
PCAT18-201ENST00000579458 CNPY4Q8N129 248 aa13.82□□□□□ -0.2
PCAT18-201ENST00000579458 KCNV2Q8TDN2 545 aa13.82□□□□□ -0.2
PCAT18-201ENST00000579458 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
PCAT18-201ENST00000579458 CADPSQ9ULU8 1353 aa13.8□□□□□ -0.2
PCAT18-201ENST00000579458 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
PCAT18-201ENST00000579458 SCRIBQ14160 1630 aa13.78□□□□□ -0.2
PCAT18-201ENST00000579458 SPDYE4A6NLX3 237 aa13.78□□□□□ -0.2
PCAT18-201ENST00000579458 FOXD1Q16676 465 aa13.77□□□□□ -0.21
PCAT18-201ENST00000579458 PROM2Q8N271 834 aa13.75□□□□□ -0.21
PCAT18-201ENST00000579458 HS6ST3Q8IZP7 471 aa13.74□□□□□ -0.21
PCAT18-201ENST00000579458 GTPBP6O43824 516 aaPredicted RBP13.73□□□□□ -0.21
PCAT18-201ENST00000579458 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
PCAT18-201ENST00000579458 PLCD4Q9BRC7 762 aa13.72□□□□□ -0.21
PCAT18-201ENST00000579458 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
PCAT18-201ENST00000579458 UNCXA6NJT0 531 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms