RNA–Protein interactions for RNA: ENST00000578412.1

TOP2A-204, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-204ENST00000578412 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
TOP2A-204ENST00000578412 KLHL34Q8N239 644 aa11.4□□□□□ -0.58
TOP2A-204ENST00000578412 DCBLD2Q96PD2 775 aa11.4□□□□□ -0.58
TOP2A-204ENST00000578412 NUBP1P53384 320 aa11.36□□□□□ -0.59
TOP2A-204ENST00000578412 CCDC61Q9Y6R9 512 aa11.35□□□□□ -0.59
TOP2A-204ENST00000578412 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
TOP2A-204ENST00000578412 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
TOP2A-204ENST00000578412 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
TOP2A-204ENST00000578412 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
TOP2A-204ENST00000578412 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
TOP2A-204ENST00000578412 IFNLR1Q8IU57 520 aaPredicted RBP11.28□□□□□ -0.6
TOP2A-204ENST00000578412 KIF12Q96FN5 646 aa11.27□□□□□ -0.61
TOP2A-204ENST00000578412 MAP3K13O43283 966 aa11.26□□□□□ -0.61
TOP2A-204ENST00000578412 OTUD5Q96G74 571 aa11.25□□□□□ -0.61
TOP2A-204ENST00000578412 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
TOP2A-204ENST00000578412 ATMINO43313 823 aaPredicted RBP11.19□□□□□ -0.62
TOP2A-204ENST00000578412 PYGBP11216 843 aa11.19□□□□□ -0.62
TOP2A-204ENST00000578412 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
TOP2A-204ENST00000578412 PCDHB13Q9Y5F0 798 aa11.19□□□□□ -0.62
TOP2A-204ENST00000578412 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
TOP2A-204ENST00000578412 POTEJP0CG39 1038 aa11.16□□□□□ -0.62
TOP2A-204ENST00000578412 GSE1Q14687 1217 aa11.15□□□□□ -0.62
TOP2A-204ENST00000578412 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
TOP2A-204ENST00000578412 IFNL1Q8IU54 200 aa11.13□□□□□ -0.63
TOP2A-204ENST00000578412 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
TOP2A-204ENST00000578412 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
TOP2A-204ENST00000578412 METRNQ9UJH8 293 aa11.1□□□□□ -0.63
TOP2A-204ENST00000578412 C7P10643 843 aa11.09□□□□□ -0.63
TOP2A-204ENST00000578412 ATN1P54259 1190 aaPredicted RBP11.09□□□□□ -0.63
TOP2A-204ENST00000578412 SLC39A7Q92504 469 aa11.08□□□□□ -0.64
TOP2A-204ENST00000578412 PCDHB8Q9UN66 801 aa11.08□□□□□ -0.64
TOP2A-204ENST00000578412 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
TOP2A-204ENST00000578412 TIE1P35590 1138 aa11.06□□□□□ -0.64
TOP2A-204ENST00000578412 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
TOP2A-204ENST00000578412 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
TOP2A-204ENST00000578412 CHRM1P11229 460 aaPredicted RBP10.99□□□□□ -0.65
TOP2A-204ENST00000578412 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
TOP2A-204ENST00000578412 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
TOP2A-204ENST00000578412 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
TOP2A-204ENST00000578412 PLSCR2Q9NRY7 297 aa10.93□□□□□ -0.66
TOP2A-204ENST00000578412 SEC24BO95487 1268 aa10.92□□□□□ -0.66
TOP2A-204ENST00000578412 COLQQ9Y215 455 aaPredicted RBP10.92□□□□□ -0.66
TOP2A-204ENST00000578412 POTEMA6NI47 508 aa10.91□□□□□ -0.66
TOP2A-204ENST00000578412 PSEN1P49768 467 aa10.9□□□□□ -0.66
TOP2A-204ENST00000578412 MAMSTRQ6ZN01 415 aa10.9□□□□□ -0.66
TOP2A-204ENST00000578412 POTEGQ6S5H5 508 aa10.89□□□□□ -0.67
TOP2A-204ENST00000578412 TRIM41Q8WV44 630 aa10.88□□□□□ -0.67
TOP2A-204ENST00000578412 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
TOP2A-204ENST00000578412 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
TOP2A-204ENST00000578412 IER5LQ5T953 404 aa10.85□□□□□ -0.67
TOP2A-204ENST00000578412 PLCG2P16885 1265 aa10.82□□□□□ -0.68
TOP2A-204ENST00000578412 SCUBE2Q9NQ36 999 aa10.82□□□□□ -0.68
TOP2A-204ENST00000578412 MKRN3Q13064 507 aaKnown RBP10.8□□□□□ -0.68
TOP2A-204ENST00000578412 RNF25Q96BH1 459 aaPredicted RBP10.8□□□□□ -0.68
TOP2A-204ENST00000578412 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
TOP2A-204ENST00000578412 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
TOP2A-204ENST00000578412 IRX5P78411 483 aaPredicted RBP10.79□□□□□ -0.68
TOP2A-204ENST00000578412 CABP2Q9NPB3 220 aa10.79□□□□□ -0.68
TOP2A-204ENST00000578412 OCEL1Q9H607 264 aa10.77□□□□□ -0.69
TOP2A-204ENST00000578412 PKD2Q13563 968 aa10.75□□□□□ -0.69
TOP2A-204ENST00000578412 FAM163AQ96GL9 167 aaPredicted RBP10.75□□□□□ -0.69
TOP2A-204ENST00000578412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.73□□□□□ -0.691e-10■■■□□ 14.6
TOP2A-204ENST00000578412 PCDH10Q9P2E7 1040 aa10.73□□□□□ -0.69
TOP2A-204ENST00000578412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.72□□□□□ -0.69
TOP2A-204ENST00000578412 ZFP91Q96JP5 570 aaPredicted RBP10.72□□□□□ -0.69
TOP2A-204ENST00000578412 VGFO15240 615 aaPredicted RBP10.71□□□□□ -0.69
TOP2A-204ENST00000578412 RGL2O15211 777 aa10.68□□□□□ -0.7
TOP2A-204ENST00000578412 EFCAB3Q8N7B9 438 aa10.68□□□□□ -0.7
TOP2A-204ENST00000578412 PDCD7Q8N8D1 485 aaKnown RBP10.68□□□□□ -0.7
TOP2A-204ENST00000578412 DPY19L2Q6NUT2 758 aa10.64□□□□□ -0.71
TOP2A-204ENST00000578412 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
TOP2A-204ENST00000578412 BCL11BQ9C0K0 894 aaPredicted RBP10.63□□□□□ -0.71
TOP2A-204ENST00000578412 STK24Q9Y6E0 443 aa10.63□□□□□ -0.71
TOP2A-204ENST00000578412 SLAIN1Q8ND83 568 aa10.62□□□□□ -0.71
TOP2A-204ENST00000578412 STK25O00506 426 aa10.61□□□□□ -0.71
TOP2A-204ENST00000578412 L3MBTL3Q96JM7 780 aaPredicted RBP10.6□□□□□ -0.71
TOP2A-204ENST00000578412 ILDR1Q86SU0 546 aaPredicted RBP10.59□□□□□ -0.71
TOP2A-204ENST00000578412 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.59□□□□□ -0.71
TOP2A-204ENST00000578412 ST18O60284 1047 aa10.58□□□□□ -0.72
TOP2A-204ENST00000578412 G3V3G9 751 aa10.57□□□□□ -0.72
TOP2A-204ENST00000578412 C3orf67Q6ZVT6 689 aa10.57□□□□□ -0.72
TOP2A-204ENST00000578412 SOX12O15370 315 aa10.56□□□□□ -0.72
TOP2A-204ENST00000578412 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
TOP2A-204ENST00000578412 BOLA1Q9Y3E2 137 aa10.54□□□□□ -0.72
TOP2A-204ENST00000578412 CDAN1Q8IWY9 1227 aa10.52□□□□□ -0.73
TOP2A-204ENST00000578412 MS4A4AQ96JQ5 239 aa10.5□□□□□ -0.73
TOP2A-204ENST00000578412 NLRP6P59044 892 aa10.48□□□□□ -0.73
TOP2A-204ENST00000578412 MFRPQ9BY79 579 aa10.47□□□□□ -0.73
TOP2A-204ENST00000578412 CHGAP10645 457 aaKnown RBP10.46□□□□□ -0.73
TOP2A-204ENST00000578412 FBXO22Q8NEZ5 403 aa10.45□□□□□ -0.74
TOP2A-204ENST00000578412 DCAF8L2P0C7V8 631 aa10.44□□□□□ -0.74
TOP2A-204ENST00000578412 MICALL2Q8IY33 904 aa10.44□□□□□ -0.74
TOP2A-204ENST00000578412 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
TOP2A-204ENST00000578412 HS6ST3Q8IZP7 471 aa10.41□□□□□ -0.74
TOP2A-204ENST00000578412 SNPHO15079 494 aa10.39□□□□□ -0.75
TOP2A-204ENST00000578412 MARVELD3Q96A59 401 aa10.36□□□□□ -0.75
TOP2A-204ENST00000578412 TMEM92Q6UXU6 159 aa10.35□□□□□ -0.75
TOP2A-204ENST00000578412 POTEB3A0JP26 581 aa10.33□□□□□ -0.76
TOP2A-204ENST00000578412 PPP1R37O75864 691 aa10.33□□□□□ -0.76
TOP2A-204ENST00000578412 POTEBQ6S5H4 581 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms